Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047332 Camellia sinensis var. sinensis HOM05D006652 ORTHO05D008645 7.6e-220 766.9 400 100.0
vmacro09218 Vaccinium macrocarpon HOM05D006652 ORTHO05D008645 2.8e-174 615.5 400 80.0
Dinv08786 Davidia involucrata HOM05D006652 ORTHO05D008645 3.2e-170 602.1 400 76.8
Lj8C103T10 Lonicera japonica HOM05D006652 ORTHO05D008645 1.1e-157 560.5 324 84.9
Hma1.2p1_0166F.1_g073540 Hydrangea macrophylla HOM05D006652 ORTHO05D008645 5.3e-157 558.1 398 73.6
GSVIVG01020686001 Vitis vinifera HOM05D006652 ORTHO05D008645 1.2e-156 557.0 379 74.9
TAR629G0548 Trochodendron aralioides HOM05D006652 ORTHO05D008645 4.5e-156 555.1 322 82.3
Nitab4.5_0000822g0100 Nicotiana tabacum HOM05D006652 ORTHO05D008645 6.5e-155 551.2 335 78.5
Peaxi162Scf00241g00812 Petunia axillaris HOM05D006652 ORTHO05D008645 6.5e-155 551.2 322 80.4
Lsat_1_v5_gn_8_140221 Lactuca sativa HOM05D006652 ORTHO05D008645 9.4e-154 547.4 322 82.0
Lj3g0009013 Lotus japonicus HOM05D006652 ORTHO05D008645 1.6e-153 546.6 320 81.2
Aqoxy4G00418 Aquilegia oxysepala HOM05D006652 ORTHO05D008645 1.4e-152 543.5 338 76.6
CiPaw.03G187000 Carya illinoinensis HOM05D006652 ORTHO05D008645 4.0e-152 542.0 329 79.9
Migut.H02157 Erythranthe guttata HOM05D006652 ORTHO05D008645 5.2e-152 541.6 321 80.1
HanXRQChr17g0558041 Helianthus annuus HOM05D006652 ORTHO05D008645 6.7e-152 541.2 322 79.8
QL08p041412 Quercus lobata HOM05D006652 ORTHO05D008645 3.3e-151 538.9 321 80.1
Nn1g04382 Nelumbo nucifera HOM05D006652 ORTHO05D008645 7.5e-151 537.7 320 80.3
Ca_18890_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 2.2e-150 536.2 331 77.3
Solyc10g008020.3 Solanum lycopersicum HOM05D006652 ORTHO05D008645 8.2e-150 534.3 323 78.0
Medtr4g079750 Medicago truncatula HOM05D006652 ORTHO05D008645 1.1e-149 533.9 320 78.4
CAN.G782.5 Capsicum annuum HOM05D006652 ORTHO05D008645 1.4e-149 533.5 322 78.3
MSTRG.14312 Avicennia marina HOM05D006652 ORTHO05D008645 3.1e-149 532.3 322 79.2
Sopen10g003890 Solanum pennellii HOM05D006652 ORTHO05D008645 4.1e-149 531.9 323 77.7
arahy.Tifrunner.gnm1.ann1.KP1SVS Arachis hypogaea HOM05D006652 ORTHO05D008645 9.1e-149 530.8 320 79.1
Nitab4.5_0008146g0020 Nicotiana tabacum HOM05D006652 ORTHO05D008645 2.0e-148 529.6 337 75.7
AUR62038922 Chenopodium quinoa HOM05D006652 ORTHO05D008645 4.5e-148 528.5 320 79.4
Hund07829 Selenicereus undatus HOM05D006652 ORTHO05D008645 5.9e-148 528.1 320 78.8
arahy.Tifrunner.gnm1.ann1.5ZDL5Q Arachis hypogaea HOM05D006652 ORTHO05D008645 1.0e-147 527.3 320 78.4
ECA234G1589 Erigeron canadensis HOM05D006652 ORTHO05D008645 1.1e-146 523.9 325 76.9
Potri.019G089700 Populus trichocarpa HOM05D006652 ORTHO05D008645 1.1e-146 523.9 334 74.3
SalBow7G3656 Salvia bowleyana HOM05D006652 ORTHO05D008645 1.5e-146 523.5 325 77.2
Glyma.12G122700 Glycine max HOM05D006652 ORTHO05D008645 5.5e-146 521.5 320 77.2
Phvul.011G134400 Phaseolus vulgaris HOM05D006652 ORTHO05D008645 7.2e-146 521.2 320 76.6
EL10Ac9g20915 Beta vulgaris HOM05D006652 ORTHO05D008645 1.6e-145 520.0 320 77.8
Glyma.06G283400 Glycine max HOM05D006652 ORTHO05D008645 1.0e-144 517.3 320 75.9
Lalb_Chr19g0134921 Lupinus albus HOM05D006652 ORTHO05D008645 1.0e-144 517.3 327 74.9
VMungo1127G0176 Vigna mungo HOM05D006652 ORTHO05D008645 5.2e-144 515.0 334 73.7
Ciclev10015734m.g Citrus clementina HOM05D006652 ORTHO05D008645 1.2e-143 513.8 322 76.7
Sabra19G0100100 Salix brachista HOM05D006652 ORTHO05D008645 3.4e-143 512.3 334 72.5
Sabra19G0103300 Salix brachista HOM05D006652 ORTHO05D008645 4.4e-143 511.9 334 72.2
Atru.chr6.2810_Atru.chr6.2811 Acer truncatum HOM05D006652 ORTHO05D008645 7.5e-143 511.1 393 67.7
unitig_21.g20276 Utricularia gibba HOM05D006652 ORTHO05D008645 8.3e-142 507.7 334 72.8
Actinidia39342 Actinidia chinensis HOM05D006652 ORTHO05D008645 1.1e-141 507.3 279 88.2
Gohir.A10G153800 Gossypium hirsutum HOM05D006652 ORTHO05D008645 1.8e-141 506.5 321 74.5
Gohir.D10G112300 Gossypium hirsutum HOM05D006652 ORTHO05D008645 2.4e-141 506.1 321 74.1
Gorai.011G124200 Gossypium raimondii HOM05D006652 ORTHO05D008645 2.4e-141 506.1 321 74.1
Thecc.01G148700 Theobroma cacao HOM05D006652 ORTHO05D008645 3.1e-141 505.8 399 64.9
COL.COLO4_33547 Corchorus olitorius HOM05D006652 ORTHO05D008645 7.0e-141 504.6 394 64.7
Os10g0181600 Oryza sativa ssp. japonica HOM05D006652 ORTHO05D008645 9.1e-141 504.2 321 74.5
Glyma.06G283600 Glycine max HOM05D006652 ORTHO05D008645 1.0e-139 500.7 320 72.8
Eucgr.K01102 Eucalyptus grandis HOM05D006652 ORTHO05D008645 5.0e-139 498.4 322 71.4
Duzib187G0644 Durio zibethinus HOM05D006652 ORTHO05D008645 1.9e-138 496.5 397 64.5
PGSC0003DMG400010544 Solanum tuberosum HOM05D006652 ORTHO05D008645 9.4e-138 494.2 386 64.5
Zm00001eb223890 Zea mays HOM05D006652 ORTHO05D008645 6.1e-137 491.5 321 73.5
Rhsim04G0074100 Rhododendron simsii HOM05D006652 ORTHO05D008645 1.8e-136 490.0 330 75.8
PGR142G2816 Punica granatum HOM05D006652 ORTHO05D008645 2.3e-136 489.6 322 70.2
CsaV3_6G018460 Cucumis sativus L. HOM05D006652 ORTHO05D008645 4.4e-135 485.3 343 68.8
ATR0661G163 Amborella trichopoda HOM05D006652 ORTHO05D008645 5.7e-135 485.0 335 68.4
SGA_v2.0_scaffold109G31132 Striga asiatica HOM05D006652 ORTHO05D008645 2.8e-134 482.6 436 59.2
MBI11_g14404_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 1.5e-130 470.3 325 72.9
Cc05_g08190 Coffea canephora HOM05D006652 ORTHO05D008645 5.4e-125 451.8 353 66.9
Cc05_g08160 Coffea canephora HOM05D006652 ORTHO05D008645 1.6e-124 450.3 351 66.4
AUR62038997 Chenopodium quinoa HOM05D006652 ORTHO05D008645 1.2e-121 440.7 334 68.0
TWI59G0297 Tripterygium wilfordii HOM05D006652 ORTHO05D008645 4.7e-121 438.7 266 78.2
Manes.13G137800 Manihot esculenta HOM05D006652 ORTHO05D008645 3.1e-120 436.0 299 68.9
Psat7g166280 Pisum sativum HOM05D006652 ORTHO05D008645 9.8e-119 431.0 270 75.9
Pp3c3_7460 Physcomitrium patens HOM05D006652 ORTHO05D008645 3.0e-115 419.5 322 62.7
Glyma.06G283500 Glycine max HOM05D006652 ORTHO05D008645 7.5e-111 404.8 290 68.6
Sed0018596 Sechium edule HOM05D006652 ORTHO05D008645 1.4e-109 400.6 277 67.9
SMO334G0043 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 1.4e-109 400.6 325 60.6
CDE11G0921 Ceratophyllum demersum HOM05D006652 ORTHO05D008645 1.1e-106 391.0 267 68.2
Mapoly0061s0036 Marchantia polymorpha HOM05D006652 ORTHO05D008645 7.1e-101 371.7 318 54.4
DCAR_013062 Daucus carota HOM05D006652 ORTHO05D008645 2.1e-100 370.2 320 63.1
MBI11_g19676_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 1.1e-93 347.8 277 63.5
ClCG02G017930 Citrullus lanatus HOM05D006652 ORTHO05D008645 9.3e-93 344.7 327 56.3
Cc00_g35820 Coffea canephora HOM05D006652 ORTHO05D008645 9.3e-85 318.2 201 76.1
MCO11G400 Micromonas commoda HOM05D006652 ORTHO05D008645 9.0e-80 301.6 334 48.5
CBR_g20425 Chara braunii HOM05D006652 ORTHO05D008645 6.4e-78 295.4 342 42.7
TPR.G21861 Trifolium pratense HOM05D006652 ORTHO05D008645 1.1e-77 294.7 195 71.8
Ca_18889_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 1.2e-76 291.2 187 74.3
Zm00001eb307930 Zea mays HOM05D006652 ORTHO05D008645 3.0e-75 286.6 205 66.3
AagrBONN_evm.TU.Sc2ySwM_228.444 Anthoceros agrestis HOM05D006652 ORTHO05D008645 9.6e-74 281.6 226 61.9
PRCOL_00002204 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 5.3e-72 275.8 320 46.6
MELO3C019759.2 Cucumis melo HOM05D006652 ORTHO05D008645 2.0e-71 273.9 197 68.5
PGR142G0648 Punica granatum HOM05D006652 ORTHO05D008645 1.2e-68 264.6 211 59.2
CBR_g20426 Chara braunii HOM05D006652 ORTHO05D008645 1.6e-65 254.2 396 36.1
Zm00001eb155780 Zea mays HOM05D006652 ORTHO05D008645 1.0e-62 245.0 262 51.1
Mapoly0285s0004 Marchantia polymorpha HOM05D006652 ORTHO05D008645 1.7e-62 244.2 220 55.0
Zm00001eb127120 Zea mays HOM05D006652 ORTHO05D008645 2.9e-62 243.4 253 53.0
Zm00001eb202810 Zea mays HOM05D006652 ORTHO05D008645 2.9e-62 243.4 257 51.8
Cre03.g200350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 1.6e-60 237.7 330 40.6
SMO118G0546 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 8.5e-54 215.3 303 38.6
Pp3c17_23540 Physcomitrium patens HOM05D006652 ORTHO05D008645 6.1e-52 209.1 303 37.3
Haze_13351 Corylus avellana HOM05D006652 ORTHO05D008645 2.2e-49 200.7 120 78.3
Mapoly0050s0024 Marchantia polymorpha HOM05D006652 ORTHO05D008645 3.1e-48 196.8 304 36.2
arahy.Tifrunner.gnm1.ann1.MYHL2J Arachis hypogaea HOM05D006652 ORTHO05D008645 9.1e-48 195.3 141 66.7
Cre06.g259401 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 9.1e-48 195.3 305 37.4
SEGI_35274 Sequoiadendron giganteum HOM05D006652 ORTHO05D008645 4.5e-47 193.0 307 37.8
CBR_g34298 Chara braunii HOM05D006652 ORTHO05D008645 5.0e-46 189.5 312 36.9
Haze_13350 Corylus avellana HOM05D006652 ORTHO05D008645 3.3e-42 176.8 94 90.4
Ca_18891_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 9.7e-42 175.3 109 75.2
Zm00001eb272210 Zea mays HOM05D006652 ORTHO05D008645 1.3e-38 164.9 203 47.3
PRCOL_00006996 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 1.5e-37 161.4 314 34.7
MCO08G076 Micromonas commoda HOM05D006652 ORTHO05D008645 1.2e-36 158.3 318 31.8
ECA234G0151 Erigeron canadensis HOM05D006652 ORTHO05D008645 4.7e-36 156.4 124 62.1
TPR.G21859 Trifolium pratense HOM05D006652 ORTHO05D008645 6.7e-35 152.5 138 56.5
AUR62024835 Chenopodium quinoa HOM05D006652 ORTHO05D008645 2.0e-34 151.0 142 57.0
TPR.G21704 Trifolium pratense HOM05D006652 ORTHO05D008645 9.7e-34 148.7 128 57.8
AagrBONN_evm.TU.Sc2ySwM_117.2543 Anthoceros agrestis HOM05D006652 ORTHO05D008645 4.0e-27 126.7 180 38.3
Glyma.12G122501 Glycine max HOM05D006652 ORTHO05D008645 5.5e-21 106.3 87 59.8
Cc05_g08180 Coffea canephora HOM05D006652 ORTHO05D008645 6.1e-20 102.8 56 85.7
Cc05_g08150 Coffea canephora HOM05D006652 ORTHO05D008645 3.0e-19 100.5 56 83.9
PRCOL_00001996 Prasinoderma coloniale HOM05D006652 ORTHO05D028803 2.8e-17 94.0 249 27.7
MCO09G339 Micromonas commoda HOM05D006652 ORTHO05D268879 1.1e-13 82.0 244 26.6
Ah.07g202300 Amaranthus hybridus HOM05D006652 ORTHO05D008645 6.1e-12 76.3 59 62.7
Zm00001eb048070 Zea mays HOM05D001272 ORTHO05D001099 8.0e-12 75.9 54 68.5
MCO15G420 Micromonas commoda HOM05D006652 ORTHO05D028803 1.4e-11 75.1 233 24.0
Ah.08g222620 Amaranthus hybridus HOM05D006652 ORTHO05D008645 1.2e-10 72.0 60 55.0
PRCOL_00002129 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 1.7e-09 68.2 242 26.0
Haze_13352 Corylus avellana HOM05D006652 ORTHO05D008645 3.2e-08 63.9 43 62.8
SMO358G0637 Selaginella moellendorffii HOM05D005748 ORTHO05D007123 9.2e-08 62.4 116 33.6
BcaB03g11936 Brassica carinata HOM05D005748 ORTHO05D007123 5.9e-07 59.7 234 29.1
Aqoxy6G01753 Aquilegia oxysepala HOM05D003793 ORTHO05D004471 6.6e-06 56.2 146 34.9


User provided reference genes

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