Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047325 Camellia sinensis var. sinensis HOM05D006721 ORTHO05D000476 1.1e-57 226.5 118 100.0
Actinidia38949 Actinidia chinensis HOM05D006721 ORTHO05D000476 9.8e-43 176.8 116 79.3
Actinidia34741 Actinidia chinensis HOM05D006721 ORTHO05D000476 4.9e-42 174.5 117 77.8
vmacro10349 Vaccinium macrocarpon HOM05D006721 ORTHO05D000476 7.8e-40 167.2 113 77.0
Dinv14631 Davidia involucrata HOM05D006721 ORTHO05D000476 6.6e-39 164.1 101 80.2
GSVIVG01036217001 Vitis vinifera HOM05D006721 ORTHO05D000476 3.3e-38 161.8 106 79.2
HanXRQChr11g0322821 Helianthus annuus HOM05D006721 ORTHO05D000476 1.6e-37 159.5 106 76.4
Dinv18276 Davidia involucrata HOM05D006721 ORTHO05D000476 3.6e-37 158.3 99 81.8
Atru.chr2.886 Acer truncatum HOM05D006721 ORTHO05D000476 4.7e-37 157.9 106 77.4
Ciclev10022930m.g Citrus clementina HOM05D006721 ORTHO05D000476 6.2e-37 157.5 106 78.3
Lsat_1_v5_gn_2_107641 Lactuca sativa HOM05D006721 ORTHO05D000476 6.2e-37 157.5 107 74.8
Manes.09G149900 Manihot esculenta HOM05D006721 ORTHO05D000476 1.4e-36 156.4 106 76.4
Oeu058331.1 Olea europaea HOM05D006721 ORTHO05D000476 1.4e-36 156.4 104 76.9
ECA238G3797 Erigeron canadensis HOM05D006721 ORTHO05D000476 1.8e-36 156.0 115 70.4
Haze_04466 Corylus avellana HOM05D006721 ORTHO05D000476 2.3e-36 155.6 108 79.6
QL01p041965 Quercus lobata HOM05D006721 ORTHO05D000476 2.3e-36 155.6 102 81.4
Cpa.g.sc162.11 Carica papaya HOM05D006721 ORTHO05D000476 4.0e-36 154.8 108 73.1
Migut.F00814 Erythranthe guttata HOM05D006721 ORTHO05D000476 4.0e-36 154.8 101 76.2
Eucgr.B02129 Eucalyptus grandis HOM05D006721 ORTHO05D000476 5.2e-36 154.5 100 79.0
Potri.019G014100 Populus trichocarpa HOM05D006721 ORTHO05D000476 5.2e-36 154.5 106 76.4
PGR142G1199 Punica granatum HOM05D006721 ORTHO05D000476 5.2e-36 154.5 106 77.4
Cc02_g09090 Coffea canephora HOM05D006721 ORTHO05D000476 1.5e-35 152.9 103 74.8
Nn1g02669 Nelumbo nucifera HOM05D006721 ORTHO05D000476 1.5e-35 152.9 106 75.5
QL03p032184 Quercus lobata HOM05D006721 ORTHO05D000476 1.5e-35 152.9 102 80.4
QL03p032281 Quercus lobata HOM05D006721 ORTHO05D000476 1.5e-35 152.9 102 80.4
EL10Ac4g09049 Beta vulgaris HOM05D006721 ORTHO05D000476 4.4e-35 151.4 109 69.7
Nitab4.5_0000930g0080 Nicotiana tabacum HOM05D006721 ORTHO05D000476 5.8e-35 151.0 97 80.4
Glyma.03G251900 Glycine max HOM05D006721 ORTHO05D000476 1.3e-34 149.8 108 74.1
Sabra19G0016300 Salix brachista HOM05D006721 ORTHO05D000476 1.3e-34 149.8 106 74.5
Sabra19G0026800 Salix brachista HOM05D006721 ORTHO05D000476 1.3e-34 149.8 106 74.5
Lj1g0023872 Lotus japonicus HOM05D006721 ORTHO05D000476 2.2e-34 149.1 109 74.3
Hund06940 Selenicereus undatus HOM05D006721 ORTHO05D000476 2.9e-34 148.7 106 67.0
Ah.04g163750 Amaranthus hybridus HOM05D006721 ORTHO05D000476 3.8e-34 148.3 105 71.4
MSTRG.9005 Avicennia marina HOM05D006721 ORTHO05D000476 3.8e-34 148.3 105 71.4
CiPaw.07G077700 Carya illinoinensis HOM05D006721 ORTHO05D000476 3.8e-34 148.3 108 74.1
Phvul.006G106600 Phaseolus vulgaris HOM05D006721 ORTHO05D000476 3.8e-34 148.3 108 74.1
Aqoxy2G03596 Aquilegia oxysepala HOM05D006721 ORTHO05D000476 4.9e-34 147.9 106 74.5
THA.LOC104808031 Tarenaya hassleriana HOM05D006721 ORTHO05D000476 6.4e-34 147.5 107 74.8
AUR62001066 Chenopodium quinoa HOM05D006721 ORTHO05D000476 8.4e-34 147.1 109 66.1
COL.COLO4_15417 Corchorus olitorius HOM05D006721 ORTHO05D000476 8.4e-34 147.1 98 76.5
CsaV3_2G003760 Cucumis sativus L. HOM05D006721 ORTHO05D000476 8.4e-34 147.1 107 69.2
SGA_v2.0_scaffold90G27702 Striga asiatica HOM05D006721 ORTHO05D000476 1.1e-33 146.7 105 70.5
Peaxi162Scf00135g00914 Petunia axillaris HOM05D006721 ORTHO05D000476 1.4e-33 146.4 97 78.4
Sed0018278 Sechium edule HOM05D006721 ORTHO05D000476 3.2e-33 145.2 107 68.2
TWI56G0396 Tripterygium wilfordii HOM05D006721 ORTHO05D000476 4.1e-33 144.8 108 71.3
TAR365G0041 Trochodendron aralioides HOM05D006721 ORTHO05D000476 5.4e-33 144.4 106 72.6
Nitab4.5_0002651g0060 Nicotiana tabacum HOM05D006721 ORTHO05D000476 7.1e-33 144.1 109 71.6
Sopen04g004980 Solanum pennellii HOM05D006721 ORTHO05D000476 7.1e-33 144.1 100 73.0
Gohir.A13G168900 Gossypium hirsutum HOM05D006721 ORTHO05D000476 9.2e-33 143.7 105 71.4
Gohir.D13G174300 Gossypium hirsutum HOM05D006721 ORTHO05D000476 9.2e-33 143.7 105 71.4
Gorai.013G186500 Gossypium raimondii HOM05D006721 ORTHO05D000476 9.2e-33 143.7 105 71.4
HPP92_000759 Vanilla planifolia HOM05D006721 ORTHO05D000476 9.2e-33 143.7 108 70.4
AUR62004887 Chenopodium quinoa HOM05D006721 ORTHO05D000476 1.6e-32 142.9 109 65.1
Lalb_Chr04g0262001 Lupinus albus HOM05D006721 ORTHO05D000476 1.6e-32 142.9 108 72.2
Medtr7g116300 Medicago truncatula HOM05D006721 ORTHO05D000476 2.1e-32 142.5 106 71.7
TPR.G6950 Trifolium pratense HOM05D006721 ORTHO05D000476 2.7e-32 142.1 106 71.7
PGSC0003DMG400025428 Solanum tuberosum HOM05D006721 ORTHO05D000476 3.5e-32 141.7 100 71.0
Thecc.05G276800 Theobroma cacao HOM05D006721 ORTHO05D000476 3.5e-32 141.7 106 71.7
Carub.0003s2825 Capsella rubella HOM05D006721 ORTHO05D000476 4.6e-32 141.4 101 72.3
Sp3g27300 Schrenkiella parvula HOM05D006721 ORTHO05D000476 6.0e-32 141.0 100 73.0
CAN.G186.72 Capsicum annuum HOM05D006721 ORTHO05D000476 7.8e-32 140.6 100 72.0
Psat3g006080 Pisum sativum HOM05D006721 ORTHO05D000476 7.8e-32 140.6 106 70.8
CARHR104660 Cardamine hirsuta HOM05D006721 ORTHO05D000476 1.0e-31 140.2 100 71.0
Aa31LG8G12480 Aethionema arabicum HOM05D006721 ORTHO05D000476 1.3e-31 139.8 107 71.0
A03p45120 Brassica napus HOM05D006721 ORTHO05D000476 3.0e-31 138.7 97 74.2
BraA03t13647Z Brassica rapa HOM05D006721 ORTHO05D000476 3.0e-31 138.7 97 74.2
Gorai.008G193300 Gossypium raimondii HOM05D006721 ORTHO05D000476 3.0e-31 138.7 105 69.5
ATR0665G282 Amborella trichopoda HOM05D006721 ORTHO05D000476 3.9e-31 138.3 94 73.4
Prupe.6G347400 Prunus persica HOM05D006721 ORTHO05D000476 3.9e-31 138.3 89 80.9
AT2G14045 Arabidopsis thaliana HOM05D006721 ORTHO05D000476 6.6e-31 137.5 100 71.0
PSO210G7245 Papaver somniferum HOM05D006721 ORTHO05D000476 6.6e-31 137.5 110 70.0
Cfa006323 Carpinus fangiana HOM05D006721 ORTHO05D000476 8.6e-31 137.1 86 82.6
FAN05G3615 Fragaria x ananassa HOM05D004756 ORTHO05D005793 8.6e-31 137.1 99 71.7
Gohir.D12G180151 Gossypium hirsutum HOM05D006721 ORTHO05D000476 8.6e-31 137.1 105 70.5
Thhalv10023143m.g Eutrema salsugineum HOM05D006721 ORTHO05D000476 1.1e-30 136.7 100 70.0
PSO832G0589 Papaver somniferum HOM05D006721 ORTHO05D000476 1.1e-30 136.7 109 68.8
RcHm_v2.0_Chr3g0450141 Rosa chinensis HOM05D006721 ORTHO05D000476 1.5e-30 136.3 98 72.4
CDE06G1546 Ceratophyllum demersum HOM05D006721 ORTHO05D000476 3.3e-30 135.2 99 70.7
FvH4_6g02371 Fragaria vesca HOM05D006721 ORTHO05D000476 3.3e-30 135.2 98 71.4
FAN02G4370 Fragaria x ananassa HOM05D006721 ORTHO05D000476 3.3e-30 135.2 98 71.4
FAN05G5208 Fragaria x ananassa HOM05D006721 ORTHO05D000476 3.3e-30 135.2 98 71.4
FAN14G0694 Fragaria x ananassa HOM05D004756 ORTHO05D005793 3.3e-30 135.2 98 71.4
FAN14G4094 Fragaria x ananassa HOM05D004756 ORTHO05D005793 3.3e-30 135.2 98 71.4
BcaC01g03109 Brassica carinata HOM05D006721 ORTHO05D000476 9.6e-30 133.7 106 69.8
C03p55970 Brassica napus HOM05D006721 ORTHO05D000476 9.6e-30 133.7 106 69.8
BolC3t17881H Brassica oleracea HOM05D006721 ORTHO05D000476 9.6e-30 133.7 106 69.8
Sc15g0002500 Simmondsia chinensis HOM05D006721 ORTHO05D000476 9.6e-30 133.7 82 81.7
Os07g0185800 Oryza sativa ssp. japonica HOM05D006721 ORTHO05D000476 1.6e-29 132.9 89 73.0
Zm00001eb301780 Zea mays HOM05D006721 ORTHO05D000476 1.6e-29 132.9 87 73.6
CANSAT54G3036 Cannabis sativa HOM05D006721 ORTHO05D000476 2.1e-29 132.5 108 66.7
MBI19_g37090_MAGBIO Magnolia biondii HOM05D006721 ORTHO05D000476 2.1e-29 132.5 108 67.6
MD12G1244800 Malus domestica HOM05D006721 ORTHO05D000476 2.8e-29 132.1 101 70.3
AL3G45710 Arabidopsis lyrata HOM05D006721 ORTHO05D000476 5.2e-28 127.9 111 63.1
GSVIVG01014622001 Vitis vinifera HOM05D006721 ORTHO05D000476 1.2e-27 126.7 80 78.8
Ca_09468_v3 Cicer arietinum L. HOM05D006721 ORTHO05D000476 2.6e-27 125.6 106 67.0
GSVIVG01015127001 Vitis vinifera HOM05D006721 ORTHO05D000476 4.4e-27 124.8 82 76.8
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 6.0e-24 114.4 100 62.0
Duzib128G0372 Durio zibethinus HOM05D006721 ORTHO05D000476 5.1e-23 111.3 98 62.2
SMO367G0192 Selaginella moellendorffii HOM05D001348 ORTHO05D002788 7.3e-22 107.5 85 63.5
Mapoly0013s0055 Marchantia polymorpha HOM05D006721 ORTHO05D000476 5.3e-20 101.3 84 58.3
arahy.Tifrunner.gnm1.ann1.DA1MAK Arachis hypogaea HOM05D006721 ORTHO05D000476 9.9e-19 97.1 83 62.7
arahy.Tifrunner.gnm1.ann1.P0L55B Arachis hypogaea HOM05D006721 ORTHO05D000476 9.9e-19 97.1 83 62.7
Pp3c7_11510 Physcomitrium patens HOM05D006721 ORTHO05D000476 1.3e-18 96.7 85 51.8
BraA09t38027Z Brassica rapa HOM05D006721 ORTHO05D000476 2.2e-18 95.9 82 63.4
BraA10t43135Z Brassica rapa HOM05D006721 ORTHO05D000476 2.2e-18 95.9 82 63.4
A07p07050 Brassica napus HOM05D006721 ORTHO05D000476 2.9e-18 95.5 76 67.1
BraA06t26268Z Brassica rapa HOM05D006721 ORTHO05D000476 3.8e-18 95.1 83 65.1
MELO3C004419.2 Cucumis melo HOM05D006721 ORTHO05D000476 1.9e-17 92.8 124 43.5
Rhsim09G0138600 Rhododendron simsii HOM05D006721 ORTHO05D000476 1.2e-16 90.1 71 67.6
CBR_g51472 Chara braunii HOM05D006721 ORTHO05D000476 1.9e-14 82.8 87 46.0
ClCG02G016980 Citrullus lanatus HOM05D006721 ORTHO05D000476 1.9e-14 82.8 112 42.9
FAN09G4219 Fragaria x ananassa HOM05D006721 ORTHO05D000476 1.9e-14 82.8 81 54.3
MCO10G233 Micromonas commoda HOM05D006721 ORTHO05D000476 4.3e-14 81.6 61 60.7
C07p11900 Brassica napus HOM05D006721 ORTHO05D000476 5.6e-14 81.3 71 67.6
A09p24350 Brassica napus HOM05D006721 ORTHO05D000476 9.6e-14 80.5 57 70.2
A01p30750 Brassica napus HOM05D001035 ORTHO05D000476 4.8e-13 78.2 57 68.4
BolC7t41661H Brassica oleracea HOM05D006721 ORTHO05D000476 4.0e-12 75.1 71 64.8
BcaB06g29605 Brassica carinata HOM05D001035 ORTHO05D021752 5.3e-12 74.7 57 63.2
PRCOL_00003504 Prasinoderma coloniale HOM05D006721 ORTHO05D000476 5.3e-12 74.7 76 50.0
Zm00001eb112450 Zea mays HOM05D006721 ORTHO05D000476 6.9e-12 74.3 49 67.3
DCAR_030976 Daucus carota HOM05D006721 ORTHO05D000476 4.5e-11 71.6 55 61.8
Cre02.g105950 Chlamydomonas reinhardtii HOM05D006721 ORTHO05D000476 1.3e-10 70.1 85 43.5
A05p09770 Brassica napus HOM05D006721 ORTHO05D000476 3.8e-10 68.6 48 70.8
SHI31376 Sapria himalayana HOM05D006721 ORTHO05D000476 6.7e-07 57.8 46 58.7
BolC5t30890H Brassica oleracea HOM05D000263 ORTHO05D028311 5.6e-06 54.7 41 63.4
C08p15110 Brassica napus HOM05D000263 ORTHO05D028311 7.4e-06 54.3 41 63.4
BolC8t49141H Brassica oleracea HOM05D000263 ORTHO05D028311 7.4e-06 54.3 41 63.4


User provided reference genes

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