Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047324 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.4e-54 213.8 104 100.0
CSS0030944 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.5e-21 105.5 72 70.8
CSS0031381 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.1e-19 97.8 72 62.5
CSS0004437 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.2e-13 78.2 55 70.9
Manes.18G145666 Manihot esculenta HOM05D000002 ORTHO05D000047 2.3e-11 72.4 64 54.7
ECA240G1646 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.1e-08 61.6 81 40.7
Gorai.008G098500 Gossypium raimondii HOM05D000002 ORTHO05D000047 1.5e-07 59.7 60 50.0
ECA248G3653 Erigeron canadensis HOM05D000492 ORTHO05D000001 1.0e-06 57.0 61 44.3
TAR546G0002 Trochodendron aralioides HOM05D000002 ORTHO05D017724 1.0e-06 57.0 60 46.7
ECA248G3776 Erigeron canadensis HOM05D000002 ORTHO05D000047 2.2e-06 55.8 61 44.3
ECA236G1075 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.9e-06 55.5 61 44.3
ECA247G0907 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.9e-06 55.5 61 44.3
ECA248G1949 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.9e-06 55.5 81 35.8
Prupe.1G241200 Prunus persica HOM05D000002 ORTHO05D000047 2.9e-06 55.5 56 44.6
Prupe.3G076700 Prunus persica HOM05D000002 ORTHO05D000047 2.9e-06 55.5 56 44.6
Prupe.6G115900 Prunus persica HOM05D000002 ORTHO05D000047 2.9e-06 55.5 56 44.6
Prupe.6G327500 Prunus persica HOM05D000002 ORTHO05D000047 2.9e-06 55.5 56 44.6
ECA238G4491 Erigeron canadensis HOM05D000002 ORTHO05D000047 3.8e-06 55.1 75 36.0
CSS0050489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.0e-06 54.7 81 33.3
ECA240G0332 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.0e-06 54.7 61 45.9
ECA233G0689 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.5e-06 54.3 61 44.3
CSS0000154 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 8.5e-06 53.9 54 50.0
Cpa.g.sc47.72 Carica papaya HOM05D000002 ORTHO05D000047 8.5e-06 53.9 81 39.5
ECA246G5135 Erigeron canadensis HOM05D000002 ORTHO05D000047 8.5e-06 53.9 64 40.6
ECA276G0003 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.5e-06 53.9 61 44.3


User provided reference genes

Program Settings