Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047313 Camellia sinensis var. sinensis HOM05D002969 ORTHO05D003308 0.0e+00 1586.2 795 100.0
CSS0043728 Camellia sinensis var. sinensis HOM05D002969 ORTHO05D003308 0.0e+00 1528.1 794 97.2
Actinidia32183 Actinidia chinensis HOM05D002969 ORTHO05D003308 0.0e+00 1274.2 804 80.3
Dinv30672 Davidia involucrata HOM05D002969 ORTHO05D003308 0.0e+00 1268.4 831 78.0
Dinv34332 Davidia involucrata HOM05D002969 ORTHO05D003308 0.0e+00 1268.4 831 78.0
Dinv04036 Davidia involucrata HOM05D002969 ORTHO05D003308 0.0e+00 1237.2 822 76.9
Rhsim08G0238100 Rhododendron simsii HOM05D002969 ORTHO05D003308 0.0e+00 1171.8 830 72.8
TAR626G1632 Trochodendron aralioides HOM05D002969 ORTHO05D003308 3.8e-308 1061.2 831 66.2
Oeu007563.1 Olea europaea HOM05D002969 ORTHO05D003308 5.8e-296 1020.8 797 65.9
Lj7C292T8 Lonicera japonica HOM05D002969 ORTHO05D003308 2.9e-295 1018.5 826 65.6
GSVIVG01016771001 Vitis vinifera HOM05D002969 ORTHO05D003308 1.1e-278 963.4 796 63.1
Nn7g36584 Nelumbo nucifera HOM05D002969 ORTHO05D003308 3.2e-278 961.8 836 61.1
Haze_16025 Corylus avellana HOM05D002969 ORTHO05D003308 2.6e-272 942.2 827 58.4
Cfa003537 Carpinus fangiana HOM05D002969 ORTHO05D003308 1.7e-271 939.5 827 58.5
Cc02_g14940 Coffea canephora HOM05D002969 ORTHO05D003308 5.6e-267 924.5 827 59.9
PSO447G0254 Papaver somniferum HOM05D002969 ORTHO05D003308 5.8e-264 914.4 835 58.3
QL05p007828 Quercus lobata HOM05D002969 ORTHO05D003308 6.4e-263 911.0 826 57.5
PSO210G6259 Papaver somniferum HOM05D002969 ORTHO05D003308 3.2e-262 908.7 831 58.0
MSTRG.10956 Avicennia marina HOM05D002969 ORTHO05D003308 1.4e-254 883.2 819 56.8
Lsat_1_v5_gn_5_75740 Lactuca sativa HOM05D002969 ORTHO05D003308 1.4e-254 883.2 810 57.3
DCAR_016128 Daucus carota HOM05D002969 ORTHO05D003308 4.6e-253 878.2 797 59.7
DCAR_022697 Daucus carota HOM05D002969 ORTHO05D003308 4.6e-253 878.2 827 57.3
Aqoxy7G01394 Aquilegia oxysepala HOM05D002969 ORTHO05D003308 8.2e-250 867.5 823 56.4
Lj5C38T4 Lonicera japonica HOM05D002969 ORTHO05D003308 1.3e-247 860.1 828 58.9
ECA247G3059 Erigeron canadensis HOM05D002969 ORTHO05D003308 4.6e-245 851.7 820 56.6
Peaxi162Scf00068g02519 Petunia axillaris HOM05D002969 ORTHO05D003308 5.7e-243 844.7 843 55.4
Nitab4.5_0000794g0160 Nicotiana tabacum HOM05D002969 ORTHO05D003308 1.4e-241 840.1 848 54.1
Migut.I01069 Erythranthe guttata HOM05D002969 ORTHO05D003308 1.2e-240 837.0 874 52.1
MELO3C006797.2 Cucumis melo HOM05D002969 ORTHO05D003308 6.9e-233 811.2 817 52.5
HanXRQChr10g0301861 Helianthus annuus HOM05D002969 ORTHO05D003308 6.9e-233 811.2 820 53.3
ECA240G4395 Erigeron canadensis HOM05D002969 ORTHO05D003308 1.2e-232 810.4 820 54.0
ClCG05G007230 Citrullus lanatus HOM05D002969 ORTHO05D003308 1.5e-232 810.1 848 51.4
SGA_v2.0_scaffold71G23857 Striga asiatica HOM05D002969 ORTHO05D003308 3.2e-230 802.4 896 50.9
Ciclev10024687m.g Citrus clementina HOM05D002969 ORTHO05D003308 1.0e-228 797.3 821 53.8
CsaV3_3G015990 Cucumis sativus L. HOM05D002969 ORTHO05D003308 2.2e-226 789.6 826 51.1
COL.COLO4_30764 Corchorus olitorius HOM05D002969 ORTHO05D003308 2.4e-225 786.2 882 50.9
Gorai.012G011500 Gossypium raimondii HOM05D002969 ORTHO05D003308 2.2e-223 779.6 828 52.2
PGR102G0955 Punica granatum HOM05D002969 ORTHO05D003308 2.2e-223 779.6 829 51.4
Lsat_1_v5_gn_1_38040 Lactuca sativa HOM05D002969 ORTHO05D003308 5.0e-223 778.5 853 50.5
Sed0027017 Sechium edule HOM05D002969 ORTHO05D003308 5.5e-222 775.0 844 50.5
Gohir.A05G405950 Gossypium hirsutum HOM05D002969 ORTHO05D003308 1.2e-221 773.9 828 51.8
TWI31G0668 Tripterygium wilfordii HOM05D002969 ORTHO05D003308 6.1e-221 771.5 825 51.3
Sopen09g004560 Solanum pennellii HOM05D002969 ORTHO05D003308 6.7e-220 768.1 827 51.6
Solyc09g009800.3 Solanum lycopersicum HOM05D002969 ORTHO05D003308 8.8e-220 767.7 827 51.5
Atru.chr1.3951 Acer truncatum HOM05D002969 ORTHO05D003308 8.2e-218 761.1 885 50.1
Eucgr.J02821 Eucalyptus grandis HOM05D002969 ORTHO05D003308 7.7e-216 754.6 832 49.9
SalBow6G7155 Salvia bowleyana HOM05D002969 ORTHO05D003308 1.7e-215 753.4 849 48.4
MD09G1184300 Malus domestica HOM05D002969 ORTHO05D003308 5.0e-215 751.9 829 49.6
Sc18g0005650 Simmondsia chinensis HOM05D002969 ORTHO05D003308 2.8e-210 736.1 846 48.6
RcHm_v2.0_Chr2g0145161 Rosa chinensis HOM05D002969 ORTHO05D003308 2.7e-205 719.5 829 48.6
THA.LOC104813957 Tarenaya hassleriana HOM05D002969 ORTHO05D003308 4.7e-205 718.8 833 48.1
Thecc.06G119100 Theobroma cacao HOM05D002969 ORTHO05D003308 8.0e-205 718.0 702 55.4
Duzib235G1299 Durio zibethinus HOM05D002969 ORTHO05D003308 5.2e-204 715.3 704 54.8
FvH4_6g34630 Fragaria vesca HOM05D002969 ORTHO05D003308 1.3e-202 710.7 842 48.1
FAN14G5519 Fragaria x ananassa HOM05D002969 ORTHO05D003308 1.3e-202 710.7 842 48.1
FAN09G2022 Fragaria x ananassa HOM05D002969 ORTHO05D003308 1.4e-201 707.2 842 47.9
Aa31LG7G2260 Aethionema arabicum HOM05D002969 ORTHO05D003308 1.8e-201 706.8 844 48.0
FAN05G1938 Fragaria x ananassa HOM05D002969 ORTHO05D003308 7.7e-200 701.4 842 48.0
EL10Ac9g22289 Beta vulgaris HOM05D002969 ORTHO05D003308 1.9e-198 696.8 893 48.6
BcaC06g35804 Brassica carinata HOM05D002969 ORTHO05D003308 4.2e-198 695.7 836 47.1
BolC7t41532H Brassica oleracea HOM05D002969 ORTHO05D003308 4.2e-198 695.7 836 47.1
AUR62010285 Chenopodium quinoa HOM05D002969 ORTHO05D003308 5.5e-198 695.3 844 49.1
C07p10660 Brassica napus HOM05D002969 ORTHO05D003308 1.6e-197 693.7 836 47.0
A07p07070 Brassica napus HOM05D002969 ORTHO05D003308 2.8e-197 693.0 839 46.6
BraA07t28494Z Brassica rapa HOM05D002969 ORTHO05D003308 2.8e-197 693.0 839 46.6
Potri.003G064000 Populus trichocarpa HOM05D002969 ORTHO05D003308 4.7e-197 692.2 840 48.2
ATR0618G078 Amborella trichopoda HOM05D002969 ORTHO05D003308 2.3e-196 689.9 825 48.0
CANSAT54G2721 Cannabis sativa HOM05D002969 ORTHO05D003308 4.0e-196 689.1 835 46.5
Sp3g22890 Schrenkiella parvula HOM05D002969 ORTHO05D003308 4.0e-196 689.1 841 46.7
BcaB06g26734 Brassica carinata HOM05D002969 ORTHO05D003308 4.4e-195 685.6 839 46.4
Carub.0001s1721 Capsella rubella HOM05D002969 ORTHO05D003308 1.1e-193 681.0 841 46.3
AL1G29730 Arabidopsis lyrata HOM05D002969 ORTHO05D003308 4.1e-193 679.1 841 46.5
SEGI_24599 Sequoiadendron giganteum HOM05D002969 ORTHO05D003308 2.7e-192 676.4 721 51.7
CARHR018040 Cardamine hirsuta HOM05D002969 ORTHO05D003308 5.9e-192 675.2 829 47.2
Sabra03G0037600 Salix brachista HOM05D002969 ORTHO05D003308 1.7e-191 673.7 849 46.6
Thhalv10017997m.g Eutrema salsugineum HOM05D002969 ORTHO05D003308 4.3e-190 669.1 833 46.5
Ah.01g018180 Amaranthus hybridus HOM05D002969 ORTHO05D003308 2.1e-189 666.8 842 45.8
TWI31G0627 Tripterygium wilfordii HOM05D002969 ORTHO05D003308 1.2e-187 661.0 829 46.2
AT1G17450 Arabidopsis thaliana HOM05D002969 ORTHO05D003308 7.5e-187 658.3 847 45.0
Peaxi162Scf00006g00210 Petunia axillaris HOM05D002969 ORTHO05D003308 6.2e-181 638.6 704 52.1
AL2G17610 Arabidopsis lyrata HOM05D002969 ORTHO05D003308 3.4e-179 632.9 802 46.3
Carub.0002s0593 Capsella rubella HOM05D002969 ORTHO05D003308 4.1e-177 625.9 826 46.1
Glyma.02G000100 Glycine max HOM05D002969 ORTHO05D003308 1.3e-167 594.3 833 43.5
Cfa003558 Carpinus fangiana HOM05D002969 ORTHO05D003308 2.3e-167 593.6 662 48.5
SMO119G0293 Selaginella moellendorffii HOM05D002969 ORTHO05D003308 8.6e-167 591.7 830 42.7
arahy.Tifrunner.gnm1.ann1.MA4BJF Arachis hypogaea HOM05D002969 ORTHO05D003308 4.3e-166 589.3 818 42.1
Glyma.19G263900 Glycine max HOM05D002969 ORTHO05D003308 7.3e-166 588.6 831 43.2
arahy.Tifrunner.gnm1.ann1.8DY1VB Arachis hypogaea HOM05D002969 ORTHO05D003308 2.4e-164 583.6 818 41.9
Ah.01g009920 Amaranthus hybridus HOM05D002969 ORTHO05D003308 7.6e-163 578.6 821 44.2
Lalb_Chr10g0094641 Lupinus albus HOM05D002969 ORTHO05D003308 1.9e-161 573.9 828 42.8
Duzib192G0334 Durio zibethinus HOM05D002969 ORTHO05D003308 4.2e-161 572.8 802 43.8
Thecc.06G115400 Theobroma cacao HOM05D002969 ORTHO05D003308 7.8e-160 568.5 850 42.6
Phvul.007G234600 Phaseolus vulgaris HOM05D002969 ORTHO05D003308 1.3e-159 567.8 809 42.9
FAN02G4452 Fragaria x ananassa HOM05D002969 ORTHO05D003308 1.7e-159 567.4 803 42.7
Ca_13957_v3 Cicer arietinum L. HOM05D002969 ORTHO05D003308 1.5e-158 564.3 833 42.9
Zm00001eb254660 Zea mays HOM05D002969 ORTHO05D003308 1.6e-157 560.8 806 41.2
Haze_15990 Corylus avellana HOM05D002969 ORTHO05D003308 4.8e-157 559.3 664 47.4
HPP92_011313 Vanilla planifolia HOM05D002969 ORTHO05D003308 8.1e-157 558.5 811 42.2
AUR62039104 Chenopodium quinoa HOM05D002969 ORTHO05D003308 3.4e-155 553.1 812 44.1
Lj3g0017600 Lotus japonicus HOM05D002969 ORTHO05D003308 3.4e-155 553.1 825 42.2
Os02g0633100 Oryza sativa ssp. japonica HOM05D002969 ORTHO05D003308 3.4e-155 553.1 806 42.4
TPR.G14707 Trifolium pratense HOM05D002969 ORTHO05D003308 8.4e-154 548.5 822 42.1
Mapoly0002s0195 Marchantia polymorpha HOM05D002969 ORTHO05D003308 1.4e-153 547.7 833 38.8
Psat1g003120 Pisum sativum HOM05D002969 ORTHO05D003308 4.2e-153 546.2 816 40.9
Glyma.16G219900 Glycine max HOM05D002969 ORTHO05D003308 6.6e-151 538.9 826 42.0
Medtr3g005240 Medicago truncatula HOM05D002969 ORTHO05D003308 1.5e-150 537.7 821 41.4
Pp3c4_16500 Physcomitrium patens HOM05D002969 ORTHO05D003308 2.5e-150 537.0 823 40.9
TPR.G25535 Trifolium pratense HOM05D002969 ORTHO05D003308 3.4e-147 526.6 830 40.2
Prupe.3G042500 Prunus persica HOM05D002969 ORTHO05D003308 3.9e-143 513.1 574 51.2
Gohir.D04G009700 Gossypium hirsutum HOM05D002969 ORTHO05D003308 8.7e-143 511.9 570 50.5
Cpa.g.sc34.72 Carica papaya HOM05D002969 ORTHO05D003308 3.7e-141 506.5 547 52.5
MBI06_g12843_MAGBIO Magnolia biondii HOM05D002969 ORTHO05D003308 1.2e-139 501.5 543 53.8
SMO196G0130 Selaginella moellendorffii HOM05D002969 ORTHO05D003308 3.4e-139 500.0 802 38.7
Manes.11G021000 Manihot esculenta HOM05D002969 ORTHO05D003308 1.7e-138 497.7 584 50.0
SHI10580 Sapria himalayana HOM05D002969 ORTHO05D000023 2.9e-138 496.9 867 39.9
AT1G59470 Arabidopsis thaliana HOM05D002969 ORTHO05D003308 1.0e-135 488.4 702 41.5
AagrBONN_evm.TU.Sc2ySwM_344.4533 Anthoceros agrestis HOM05D002969 ORTHO05D003308 3.3e-134 483.4 825 36.0
vmacro15027 Vaccinium macrocarpon HOM05D002969 ORTHO05D003308 3.1e-132 476.9 303 77.9
PSO017G0852 Papaver somniferum HOM05D002969 ORTHO05D003308 1.9e-129 467.6 539 49.5
Zm00001eb254750 Zea mays HOM05D002969 ORTHO05D003308 3.2e-129 466.8 664 42.2
COL.COLO4_30698 Corchorus olitorius HOM05D002969 ORTHO05D003308 6.3e-125 452.6 640 43.3
MBI06_g22353_MAGBIO Magnolia biondii HOM05D002969 ORTHO05D003308 2.1e-120 437.6 374 60.7
Nitab4.5_0010825g0010 Nicotiana tabacum HOM05D002969 ORTHO05D003308 1.5e-118 431.4 814 36.4
MBI06_g44919_MAGBIO Magnolia biondii HOM05D002969 ORTHO05D003308 2.1e-112 411.0 455 53.4
vmacro15024 Vaccinium macrocarpon HOM05D002969 ORTHO05D003308 2.4e-108 397.5 262 75.6
Os02g0316900 Oryza sativa ssp. japonica HOM05D002969 ORTHO05D003308 7.0e-100 369.4 615 37.2
Gohir.A06G192400 Gossypium hirsutum HOM05D002969 ORTHO05D003308 2.9e-98 364.0 804 34.0
Gorai.010G233800 Gossypium raimondii HOM05D002969 ORTHO05D003308 3.2e-97 360.5 809 33.9
CiPaw.01G219300 Carya illinoinensis HOM05D002969 ORTHO05D003308 9.4e-97 359.0 315 62.2
Gohir.D06G200300 Gossypium hirsutum HOM05D002969 ORTHO05D003308 3.0e-95 354.0 809 34.0
MD11G1308600 Malus domestica HOM05D002969 ORTHO05D003308 1.3e-93 348.6 586 37.2
Phvul.011G011400 Phaseolus vulgaris HOM05D002969 ORTHO05D003308 9.4e-89 332.4 659 34.9
Glyma.12G000400 Glycine max HOM05D002969 ORTHO05D003308 1.2e-86 325.5 474 41.8
CiPaw.01G219400 Carya illinoinensis HOM05D002969 ORTHO05D003308 3.6e-80 303.9 259 57.1
Cpa.g.sc34.76 Carica papaya HOM05D002969 ORTHO05D003308 1.1e-73 282.3 260 58.5
vmacro15028 Vaccinium macrocarpon HOM05D002969 ORTHO05D003308 6.2e-72 276.6 179 77.7
PSO017G1278 Papaver somniferum HOM05D002969 ORTHO05D003308 5.2e-71 273.5 251 57.4
Zm00001eb254770 Zea mays HOM05D002969 ORTHO05D003308 2.3e-66 258.1 312 45.2
Peaxi162Scf00559g00315 Petunia axillaris HOM05D002969 ORTHO05D003308 2.5e-65 254.6 814 30.0
Zm00001eb247980 Zea mays HOM05D002969 ORTHO05D003308 8.3e-61 239.6 290 45.2
Zm00001eb254680 Zea mays HOM05D002969 ORTHO05D003308 6.0e-59 233.4 406 37.2
vmacro15025 Vaccinium macrocarpon HOM05D002969 ORTHO05D003308 7.6e-54 216.5 122 85.2
Zm00001eb247960 Zea mays HOM05D002969 ORTHO05D003308 5.4e-52 210.3 229 48.5
PSO478G1045 Papaver somniferum HOM05D002969 ORTHO05D003308 1.0e-50 206.1 195 55.4
GSVIVG01001689001 Vitis vinifera HOM05D002969 ORTHO05D003308 1.1e-49 202.6 170 60.6
Os05g0569900 Oryza sativa ssp. japonica HOM05D002969 ORTHO05D003308 2.4e-47 194.9 269 40.5
Lalb_Chr10g0094391 Lupinus albus HOM05D002969 ORTHO05D003308 1.1e-44 186.0 205 50.2
Aqoxy4G01956 Aquilegia oxysepala HOM05D002969 ORTHO05D003308 6.0e-43 180.3 315 41.0
FvH4_2g23920 Fragaria vesca HOM05D002969 ORTHO05D003308 4.8e-40 170.6 439 28.5
FAN24G1542 Fragaria x ananassa HOM05D002969 ORTHO05D003308 4.8e-40 170.6 439 28.5
FAN15G1247 Fragaria x ananassa HOM05D002969 ORTHO05D003308 9.9e-38 162.9 439 27.6
FAN27G1917 Fragaria x ananassa HOM05D002969 ORTHO05D003308 2.2e-37 161.8 435 27.6
unitig_26.g8927 Utricularia gibba HOM05D002969 ORTHO05D003308 6.7e-34 150.2 620 25.3
COL.COLO4_27975 Corchorus olitorius HOM05D002969 ORTHO05D003308 4.0e-31 141.0 166 50.0
CAN.G397.52 Capsicum annuum HOM05D002969 ORTHO05D003308 1.6e-27 129.0 123 50.4
Peaxi162Scf00006g00211 Petunia axillaris HOM05D002969 ORTHO05D003308 8.7e-26 123.2 116 52.6
SEGI_00337 Sequoiadendron giganteum HOM05D002969 ORTHO05D003308 2.1e-24 118.6 130 50.8
Cre12.g518107 Chlamydomonas reinhardtii HOM05D002969 ORTHO05D003308 2.8e-24 118.2 469 23.9
AT1G59460 Arabidopsis thaliana HOM05D002969 ORTHO05D003308 3.7e-24 117.9 113 55.8
SEGI_18157 Sequoiadendron giganteum HOM05D002969 ORTHO05D003308 4.5e-22 110.9 93 63.4
COL.COLO4_30699 Corchorus olitorius HOM05D002969 ORTHO05D003308 1.7e-21 109.0 126 45.2
Nitab4.5_0010825g0020 Nicotiana tabacum HOM05D002969 ORTHO05D003308 2.2e-21 108.6 139 43.2
Zm00001eb254790 Zea mays HOM05D002969 ORTHO05D003308 2.2e-21 108.6 122 50.0
SEGI_24169 Sequoiadendron giganteum HOM05D002969 ORTHO05D003308 2.7e-19 101.7 91 54.9
RcHm_v2.0_Chr6g0291541 Rosa chinensis HOM05D002969 ORTHO05D003308 3.3e-17 94.7 128 41.4
SEGI_18101 Sequoiadendron giganteum HOM05D002969 ORTHO05D003308 2.1e-16 92.0 82 51.2
Potri.001G170001 Populus trichocarpa HOM05D002969 ORTHO05D003308 1.3e-13 82.8 95 46.3
RcHm_v2.0_Chr6g0291551 Rosa chinensis HOM05D002969 ORTHO05D003308 3.8e-13 81.3 137 33.6
CARHR117350 Cardamine hirsuta HOM05D002969 ORTHO05D003308 2.1e-11 75.5 75 53.3
COL.COLO4_38602 Corchorus olitorius HOM05D002969 ORTHO05D003308 1.1e-09 69.7 99 40.4
CDE04G0067 Ceratophyllum demersum HOM05D007059 ORTHO05D009155 3.7e-08 64.7 74 40.5
Sabra01G0141400 Salix brachista HOM05D002969 ORTHO05D003308 6.3e-08 63.9 206 29.1
QL10p018850 Quercus lobata HOM05D002969 ORTHO05D003308 6.9e-07 60.5 81 42.0


User provided reference genes

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