Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047309 Camellia sinensis var. sinensis HOM05D014645 ORTHO05D009761 1.3e-209 733.0 437 100.0
CSS0045433 Camellia sinensis var. sinensis HOM05D014645 ORTHO05D009761 1.7e-84 317.4 497 45.7
Dinv03635 Davidia involucrata HOM05D009013 ORTHO05D009761 6.2e-66 255.8 448 44.6
Actinidia19483 Actinidia chinensis HOM05D014645 ORTHO05D009761 8.9e-65 251.9 398 45.5
Actinidia27190 Actinidia chinensis HOM05D014645 ORTHO05D009761 8.6e-60 235.3 482 39.2
Actinidia39545 Actinidia chinensis HOM05D014645 ORTHO05D009761 2.5e-59 233.8 482 39.0
Actinidia07666 Actinidia chinensis HOM05D014645 ORTHO05D009761 3.3e-59 233.4 411 43.1
Rhsim02G0193600 Rhododendron simsii HOM05D014645 ORTHO05D009761 4.9e-55 219.5 436 39.4
Dinv32301 Davidia involucrata HOM05D009013 ORTHO05D009761 7.1e-30 136.0 341 37.0
Ciclev10017480m.g Citrus clementina HOM05D009852 ORTHO05D009761 5.3e-25 119.8 442 34.4
QL05p060720 Quercus lobata HOM05D009013 ORTHO05D009761 7.6e-24 115.9 442 31.2
Hma1.2p1_0015F.1_g010420 Hydrangea macrophylla HOM05D009013 ORTHO05D009761 1.0e-23 115.5 411 33.1
Oeu046855.1 Olea europaea HOM05D012266 ORTHO05D011876 1.1e-22 112.1 446 32.3
Actinidia16749 Actinidia chinensis HOM05D014645 ORTHO05D009761 1.8e-20 104.8 197 40.1
Manes.15G116600 Manihot esculenta HOM05D009852 ORTHO05D009761 1.8e-20 104.8 476 30.9
CiPaw.10G096600 Carya illinoinensis HOM05D009013 ORTHO05D009761 1.5e-19 101.7 437 27.5
DCAR_007913 Daucus carota HOM05D009013 ORTHO05D009761 3.3e-19 100.5 177 42.4
Haze_05479 Corylus avellana HOM05D009013 ORTHO05D009761 5.7e-19 99.8 442 28.7
Lj4g0005206 Lotus japonicus HOM05D009013 ORTHO05D009761 9.7e-19 99.0 440 28.4
Potri.011G077700 Populus trichocarpa HOM05D009852 ORTHO05D009761 3.7e-18 97.1 443 27.8
TWI73G0525 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 1.4e-17 95.1 408 27.9
Oeu021526.1 Olea europaea HOM05D012266 ORTHO05D011876 1.5e-16 91.7 445 29.9
Cfa001036 Carpinus fangiana HOM05D009013 ORTHO05D009761 3.4e-16 90.5 416 26.4
Manes.17G064400 Manihot esculenta HOM05D009852 ORTHO05D009761 5.9e-16 89.7 450 32.0
TWI09G1113 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 2.9e-15 87.4 445 26.5
TWI09G0214 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 1.1e-14 85.5 445 26.3
Potri.001G354600 Populus trichocarpa HOM05D009852 ORTHO05D009761 7.2e-14 82.8 437 31.8
Thecc.06G158200 Theobroma cacao HOM05D009852 ORTHO05D009761 7.2e-14 82.8 440 30.9
Duzib235G1088 Durio zibethinus HOM05D009852 ORTHO05D009761 9.4e-14 82.4 442 30.3
Oeu001056.1 Olea europaea HOM05D012266 ORTHO05D011876 1.2e-13 82.0 448 28.8
Cc00_g03210 Coffea canephora HOM05D012094 ORTHO05D009761 1.6e-13 81.6 400 28.2
CiPaw.09G129900 Carya illinoinensis HOM05D009013 ORTHO05D009761 7.9e-13 79.3 108 41.7
Atru.chr10.1414 Acer truncatum HOM05D009852 ORTHO05D009761 1.4e-12 78.6 405 25.4
Duzib192G0106 Durio zibethinus HOM05D009852 ORTHO05D009761 3.0e-12 77.4 437 28.4
DCAR_003953 Daucus carota HOM05D009013 ORTHO05D009761 8.8e-12 75.9 109 41.3
Gorai.010G164100 Gossypium raimondii HOM05D009852 ORTHO05D009761 2.5e-11 74.3 437 28.6
Gohir.D06G140600 Gossypium hirsutum HOM05D009852 ORTHO05D009761 3.3e-11 73.9 437 28.6
Lj6g0000102 Lotus japonicus HOM05D009013 ORTHO05D009761 2.2e-10 71.2 216 29.2
Glyma.13G051300 Glycine max HOM05D009013 ORTHO05D009761 2.8e-10 70.9 55 58.2
CANSAT35G0309 Cannabis sativa HOM05D009013 ORTHO05D009761 3.7e-10 70.5 439 29.2
Glyma.09G085700 Glycine max HOM05D009013 ORTHO05D009761 3.7e-10 70.5 255 28.6
Phvul.009G214600 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 4.8e-10 70.1 440 25.9
Sabra16G0233200 Salix brachista HOM05D009852 ORTHO05D009761 4.8e-10 70.1 110 37.3
Duzib160G0535 Durio zibethinus HOM05D009852 ORTHO05D009761 1.1e-09 68.9 442 30.1
Prupe.4G073200 Prunus persica HOM05D014736 ORTHO05D009761 1.1e-09 68.9 407 24.1
Lalb_Chr12g0204801 Lupinus albus HOM05D009013 ORTHO05D009761 1.4e-09 68.6 152 34.2
TPR.G31355 Trifolium pratense HOM05D009013 ORTHO05D009761 1.4e-09 68.6 156 34.6
EL10Ac8g19799 Beta vulgaris HOM05D018558 ORTHO05D018254 1.8e-09 68.2 170 31.2
Sopen02g020380 Solanum pennellii HOM05D012094 ORTHO05D011876 2.4e-09 67.8 458 25.1
PGSC0003DMG400003088 Solanum tuberosum HOM05D012094 ORTHO05D011876 2.4e-09 67.8 453 23.8
FAN11G2258 Fragaria x ananassa HOM05D014736 ORTHO05D009761 3.1e-09 67.4 223 28.7
Eucgr.D00345 Eucalyptus grandis HOM05D014736 ORTHO05D009761 4.1e-09 67.0 82 40.2
TPR.G22001 Trifolium pratense HOM05D009013 ORTHO05D009761 4.1e-09 67.0 102 41.2
FvH4_3g06440 Fragaria vesca HOM05D014736 ORTHO05D009761 1.2e-08 65.5 181 32.6
Lalb_Chr07g0186121 Lupinus albus HOM05D009013 ORTHO05D009761 1.2e-08 65.5 221 29.0
MD10G1268000 Malus domestica HOM05D014736 ORTHO05D009761 1.2e-08 65.5 196 28.1
FAN25G1841 Fragaria x ananassa HOM05D014736 ORTHO05D009761 1.5e-08 65.1 223 28.7
Nitab4.5_0001283g0020 Nicotiana tabacum HOM05D012094 ORTHO05D011876 2.0e-08 64.7 450 25.1
Lalb_Chr08g0233301 Lupinus albus HOM05D009013 ORTHO05D009761 2.6e-08 64.3 45 57.8
Lalb_Chr23g0275971 Lupinus albus HOM05D009013 ORTHO05D009761 2.6e-08 64.3 101 40.6
MD05G1292200 Malus domestica HOM05D014736 ORTHO05D009761 2.6e-08 64.3 158 30.4
Psat1g020440 Pisum sativum HOM05D009013 ORTHO05D009761 3.4e-08 63.9 52 53.8
Glyma.08G121600 Glycine max HOM05D009013 ORTHO05D009761 4.5e-08 63.5 152 32.2
Gohir.A06G135400 Gossypium hirsutum HOM05D009852 ORTHO05D009761 4.5e-08 63.5 255 29.0
Glyma.15G195700 Glycine max HOM05D009013 ORTHO05D009761 5.9e-08 63.2 437 27.2
MSTRG.16199 Avicennia marina HOM05D012266 ORTHO05D011876 1.0e-07 62.4 440 25.2
Psat1g018200 Pisum sativum HOM05D009013 ORTHO05D009761 2.2e-07 61.2 105 38.1
Sabra11G0072300 Salix brachista HOM05D009852 ORTHO05D009761 2.2e-07 61.2 146 34.2
VMungo1309G2255 Vigna mungo HOM05D009013 ORTHO05D009761 2.2e-07 61.2 445 25.8
Peaxi162Scf00121g01412 Petunia axillaris HOM05D012094 ORTHO05D011876 2.9e-07 60.8 197 32.5
Glyma.05G164200 Glycine max HOM05D009013 ORTHO05D009761 3.8e-07 60.5 100 36.0
VMungo0251G0903 Vigna mungo HOM05D009013 ORTHO05D009761 6.5e-07 59.7 106 35.8
TAR624G0539 Trochodendron aralioides HOM05D041535 ORTHO05D009761 1.1e-06 58.9 291 30.2
Solyc02g071320.4 Solanum lycopersicum HOM05D012094 ORTHO05D011876 1.4e-06 58.5 144 33.3
FAN21G2246 Fragaria x ananassa HOM05D014736 ORTHO05D009761 1.9e-06 58.2 214 27.6
SalBow7G2103 Salvia bowleyana HOM05D012266 ORTHO05D011876 3.2e-06 57.4 441 25.6
Ah.14g086770 Amaranthus hybridus HOM05D018558 ORTHO05D018254 5.5e-06 56.6 141 34.0
COL.COLO4_22804 Corchorus olitorius HOM05D009852 ORTHO05D009761 5.5e-06 56.6 406 23.4
Gohir.D10G032500 Gossypium hirsutum HOM05D009852 ORTHO05D009761 9.4e-06 55.8 88 39.8
Gorai.011G034400 Gossypium raimondii HOM05D009852 ORTHO05D009761 9.4e-06 55.8 88 39.8


User provided reference genes

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