Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047308 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 4.7e-52 207.6 107 100.0
RhsimUnG0109600 Rhododendron simsii HOM05D007926 ORTHO05D009983 2.8e-28 128.6 103 57.3
Rhsim13G0146200 Rhododendron simsii HOM05D007926 ORTHO05D009983 4.8e-28 127.9 103 57.3
Hma1.2p1_0700F.1_g205740 Hydrangea macrophylla HOM05D007926 ORTHO05D009983 1.8e-27 125.9 93 63.4
CSS0027622 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 4.0e-27 124.8 103 52.4
CSS0041628 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 4.0e-27 124.8 94 56.4
Prupe.4G010900 Prunus persica HOM05D007926 ORTHO05D009983 8.4e-25 117.1 102 52.0
Migut.H01604 Erythranthe guttata HOM05D007926 ORTHO05D009983 1.1e-24 116.7 81 61.7
SGA_v2.0_scaffold89G27497 Striga asiatica HOM05D007926 ORTHO05D009983 9.3e-24 113.6 75 64.0
Oeu002767.1 Olea europaea HOM05D007926 ORTHO05D009983 2.1e-23 112.5 99 52.5
TAR627G0241 Trochodendron aralioides HOM05D007926 ORTHO05D009983 2.7e-23 112.1 104 51.9
DCAR_002220 Daucus carota HOM05D007926 ORTHO05D009983 2.3e-22 109.0 104 51.0
FAN21G0219 Fragaria x ananassa HOM05D007926 ORTHO05D009983 2.3e-22 109.0 107 49.5
Ciclev10017269m.g Citrus clementina HOM05D007926 ORTHO05D009983 3.9e-22 108.2 103 53.4
TWI63G0020 Tripterygium wilfordii HOM05D007926 ORTHO05D009983 5.1e-22 107.8 91 54.9
Manes.13G107300 Manihot esculenta HOM05D007926 ORTHO05D009983 8.7e-22 107.1 105 49.5
Solyc04g014750.1 Solanum lycopersicum HOM05D007926 ORTHO05D009983 8.7e-22 107.1 108 49.1
Sopen04g006860 Solanum pennellii HOM05D007926 ORTHO05D009983 8.7e-22 107.1 108 49.1
CiPaw.09G102200 Carya illinoinensis HOM05D007926 ORTHO05D009983 1.1e-21 106.7 88 48.9
FvH4_3g01020 Fragaria vesca HOM05D007926 ORTHO05D009983 1.1e-21 106.7 107 48.6
Cfa000107 Carpinus fangiana HOM05D007926 ORTHO05D009983 1.5e-21 106.3 100 51.0
Duzib192G0081 Durio zibethinus HOM05D007926 ORTHO05D009983 1.5e-21 106.3 83 53.0
FAN25G3056 Fragaria x ananassa HOM05D007926 ORTHO05D009983 1.5e-21 106.3 107 48.6
CANSAT56G0946 Cannabis sativa HOM05D007926 ORTHO05D009983 2.5e-21 105.5 94 48.9
Eucgr.E03949 Eucalyptus grandis HOM05D007926 ORTHO05D009983 2.5e-21 105.5 104 48.1
PGR042G0446 Punica granatum HOM05D007926 ORTHO05D009983 2.5e-21 105.5 104 46.2
Sabra06G0007300 Salix brachista HOM05D007926 ORTHO05D009983 4.3e-21 104.8 120 46.7
PGSC0003DMG400023652 Solanum tuberosum HOM05D007926 ORTHO05D009983 5.6e-21 104.4 106 46.2
Potri.006G009500 Populus trichocarpa HOM05D007926 ORTHO05D009983 9.6e-21 103.6 71 62.0
Glyma.15G114500 Glycine max HOM05D007926 ORTHO05D009983 2.1e-20 102.4 105 44.8
Gohir.D06G216000 Gossypium hirsutum HOM05D007926 ORTHO05D009983 8.1e-20 100.5 98 55.1
Gorai.010G250100 Gossypium raimondii HOM05D007926 ORTHO05D009983 8.1e-20 100.5 98 55.1
Manes.09G070200 Manihot esculenta HOM05D007926 ORTHO05D009983 8.1e-20 100.5 78 57.7
Gohir.A06G205500 Gossypium hirsutum HOM05D007926 ORTHO05D009983 1.1e-19 100.1 111 53.2
arahy.Tifrunner.gnm1.ann1.I7SJA3 Arachis hypogaea HOM05D007926 ORTHO05D009983 1.4e-19 99.8 105 45.7
Atru.chr1.2458 Acer truncatum HOM05D007926 ORTHO05D009983 1.8e-19 99.4 103 46.6
AUR62021866 Chenopodium quinoa HOM05D007926 ORTHO05D009983 4.0e-19 98.2 89 49.4
Lalb_Chr18g0056941 Lupinus albus HOM05D007926 ORTHO05D009983 4.0e-19 98.2 90 48.9
Sc05g0009590 Simmondsia chinensis HOM05D007926 ORTHO05D009983 4.0e-19 98.2 103 49.5
DCAR_004887 Daucus carota HOM05D000701 ORTHO05D000531 6.9e-19 97.4 64 67.2
Phvul.006G143300 Phaseolus vulgaris HOM05D007926 ORTHO05D009983 2.0e-18 95.9 95 45.3
Gohir.A10G009400 Gossypium hirsutum HOM05D007926 ORTHO05D009983 3.4e-18 95.1 104 40.4
Gorai.011G009900 Gossypium raimondii HOM05D007926 ORTHO05D009983 1.7e-17 92.8 104 40.4
RcHm_v2.0_Chr5g0001551 Rosa chinensis HOM05D007926 ORTHO05D009983 2.2e-17 92.4 106 48.1
Eucgr.E03934 Eucalyptus grandis HOM05D007926 ORTHO05D009983 2.4e-16 89.0 75 52.0
Nn1g03317 Nelumbo nucifera HOM05D007926 ORTHO05D009983 9.3e-16 87.0 106 47.2
Gohir.D10G009100 Gossypium hirsutum HOM05D007926 ORTHO05D009983 1.6e-15 86.3 88 43.2
MD10G1331300 Malus domestica HOM05D007926 ORTHO05D009983 1.6e-15 86.3 101 45.5
HanXRQChr15g0470111 Helianthus annuus HOM05D007926 ORTHO05D009983 3.5e-15 85.1 78 52.6
Sed0015463 Sechium edule HOM05D007926 ORTHO05D009983 3.0e-14 82.0 96 40.6
MELO3C021682.2 Cucumis melo HOM05D007926 ORTHO05D009983 1.5e-13 79.7 75 48.0
Sp1g10740 Schrenkiella parvula HOM05D007926 ORTHO05D009983 8.2e-12 73.9 111 36.0
Thhalv10009916m.g Eutrema salsugineum HOM05D007926 ORTHO05D009983 1.1e-11 73.6 109 35.8
AT1G12064 Arabidopsis thaliana HOM05D007926 ORTHO05D009983 1.4e-11 73.2 108 38.9
THA.LOC104809471 Tarenaya hassleriana HOM05D007926 ORTHO05D009983 1.4e-11 73.2 67 46.3
CARHR012430 Cardamine hirsuta HOM05D007926 ORTHO05D009983 4.0e-11 71.6 108 31.5
Carub.0001s1175 Capsella rubella HOM05D007926 ORTHO05D009983 5.3e-11 71.2 110 32.7
ATR0712G022 Amborella trichopoda HOM05D007926 ORTHO05D009983 6.9e-11 70.9 84 39.3
BcaC07g41751 Brassica carinata HOM05D007926 ORTHO05D009983 6.9e-11 70.9 71 40.8
TPR.G13087 Trifolium pratense HOM05D007926 ORTHO05D009983 6.9e-11 70.9 104 32.7
Aa31LG1G2660 Aethionema arabicum HOM05D007926 ORTHO05D009983 9.0e-11 70.5 105 33.3
Lj6g0017055 Lotus japonicus HOM05D007926 ORTHO05D009983 1.2e-10 70.1 88 42.0
AL1G23320 Arabidopsis lyrata HOM05D007926 ORTHO05D009983 2.0e-10 69.3 96 35.4
BcaC05g25224 Brassica carinata HOM05D007926 ORTHO05D009983 2.6e-10 68.9 111 33.3
C05p11100 Brassica napus HOM05D007926 ORTHO05D009983 2.6e-10 68.9 111 33.3
BolC5t29857H Brassica oleracea HOM05D007926 ORTHO05D009983 2.6e-10 68.9 111 33.3
BcaB02g06430 Brassica carinata HOM05D007926 ORTHO05D009983 3.4e-10 68.6 111 33.3
C08p47740 Brassica napus HOM05D007926 ORTHO05D009983 3.4e-10 68.6 62 43.5
BraA08t35224Z Brassica rapa HOM05D007926 ORTHO05D009983 5.8e-10 67.8 112 33.9
A06p09430 Brassica napus HOM05D007926 ORTHO05D009983 7.6e-10 67.4 111 32.4
BolC8t52311H Brassica oleracea HOM05D007926 ORTHO05D009983 7.6e-10 67.4 62 43.5
BraA06t24128Z Brassica rapa HOM05D007926 ORTHO05D009983 7.6e-10 67.4 111 32.4
BcaB08g37432 Brassica carinata HOM05D007926 ORTHO05D009983 2.2e-09 65.9 111 32.4
BcaC07g41734 Brassica carinata HOM05D007926 ORTHO05D009983 2.2e-09 65.9 111 32.4
BcaC07g41735 Brassica carinata HOM05D007926 ORTHO05D009983 2.2e-09 65.9 111 32.4
A09p64120 Brassica napus HOM05D007926 ORTHO05D009983 3.8e-09 65.1 62 41.9
BraA09t41758Z Brassica rapa HOM05D007926 ORTHO05D009983 3.8e-09 65.1 62 41.9
A08p33040 Brassica napus HOM05D007926 ORTHO05D009983 1.1e-08 63.5 112 33.0
ClCG01G010240 Citrullus lanatus HOM05D007926 ORTHO05D009983 9.3e-08 60.5 96 35.4
Medtr2g025700 Medicago truncatula HOM05D007926 ORTHO05D009983 9.3e-08 60.5 82 34.1


User provided reference genes

Program Settings