Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047301 Camellia sinensis var. sinensis HOM05D005795 ORTHO05D007200 1.4e-163 579.7 331 100.0
Rhsim02G0076300 Rhododendron simsii HOM05D005795 ORTHO05D007200 2.8e-135 485.7 333 79.0
Actinidia35971 Actinidia chinensis HOM05D005795 ORTHO05D007200 3.4e-133 478.8 332 81.9
Dinv44196 Davidia involucrata HOM05D005795 ORTHO05D007200 3.8e-132 475.3 331 82.2
Actinidia11305 Actinidia chinensis HOM05D005795 ORTHO05D007200 1.9e-131 473.0 325 84.3
Manes.04G041300 Manihot esculenta HOM05D005795 ORTHO05D007200 1.4e-115 420.2 333 73.9
Duzib212G0505 Durio zibethinus HOM05D005795 ORTHO05D007200 3.5e-114 415.6 330 73.3
Thecc.04G314000 Theobroma cacao HOM05D005795 ORTHO05D007200 6.0e-114 414.8 330 72.7
CiPaw.01G101200 Carya illinoinensis HOM05D005795 ORTHO05D007200 1.3e-113 413.7 329 74.2
vmacro15646 Vaccinium macrocarpon HOM05D005795 ORTHO05D007200 1.5e-112 410.2 349 61.6
TWI38G2022 Tripterygium wilfordii HOM05D005795 ORTHO05D007200 1.9e-112 409.8 327 73.4
Cfa015145 Carpinus fangiana HOM05D005795 ORTHO05D007200 7.4e-112 407.9 329 75.1
Haze_01529 Corylus avellana HOM05D005795 ORTHO05D007200 7.4e-112 407.9 329 72.9
Ciclev10021008m.g Citrus clementina HOM05D005795 ORTHO05D007200 1.6e-111 406.8 333 71.5
Peaxi162Scf00375g00059 Petunia axillaris HOM05D005795 ORTHO05D007200 8.1e-111 404.4 321 72.9
Gohir.D05G287100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 5.3e-110 401.7 332 71.7
arahy.Tifrunner.gnm1.ann1.LQCR4Y Arachis hypogaea HOM05D005795 ORTHO05D007200 2.0e-109 399.8 324 70.1
ClCG07G015610 Citrullus lanatus HOM05D005795 ORTHO05D007200 2.0e-109 399.8 327 72.8
Lj6A56T30 Lonicera japonica HOM05D005795 ORTHO05D007200 2.0e-109 399.8 329 73.9
Lsat_1_v5_gn_6_55280 Lactuca sativa HOM05D005795 ORTHO05D007200 2.6e-109 399.4 350 64.6
Lalb_Chr22g0352181 Lupinus albus HOM05D005795 ORTHO05D007200 2.6e-109 399.4 331 71.3
Gorai.009G302100 Gossypium raimondii HOM05D005795 ORTHO05D007200 3.4e-109 399.1 332 71.4
Sabra07G0103500 Salix brachista HOM05D005795 ORTHO05D007200 5.8e-109 398.3 324 69.1
Gohir.A05G286100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 7.6e-109 397.9 332 71.1
COL.COLO4_21665 Corchorus olitorius HOM05D005795 ORTHO05D007200 1.3e-108 397.1 330 72.1
Nn1g09576 Nelumbo nucifera HOM05D005795 ORTHO05D007200 1.3e-108 397.1 331 71.0
THA.LOC104803670 Tarenaya hassleriana HOM05D005795 ORTHO05D007200 6.5e-108 394.8 327 70.6
MELO3C017720.2 Cucumis melo HOM05D005795 ORTHO05D007200 1.4e-107 393.7 321 72.0
PSO732G0188 Papaver somniferum HOM05D005795 ORTHO05D007200 1.4e-107 393.7 332 71.1
Lsat_1_v5_gn_9_14160 Lactuca sativa HOM05D005795 ORTHO05D007200 5.5e-107 391.7 350 63.4
PSO675G7496 Papaver somniferum HOM05D005795 ORTHO05D007200 9.3e-107 391.0 332 71.4
CsaV3_4G003310 Cucumis sativus L. HOM05D005795 ORTHO05D007200 3.5e-106 389.0 321 72.0
RcHm_v2.0_Chr4g0407031 Rosa chinensis HOM05D005795 ORTHO05D007200 4.6e-106 388.7 321 72.9
SalBow3G4461 Salvia bowleyana HOM05D005795 ORTHO05D007200 1.3e-105 387.1 325 69.8
CANSAT78G1297 Cannabis sativa HOM05D005795 ORTHO05D007200 1.8e-105 386.7 326 66.0
Cc08_g05980 Coffea canephora HOM05D005795 ORTHO05D007200 1.8e-105 386.7 325 69.8
HanXRQChr07g0186111 Helianthus annuus HOM05D005795 ORTHO05D007200 6.7e-105 384.8 329 65.3
Medtr2g098650 Medicago truncatula HOM05D005795 ORTHO05D007200 1.5e-104 383.6 327 67.9
Ca_01264_v3 Cicer arietinum L. HOM05D005795 ORTHO05D007200 2.5e-104 382.9 326 69.3
Sed0015939 Sechium edule HOM05D005795 ORTHO05D007200 8.2e-103 377.9 317 69.7
Glyma.15G030700 Glycine max HOM05D005795 ORTHO05D007200 1.8e-102 376.7 340 65.3
DCAR_003909 Daucus carota HOM05D005795 ORTHO05D007200 2.4e-102 376.3 327 67.0
Cc05_g13970 Coffea canephora HOM05D005795 ORTHO05D007200 4.1e-102 375.6 325 68.3
FAN07G0438 Fragaria x ananassa HOM05D005795 ORTHO05D007200 4.1e-102 375.6 321 69.5
Hund03150 Selenicereus undatus HOM05D005795 ORTHO05D007200 4.1e-102 375.6 332 66.3
HPP92_013540 Vanilla planifolia HOM05D005795 ORTHO05D007200 9.0e-102 374.4 324 63.0
FvH4_4g10680 Fragaria vesca HOM05D005795 ORTHO05D007200 3.4e-101 372.5 321 69.5
MSTRG.9769 Avicennia marina HOM05D005795 ORTHO05D007200 1.3e-100 370.5 327 67.6
Lj3g0002937 Lotus japonicus HOM05D005795 ORTHO05D007200 1.3e-100 370.5 323 68.7
Glyma.13G343600 Glycine max HOM05D005795 ORTHO05D007200 2.9e-100 369.4 358 60.1
QL10p048508 Quercus lobata HOM05D005795 ORTHO05D007200 6.5e-100 368.2 329 68.1
ECA233G5655 Erigeron canadensis HOM05D005795 ORTHO05D007200 1.1e-99 367.5 328 64.9
VMungo1080G0355 Vigna mungo HOM05D005795 ORTHO05D007200 1.1e-99 367.5 335 64.2
AL5G41280 Arabidopsis lyrata HOM05D005795 ORTHO05D007200 2.5e-99 366.3 326 67.2
GSVIVG01010747001 Vitis vinifera HOM05D005795 ORTHO05D007200 2.5e-99 366.3 332 68.4
Cpa.g.sc41.30 Carica papaya HOM05D005795 ORTHO05D007200 5.5e-99 365.2 323 69.3
EL10Ac3g05921 Beta vulgaris HOM05D005795 ORTHO05D007200 9.3e-99 364.4 328 67.1
AT3G59380 Arabidopsis thaliana HOM05D005795 ORTHO05D007200 1.6e-98 363.6 326 66.9
SGA_v2.0_scaffold136G34981 Striga asiatica HOM05D005795 ORTHO05D007200 1.6e-98 363.6 329 65.7
Thhalv10025709m.g Eutrema salsugineum HOM05D005795 ORTHO05D007200 3.5e-98 362.5 323 67.8
Aa31LG10G13730 Aethionema arabicum HOM05D005795 ORTHO05D007200 4.6e-98 362.1 328 67.4
CARHR169760 Cardamine hirsuta HOM05D005795 ORTHO05D007200 1.3e-97 360.5 317 67.5
PGR083G1909 Punica granatum HOM05D005795 ORTHO05D007200 1.3e-97 360.5 327 67.6
SGA_v2.0_scaffold375G50253 Striga asiatica HOM05D005795 ORTHO05D007200 1.1e-96 357.5 329 65.0
ATR0743G276 Amborella trichopoda HOM05D005795 ORTHO05D007200 7.4e-96 354.8 329 67.5
Sopen06g029770 Solanum pennellii HOM05D005795 ORTHO05D007200 7.4e-96 354.8 329 66.3
Carub.0005s2612 Capsella rubella HOM05D005795 ORTHO05D007200 2.8e-95 352.8 332 64.8
PGSC0003DMG400027009 Solanum tuberosum HOM05D005795 ORTHO05D007200 3.7e-95 352.4 321 65.4
C01p27420 Brassica napus HOM05D005795 ORTHO05D007200 4.8e-95 352.1 319 67.4
AUR62002291 Chenopodium quinoa HOM05D005795 ORTHO05D007200 4.8e-95 352.1 328 66.5
Solyc06g073390.3 Solanum lycopersicum HOM05D005795 ORTHO05D007200 1.1e-94 350.9 329 66.0
Aqoxy2G04090 Aquilegia oxysepala HOM05D005795 ORTHO05D007200 3.1e-94 349.4 323 65.3
Prupe.1G191500 Prunus persica HOM05D005795 ORTHO05D007200 5.3e-94 348.6 326 65.6
TPR.G18871 Trifolium pratense HOM05D005795 ORTHO05D007200 9.0e-94 347.8 327 63.9
Atru.chr3.1532 Acer truncatum HOM05D005795 ORTHO05D007200 1.2e-93 347.4 327 64.5
Atru.chr3.1535 Acer truncatum HOM05D005795 ORTHO05D007200 1.2e-93 347.4 327 64.5
AUR62015400 Chenopodium quinoa HOM05D005795 ORTHO05D007200 3.4e-93 345.9 327 63.6
Eucgr.A00077 Eucalyptus grandis HOM05D005795 ORTHO05D007200 1.7e-92 343.6 317 68.1
Potri.007G127500 Populus trichocarpa HOM05D005795 ORTHO05D007200 7.9e-90 334.7 325 61.5
Migut.G00958 Erythranthe guttata HOM05D005795 ORTHO05D007200 1.0e-89 334.3 323 64.7
MD04G1007300 Malus domestica HOM05D005795 ORTHO05D007200 3.9e-89 332.4 326 64.1
Os09g0514400 Oryza sativa ssp. japonica HOM05D005795 ORTHO05D007200 3.9e-89 332.4 326 62.9
Phvul.005G152400 Phaseolus vulgaris HOM05D005795 ORTHO05D007200 8.2e-87 324.7 338 59.5
unitig_22.g5744 Utricularia gibba HOM05D005795 ORTHO05D007200 8.2e-87 324.7 335 59.7
Sp7g13790 Schrenkiella parvula HOM05D005795 ORTHO05D007200 3.1e-86 322.8 314 61.8
CAN.G65.180 Capsicum annuum HOM05D005795 ORTHO05D007200 5.9e-85 318.5 284 68.7
BcaC09g50250 Brassica carinata HOM05D005795 ORTHO05D007200 1.7e-84 317.0 297 67.0
Zm00001eb102710 Zea mays HOM05D005795 ORTHO05D007200 1.7e-84 317.0 311 61.7
Ah.13g072920 Amaranthus hybridus HOM05D005795 ORTHO05D007200 3.8e-84 315.8 328 54.3
CDE08G0443 Ceratophyllum demersum HOM05D005795 ORTHO05D007200 4.2e-83 312.4 322 59.9
A01p22030 Brassica napus HOM05D005795 ORTHO05D007200 5.1e-81 305.4 319 61.8
BraA01t02109Z Brassica rapa HOM05D005795 ORTHO05D007200 5.1e-81 305.4 319 61.8
BcaNung00265 Brassica carinata HOM05D005795 ORTHO05D007200 6.7e-81 305.1 319 61.4
Hma1.2p1_0754F.1_g213060 Hydrangea macrophylla HOM05D005795 ORTHO05D007200 4.8e-79 298.9 171 80.1
Nitab4.5_0003132g0100 Nicotiana tabacum HOM05D005795 ORTHO05D007200 2.6e-77 293.1 337 46.0
Pp3c9_24240 Physcomitrium patens HOM05D005795 ORTHO05D007200 3.7e-71 272.7 310 57.4
TAR633G0878 Trochodendron aralioides HOM05D005795 ORTHO05D007200 8.2e-71 271.6 172 73.3
BcaC06g33415 Brassica carinata HOM05D005795 ORTHO05D007200 1.3e-63 247.7 322 47.5
SMO137G0277 Selaginella moellendorffii HOM05D005795 ORTHO05D007200 1.3e-63 247.7 322 51.9
Nitab4.5_0005570g0030 Nicotiana tabacum HOM05D005795 ORTHO05D007200 2.2e-63 246.9 169 66.9
SHI30236 Sapria himalayana HOM05D005795 ORTHO05D007200 1.1e-62 244.6 253 50.6
Psat1g007200 Pisum sativum HOM05D005795 ORTHO05D007200 1.4e-62 244.2 170 65.3
Cc05_g03950 Coffea canephora HOM05D005795 ORTHO05D007200 3.5e-61 239.6 169 65.7
FAN12G2789 Fragaria x ananassa HOM05D005795 ORTHO05D007200 4.5e-61 239.2 161 67.1
Mapoly0093s0047 Marchantia polymorpha HOM05D005795 ORTHO05D007200 1.3e-60 237.7 323 51.4
Eucgr.A00272 Eucalyptus grandis HOM05D005795 ORTHO05D007200 5.0e-60 235.7 172 66.3
FAN12G0695 Fragaria x ananassa HOM05D005795 ORTHO05D007200 8.5e-60 235.0 160 66.9
Eucgr.A00076 Eucalyptus grandis HOM05D005795 ORTHO05D007200 3.0e-57 226.5 172 64.0
Oeu035829.1 Olea europaea HOM05D005795 ORTHO05D007200 4.0e-57 226.1 194 56.7
Sc03g0006720 Simmondsia chinensis HOM05D005795 ORTHO05D007200 1.2e-50 204.5 172 58.1
BolC1t02678H Brassica oleracea HOM05D005795 ORTHO05D000108 5.4e-46 189.1 163 57.1
FAN17G0508 Fragaria x ananassa HOM05D005795 ORTHO05D007200 1.2e-42 177.9 186 50.5
BcaC06g32941 Brassica carinata HOM05D005795 ORTHO05D007200 1.9e-38 164.1 163 49.7
AagrBONN_evm.TU.Sc2ySwM_228.2319 Anthoceros agrestis HOM05D005795 ORTHO05D007200 1.3e-36 157.9 210 57.1
CBR_g21757 Chara braunii HOM05D005795 ORTHO05D007200 5.6e-35 152.5 332 38.0
Duzib151G0649 Durio zibethinus HOM05D005795 ORTHO05D007200 1.1e-33 148.3 110 66.4
MCO13G170 Micromonas commoda HOM05D005795 ORTHO05D007200 1.4e-33 147.9 252 34.9
Eucgr.L02278 Eucalyptus grandis HOM05D005795 ORTHO05D007200 1.5e-27 127.9 101 61.4
Haze_01530 Corylus avellana HOM05D005795 ORTHO05D007200 2.5e-27 127.1 80 76.2
AagrBONN_evm.TU.Sc2ySwM_117.2773 Anthoceros agrestis HOM05D005795 ORTHO05D007200 1.6e-26 124.4 166 40.4
TAR633G0840 Trochodendron aralioides HOM05D005795 ORTHO05D007200 2.1e-26 124.0 81 74.1
Cre01.g016950 Chlamydomonas reinhardtii HOM05D005795 ORTHO05D007200 8.9e-25 118.6 253 46.6
SHI30240 Sapria himalayana HOM05D005795 ORTHO05D007200 1.5e-24 117.9 70 77.1
Cfa027123 Carpinus fangiana HOM05D004239 ORTHO05D005191 9.9e-24 115.2 367 29.4
Cpa.g.sc41.23 Carica papaya HOM05D005795 ORTHO05D007200 3.9e-20 103.2 88 55.7
A05p02150 Brassica napus HOM05D005795 ORTHO05D007200 5.6e-19 99.4 65 69.2
PSO648G0124 Papaver somniferum HOM05D005795 ORTHO05D007200 2.7e-13 80.5 48 77.1
Cpa.g.sc41.24 Carica papaya HOM05D005795 ORTHO05D007200 6.0e-13 79.3 128 39.1
Gohir.A10G135766 Gossypium hirsutum HOM05D005795 ORTHO05D007200 2.1e-10 70.9 58 56.9
SGA_v2.0_scaffold28G11802 Striga asiatica HOM05D005795 ORTHO05D007200 4.0e-09 66.6 183 27.9
SGA_v2.0_scaffold44G16637 Striga asiatica HOM05D005795 ORTHO05D007200 6.9e-09 65.9 153 32.7
Rhsim12G0155600 Rhododendron simsii HOM05D005795 ORTHO05D007200 2.6e-08 63.9 44 70.5
PSO063G4587 Papaver somniferum HOM05D005795 ORTHO05D007200 3.4e-08 63.5 58 55.2
Rhsim05G0171500 Rhododendron simsii HOM05D005795 ORTHO05D007200 7.6e-08 62.4 45 64.4


User provided reference genes

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