Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047230 Camellia sinensis var. sinensis HOM05D000194 ORTHO05D000069 3.5e-58 228.0 110 100.0
CSS0045811 Camellia sinensis var. sinensis HOM05D000194 ORTHO05D000069 6.1e-55 217.2 110 96.4
CSS0030015 Camellia sinensis var. sinensis HOM05D000194 ORTHO05D000069 8.3e-44 180.3 110 80.0
CSS0008614 Camellia sinensis var. sinensis HOM05D000194 ORTHO05D000069 1.1e-43 179.9 110 80.0
Actinidia13413 Actinidia chinensis HOM05D000194 ORTHO05D000069 3.3e-40 168.3 99 81.8
Dinv15571 Davidia involucrata HOM05D000194 ORTHO05D000069 4.4e-37 157.9 111 72.1
GSVIVG01010126001 Vitis vinifera HOM05D000194 ORTHO05D000069 1.9e-35 152.5 111 67.6
Dinv33998 Davidia involucrata HOM05D000194 ORTHO05D000069 3.5e-34 148.3 105 73.3
Nn3g17578 Nelumbo nucifera HOM05D000194 ORTHO05D000069 6.6e-33 144.1 110 63.6
Ciclev10031122m.g Citrus clementina HOM05D000194 ORTHO05D000069 3.3e-32 141.7 110 63.6
Hma1.2p1_0235F.1_g098580 Hydrangea macrophylla HOM05D000194 ORTHO05D000069 2.8e-31 138.7 111 67.6
Hma1.2p1_1348F.1_g277290 Hydrangea macrophylla HOM05D000194 ORTHO05D000069 1.1e-30 136.7 122 61.5
Thecc.02G320000 Theobroma cacao HOM05D000194 ORTHO05D000069 1.1e-30 136.7 110 59.1
Duzib268G0957 Durio zibethinus HOM05D000194 ORTHO05D000069 2.3e-30 135.6 110 56.4
Rhsim09G0119700 Rhododendron simsii HOM05D000194 ORTHO05D000069 6.8e-30 134.0 102 71.6
MD13G1054700 Malus domestica HOM05D000194 ORTHO05D000069 1.2e-29 133.3 110 59.1
CiPaw.05G120100 Carya illinoinensis HOM05D000194 ORTHO05D000069 2.6e-29 132.1 110 59.1
vmacro10460 Vaccinium macrocarpon HOM05D000194 ORTHO05D000069 1.3e-28 129.8 103 68.0
Duzib248G0629 Durio zibethinus HOM05D000194 ORTHO05D000069 1.7e-28 129.4 108 55.6
Glyma.01G068600 Glycine max HOM05D000194 ORTHO05D000069 6.4e-28 127.5 110 57.3
Atru.chr11.1524 Acer truncatum HOM05D000194 ORTHO05D000069 1.1e-27 126.7 108 61.1
Prupe.1G297200 Prunus persica HOM05D000194 ORTHO05D000069 1.4e-27 126.3 110 56.4
MD16G1053600 Malus domestica HOM05D000194 ORTHO05D000069 1.9e-27 125.9 112 56.2
CANSAT64G0687 Cannabis sativa HOM05D000194 ORTHO05D000069 3.2e-27 125.2 110 56.4
Gohir.A13G089200 Gossypium hirsutum HOM05D000194 ORTHO05D000069 4.1e-27 124.8 110 55.5
FAN12G0589 Fragaria x ananassa HOM05D000194 ORTHO05D000069 5.4e-27 124.4 110 54.5
Lalb_Chr10g0099301 Lupinus albus HOM05D000194 ORTHO05D000069 5.4e-27 124.4 110 54.5
Nitab4.5_0001196g0030 Nicotiana tabacum HOM05D000194 ORTHO05D000069 5.4e-27 124.4 110 57.3
TWI75G1851 Tripterygium wilfordii HOM05D000194 ORTHO05D000069 5.4e-27 124.4 111 58.6
DCAR_023730 Daucus carota HOM05D000194 ORTHO05D000069 7.1e-27 124.0 111 56.8
Gohir.D13G086600 Gossypium hirsutum HOM05D000194 ORTHO05D000069 7.1e-27 124.0 110 55.5
Gorai.013G098600 Gossypium raimondii HOM05D000194 ORTHO05D000069 7.1e-27 124.0 110 55.5
FvH4_4g28910 Fragaria vesca HOM05D000194 ORTHO05D000069 9.2e-27 123.6 110 54.5
Medtr5g048860 Medicago truncatula HOM05D000194 ORTHO05D000069 9.2e-27 123.6 110 54.5
Potri.010G136100 Populus trichocarpa HOM05D000194 ORTHO05D000069 9.2e-27 123.6 110 55.5
CiPaw.06G095900 Carya illinoinensis HOM05D000194 ORTHO05D000069 1.2e-26 123.2 109 56.0
Cpa.g.sc1.175 Carica papaya HOM05D000194 ORTHO05D000069 1.6e-26 122.9 114 56.1
QL03p073031 Quercus lobata HOM05D000194 ORTHO05D000069 1.6e-26 122.9 109 56.9
Manes.14G092200 Manihot esculenta HOM05D000194 ORTHO05D000069 2.7e-26 122.1 110 55.5
RcHm_v2.0_Chr4g0437041 Rosa chinensis HOM05D000194 ORTHO05D000069 2.7e-26 122.1 110 52.7
Glyma.02G125200 Glycine max HOM05D000194 ORTHO05D000069 6.0e-26 120.9 110 54.5
Cc11_g11360 Coffea canephora HOM05D000194 ORTHO05D000069 7.8e-26 120.6 111 56.8
FAN22G1740 Fragaria x ananassa HOM05D000194 ORTHO05D000069 7.8e-26 120.6 110 53.6
Lj2g0026439 Lotus japonicus HOM05D000194 ORTHO05D000069 1.0e-25 120.2 109 55.0
Manes.06G078400 Manihot esculenta HOM05D000194 ORTHO05D000069 1.3e-25 119.8 110 55.5
MSTRG.787 Avicennia marina HOM05D000194 ORTHO05D000069 1.7e-25 119.4 105 61.9
TAR374G0528 Trochodendron aralioides HOM05D000194 ORTHO05D000069 1.7e-25 119.4 109 56.9
CAN.G182.6 Capsicum annuum HOM05D000194 ORTHO05D000069 3.0e-25 118.6 112 54.5
Sabra10G0104600 Salix brachista HOM05D000194 ORTHO05D000069 3.0e-25 118.6 111 55.0
PGSC0003DMG400019659 Solanum tuberosum HOM05D000194 ORTHO05D000069 3.9e-25 118.2 112 55.4
Lalb_Chr17g0341611 Lupinus albus HOM05D000194 ORTHO05D000069 5.1e-25 117.9 115 53.9
Solyc05g010610.3 Solanum lycopersicum HOM05D000194 ORTHO05D000069 5.1e-25 117.9 112 55.4
Ca_30981_v3 Cicer arietinum L. HOM05D000194 ORTHO05D000069 6.6e-25 117.5 110 50.9
Sopen05g006420 Solanum pennellii HOM05D000194 ORTHO05D000069 8.6e-25 117.1 112 54.5
PSO017G0342 Papaver somniferum HOM05D000194 ORTHO05D000069 1.5e-24 116.3 112 56.2
Phvul.002G110500 Phaseolus vulgaris HOM05D000194 ORTHO05D000069 1.5e-24 116.3 110 50.9
Peaxi162Scf00026g00312 Petunia axillaris HOM05D000194 ORTHO05D000069 1.9e-24 115.9 109 56.0
Peaxi162Scf00188g00813 Petunia axillaris HOM05D000194 ORTHO05D000069 1.9e-24 115.9 103 55.3
Nitab4.5_0003339g0020 Nicotiana tabacum HOM05D000194 ORTHO05D000069 2.5e-24 115.5 110 56.4
TAR622G0611 Trochodendron aralioides HOM05D000194 ORTHO05D000069 2.5e-24 115.5 99 59.6
PSO478G3772 Papaver somniferum HOM05D000194 ORTHO05D000069 3.3e-24 115.2 112 56.2
TWI79G0336 Tripterygium wilfordii HOM05D000194 ORTHO05D000069 4.3e-24 114.8 111 54.1
VMungo1215G3218 Vigna mungo HOM05D000194 ORTHO05D000069 7.3e-24 114.0 110 50.0
MBI15_g41247_MAGBIO Magnolia biondii HOM05D000194 ORTHO05D000069 9.5e-24 113.6 110 50.9
TPR.G920 Trifolium pratense HOM05D000194 ORTHO05D000069 9.5e-24 113.6 110 50.9
Sabra08G0085600 Salix brachista HOM05D000194 ORTHO05D000069 1.2e-23 113.2 110 51.8
arahy.Tifrunner.gnm1.ann1.P7Z3M8 Arachis hypogaea HOM05D000194 ORTHO05D000069 1.6e-23 112.8 108 51.9
Hund05810 Selenicereus undatus HOM05D000194 ORTHO05D000069 2.8e-23 112.1 109 50.5
arahy.Tifrunner.gnm1.ann1.500GQ6 Arachis hypogaea HOM05D000194 ORTHO05D000069 4.7e-23 111.3 108 50.0
Aqoxy3G03778 Aquilegia oxysepala HOM05D000194 ORTHO05D000069 6.2e-23 110.9 105 53.3
Potri.008G113200 Populus trichocarpa HOM05D000194 ORTHO05D000069 6.2e-23 110.9 110 51.8
Nitab4.5_0002491g0020 Nicotiana tabacum HOM05D000194 ORTHO05D000069 8.1e-23 110.5 109 54.1
PGSC0003DMG400008805 Solanum tuberosum HOM05D000194 ORTHO05D000069 8.1e-23 110.5 106 56.6
AUR62007846 Chenopodium quinoa HOM05D000194 ORTHO05D000069 1.8e-22 109.4 109 50.5
Ca_05185_v3 Cicer arietinum L. HOM05D000194 ORTHO05D000069 1.8e-22 109.4 98 51.0
AUR62003039 Chenopodium quinoa HOM05D000194 ORTHO05D000069 2.4e-22 109.0 109 50.5
Nitab4.5_0002309g0020 Nicotiana tabacum HOM05D000194 ORTHO05D000069 2.4e-22 109.0 111 53.2
Psat2g086920 Pisum sativum HOM05D000194 ORTHO05D000069 2.4e-22 109.0 110 51.8
arahy.Tifrunner.gnm1.ann1.U7HMBF Arachis hypogaea HOM05D000194 ORTHO05D000069 3.1e-22 108.6 112 50.9
Oeu021812.1 Olea europaea HOM05D000194 ORTHO05D000069 5.2e-22 107.8 108 53.7
Nitab4.5_0000259g0030 Nicotiana tabacum HOM05D000194 ORTHO05D000069 6.8e-22 107.5 111 52.3
Nn4g23576 Nelumbo nucifera HOM05D000194 ORTHO05D000069 8.9e-22 107.1 80 62.5
Solyc01g010130.4 Solanum lycopersicum HOM05D000194 ORTHO05D000069 1.5e-21 106.3 107 57.0
TWI31G0740 Tripterygium wilfordii HOM05D000194 ORTHO05D000069 1.5e-21 106.3 109 55.0
Gohir.D02G132400 Gossypium hirsutum HOM05D000194 ORTHO05D000069 2.0e-21 105.9 83 59.0
Nitab4.5_0000149g0220 Nicotiana tabacum HOM05D000194 ORTHO05D000069 2.0e-21 105.9 98 55.1
Lj3A1025G48 Lonicera japonica HOM05D000194 ORTHO05D000069 3.4e-21 105.1 101 60.4
ECA233G2717 Erigeron canadensis HOM05D000194 ORTHO05D000069 1.3e-20 103.2 109 49.5
EL10Ac6g14657 Beta vulgaris HOM05D000194 ORTHO05D000069 1.7e-20 102.8 113 51.3
Sopen01g005670 Solanum pennellii HOM05D000194 ORTHO05D000069 2.2e-20 102.4 107 55.1
MSTRG.7719 Avicennia marina HOM05D000194 ORTHO05D000069 2.9e-20 102.1 108 53.7
arahy.Tifrunner.gnm1.ann1.L9MWY5 Arachis hypogaea HOM05D000194 ORTHO05D000069 8.4e-20 100.5 112 50.0
Atru.chr1.1430 Acer truncatum HOM05D000194 ORTHO05D000069 1.1e-19 100.1 91 57.1
PGR102G1318 Punica granatum HOM05D000194 ORTHO05D000069 7.1e-19 97.4 114 49.1
Sc14g0007710 Simmondsia chinensis HOM05D000194 ORTHO05D000069 7.1e-19 97.4 109 44.0
ClCG01G007300 Citrullus lanatus HOM05D000194 ORTHO05D000069 2.7e-18 95.5 110 46.4
CAN.G366.7 Capsicum annuum HOM05D000194 ORTHO05D000069 4.6e-18 94.7 107 50.5
HanXRQChr08g0215071 Helianthus annuus HOM05D000194 ORTHO05D000069 4.6e-18 94.7 109 45.9
CsaV3_5G018750 Cucumis sativus L. HOM05D000194 ORTHO05D000069 6.0e-18 94.4 109 46.8
Haze_11842 Corylus avellana HOM05D000194 ORTHO05D000069 7.8e-18 94.0 157 38.2
Eucgr.B03106 Eucalyptus grandis HOM05D000194 ORTHO05D000069 1.0e-17 93.6 117 47.0
Oeu001638.1 Olea europaea HOM05D000194 ORTHO05D000069 1.3e-17 93.2 108 46.3
Aqoxy3G00573 Aquilegia oxysepala HOM05D000194 ORTHO05D000069 1.7e-17 92.8 109 47.7
Sopen04g001200 Solanum pennellii HOM05D000194 ORTHO05D000069 1.7e-17 92.8 109 49.5
SalBow2G1177 Salvia bowleyana HOM05D000194 ORTHO05D000069 3.0e-17 92.0 97 53.6
Sed0001870 Sechium edule HOM05D000194 ORTHO05D000069 3.0e-17 92.0 108 43.5
HanXRQChr12g0365131 Helianthus annuus HOM05D000194 ORTHO05D000069 5.1e-17 91.3 108 46.3
Sed0000734 Sechium edule HOM05D000194 ORTHO05D000069 5.1e-17 91.3 110 45.5
Solyc04g005220.3 Solanum lycopersicum HOM05D000194 ORTHO05D000069 8.7e-17 90.5 109 49.5
Oeu027420.4 Olea europaea HOM05D000194 ORTHO05D000069 5.6e-16 87.8 104 51.0
HPP92_018234 Vanilla planifolia HOM05D000194 ORTHO05D000069 7.3e-16 87.4 98 44.9
Gohir.A03G107300 Gossypium hirsutum HOM05D000194 ORTHO05D000069 9.6e-16 87.0 68 57.4
Lsat_1_v5_gn_8_36721 Lactuca sativa HOM05D000194 ORTHO05D000069 9.6e-16 87.0 109 45.9
Gorai.005G148300 Gossypium raimondii HOM05D000194 ORTHO05D000069 1.6e-15 86.3 68 55.9
Ah.02g127580 Amaranthus hybridus HOM05D000194 ORTHO05D000069 2.8e-15 85.5 97 43.3
COL.COLO4_27772 Corchorus olitorius HOM05D000194 ORTHO05D000069 4.7e-15 84.7 67 53.7
MBI14_g08221_MAGBIO Magnolia biondii HOM05D000194 ORTHO05D000069 6.2e-15 84.3 98 44.9
CsaV3_5G033600 Cucumis sativus L. HOM05D000194 ORTHO05D000069 7.6e-13 77.4 108 40.7
SEGI_19291 Sequoiadendron giganteum HOM05D000194 ORTHO05D000069 2.2e-12 75.9 115 45.2
ClCG05G023410 Citrullus lanatus HOM05D000194 ORTHO05D000069 2.9e-12 75.5 100 40.0
SGA_v2.0_scaffold287G47204 Striga asiatica HOM05D000194 ORTHO05D000069 1.1e-11 73.6 104 45.2
Migut.L01149 Erythranthe guttata HOM05D000194 ORTHO05D000069 4.2e-11 71.6 64 62.5
PGSC0003DMG400001918 Solanum tuberosum HOM05D000194 ORTHO05D000069 1.6e-10 69.7 75 46.7
TAR629G3476 Trochodendron aralioides HOM05D000194 ORTHO05D000069 2.1e-10 69.3 95 41.1
Ah.03g137530 Amaranthus hybridus HOM05D000194 ORTHO05D000069 6.0e-10 67.8 62 51.6
MELO3C012177.2 Cucumis melo HOM05D000194 ORTHO05D000069 7.8e-10 67.4 90 40.0
Medtr8g065740 Medicago truncatula HOM05D000194 ORTHO05D000069 4.3e-08 61.6 69 46.4
TPR.G29767 Trifolium pratense HOM05D000194 ORTHO05D000069 9.6e-08 60.5 69 47.8
Ca_22678_v3 Cicer arietinum L. HOM05D000194 ORTHO05D000069 6.2e-07 57.8 74 44.6
Nn3g20126 Nelumbo nucifera HOM05D000194 ORTHO05D000069 1.8e-06 56.2 121 33.9
unitig_699.g19903 Utricularia gibba HOM05D000194 ORTHO05D000069 1.8e-06 56.2 82 48.8


User provided reference genes

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