Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047223 Camellia sinensis var. sinensis HOM05D004244 ORTHO05D004964 1.6e-71 272.7 144 100.0
CSS0047414 Camellia sinensis var. sinensis HOM05D004244 ORTHO05D004964 4.0e-70 268.1 144 97.9
Actinidia11381 Actinidia chinensis HOM05D004244 ORTHO05D004964 1.1e-38 163.7 154 63.6
GSVIVG01001856001 Vitis vinifera HOM05D004244 ORTHO05D004964 8.6e-33 144.1 154 55.2
Rhsim02G0048800 Rhododendron simsii HOM05D004244 ORTHO05D004964 7.3e-32 141.0 153 56.9
CiPaw.01G175300 Carya illinoinensis HOM05D004244 ORTHO05D004964 2.8e-31 139.0 153 54.9
Haze_11497 Corylus avellana HOM05D004244 ORTHO05D004964 3.4e-29 132.1 154 52.6
QL06p021978 Quercus lobata HOM05D004244 ORTHO05D004964 5.8e-29 131.3 152 52.0
Hma1.2p1_0112F.1_g054970 Hydrangea macrophylla HOM05D004244 ORTHO05D004964 7.6e-29 131.0 153 52.3
MBI07_g19046_MAGBIO Magnolia biondii HOM05D004244 ORTHO05D004964 4.1e-27 125.2 156 53.2
Aqoxy5G00098 Aquilegia oxysepala HOM05D004244 ORTHO05D004964 7.1e-27 124.4 157 49.7
Dinv27132 Davidia involucrata HOM05D004244 ORTHO05D004964 4.6e-26 121.7 154 51.9
TAR633G1781 Trochodendron aralioides HOM05D004244 ORTHO05D004964 6.6e-25 117.9 156 49.4
Cc03_g06840 Coffea canephora HOM05D004244 ORTHO05D004964 1.5e-24 116.7 146 49.3
Lj6g0017438 Lotus japonicus HOM05D004244 ORTHO05D004964 1.9e-24 116.3 155 47.7
TPR.G23981 Trifolium pratense HOM05D004244 ORTHO05D004964 3.3e-24 115.5 154 49.4
Medtr1g045520 Medicago truncatula HOM05D004244 ORTHO05D004964 4.3e-24 115.2 154 48.7
Nn1g03029 Nelumbo nucifera HOM05D004244 ORTHO05D004964 4.3e-24 115.2 155 49.7
Oeu008815.1 Olea europaea HOM05D004244 ORTHO05D004964 4.3e-24 115.2 154 51.9
Duzib052G0270 Durio zibethinus HOM05D004244 ORTHO05D004964 5.6e-24 114.8 154 48.1
Cfa014824 Carpinus fangiana HOM05D004244 ORTHO05D004964 9.6e-24 114.0 153 48.4
Duzib052G0780 Durio zibethinus HOM05D004244 ORTHO05D004964 2.8e-23 112.5 154 47.4
arahy.Tifrunner.gnm1.ann1.9VYP7U Arachis hypogaea HOM05D004244 ORTHO05D004964 3.6e-23 112.1 155 47.7
arahy.Tifrunner.gnm1.ann1.QYR710 Arachis hypogaea HOM05D004244 ORTHO05D004964 3.6e-23 112.1 155 47.7
Nn3g19830 Nelumbo nucifera HOM05D004244 ORTHO05D004964 4.7e-23 111.7 157 47.1
Ca_11893_v3 Cicer arietinum L. HOM05D004244 ORTHO05D004964 8.1e-23 110.9 154 48.1
FvH4_4g05190 Fragaria vesca HOM05D004244 ORTHO05D004964 1.1e-22 110.5 151 45.7
Potri.010G063300 Populus trichocarpa HOM05D004244 ORTHO05D004964 1.1e-22 110.5 153 46.4
COL.COLO4_16006 Corchorus olitorius HOM05D004244 ORTHO05D004964 1.4e-22 110.2 156 46.2
Glyma.10G132400 Glycine max HOM05D004244 ORTHO05D004964 3.1e-22 109.0 154 45.5
Sopen09g033990 Solanum pennellii HOM05D004244 ORTHO05D004964 4.0e-22 108.6 153 47.7
FAN12G2846 Fragaria x ananassa HOM05D004244 ORTHO05D004964 5.2e-22 108.2 151 45.0
Solyc09g091010.3 Solanum lycopersicum HOM05D004244 ORTHO05D004964 5.2e-22 108.2 153 48.4
Prupe.1G052600 Prunus persica HOM05D004244 ORTHO05D004964 6.9e-22 107.8 153 48.4
Sabra10G0043500 Salix brachista HOM05D004244 ORTHO05D004964 6.9e-22 107.8 152 47.4
FAN17G1122 Fragaria x ananassa HOM05D004244 ORTHO05D004964 2.0e-21 106.3 151 44.4
MD16G1230800 Malus domestica HOM05D004244 ORTHO05D004964 2.0e-21 106.3 154 46.1
Peaxi162Scf00125g01118 Petunia axillaris HOM05D004244 ORTHO05D004964 3.4e-21 105.5 153 43.1
Thecc.04G269100 Theobroma cacao HOM05D004244 ORTHO05D004964 3.4e-21 105.5 154 46.1
Lalb_Chr03g0036891 Lupinus albus HOM05D004244 ORTHO05D004964 4.4e-21 105.1 153 44.4
TAR362G0565 Trochodendron aralioides HOM05D004244 ORTHO05D004964 4.4e-21 105.1 155 46.5
Manes.03G156200 Manihot esculenta HOM05D004244 ORTHO05D004964 7.6e-21 104.4 151 45.7
Phvul.007G227000 Phaseolus vulgaris HOM05D004244 ORTHO05D004964 9.9e-21 104.0 159 44.7
SalBow3G0496 Salvia bowleyana HOM05D004244 ORTHO05D004964 9.9e-21 104.0 152 46.1
SalBow3G1459 Salvia bowleyana HOM05D004244 ORTHO05D004964 9.9e-21 104.0 152 46.1
MD13G1225800 Malus domestica HOM05D004244 ORTHO05D004964 1.3e-20 103.6 154 46.8
PGSC0003DMG402001493 Solanum tuberosum HOM05D004244 ORTHO05D004964 1.7e-20 103.2 158 46.8
Actinidia34761 Actinidia chinensis HOM05D004244 ORTHO05D004964 4.9e-20 101.7 153 44.4
Nitab4.5_0000451g0020 Nicotiana tabacum HOM05D004244 ORTHO05D004964 4.9e-20 101.7 150 45.3
CsaV3_2G012190 Cucumis sativus L. HOM05D004244 ORTHO05D004964 1.1e-19 100.5 165 43.0
VMungo0720G2410 Vigna mungo HOM05D004244 ORTHO05D004964 1.1e-19 100.5 154 44.2
Nitab4.5_0000867g0080 Nicotiana tabacum HOM05D004244 ORTHO05D004964 1.4e-19 100.1 149 44.3
PSO674G0105 Papaver somniferum HOM05D004244 ORTHO05D004964 3.2e-19 99.0 157 44.6
Gohir.A09G231200 Gossypium hirsutum HOM05D004244 ORTHO05D004964 7.1e-19 97.8 146 45.9
CDE11G0045 Ceratophyllum demersum HOM05D004244 ORTHO05D004964 1.6e-18 96.7 158 41.8
Potri.019G023400 Populus trichocarpa HOM05D004244 ORTHO05D004964 1.6e-18 96.7 158 43.0
Gohir.D09G232300 Gossypium hirsutum HOM05D004244 ORTHO05D004964 2.1e-18 96.3 146 46.6
PSO170G0851 Papaver somniferum HOM05D004244 ORTHO05D004964 2.1e-18 96.3 151 43.7
MELO3C023072.2 Cucumis melo HOM05D004244 ORTHO05D004964 4.6e-18 95.1 165 40.6
GSVIVG01026322001 Vitis vinifera HOM05D004244 ORTHO05D004964 7.8e-18 94.4 152 43.4
Actinidia38930 Actinidia chinensis HOM05D004244 ORTHO05D004964 1.0e-17 94.0 153 42.5
ClCG06G007490 Citrullus lanatus HOM05D004244 ORTHO05D004964 1.3e-17 93.6 164 41.5
Gorai.006G255200 Gossypium raimondii HOM05D004244 ORTHO05D004964 3.0e-17 92.4 146 44.5
CANSAT78G2336 Cannabis sativa HOM05D004244 ORTHO05D004964 3.9e-17 92.0 158 43.0
Lsat_1_v5_gn_2_42020 Lactuca sativa HOM05D004244 ORTHO05D004964 6.6e-17 91.3 162 40.1
Sabra19G0033400 Salix brachista HOM05D004244 ORTHO05D004964 1.5e-16 90.1 155 43.2
Rhsim09G0132600 Rhododendron simsii HOM05D004244 ORTHO05D004964 2.5e-16 89.4 157 42.7
MSTRG.24646 Avicennia marina HOM05D004244 ORTHO05D004964 3.3e-16 89.0 157 43.3
Gohir.D11G254600 Gossypium hirsutum HOM05D004244 ORTHO05D004964 3.3e-16 89.0 158 41.8
Gorai.007G273200 Gossypium raimondii HOM05D004244 ORTHO05D004964 3.3e-16 89.0 158 41.8
Ciclev10021373m.g Citrus clementina HOM05D004244 ORTHO05D004964 7.3e-16 87.8 156 41.0
Gohir.A11G244500 Gossypium hirsutum HOM05D004244 ORTHO05D004964 9.6e-16 87.4 158 41.1
Cpa.g.sc59.37 Carica papaya HOM05D004244 ORTHO05D004964 2.1e-15 86.3 153 43.8
Nitab4.5_0000841g0060 Nicotiana tabacum HOM05D004244 ORTHO05D004964 4.8e-15 85.1 153 39.2
Atru.chr2.1111 Acer truncatum HOM05D004244 ORTHO05D004964 6.2e-15 84.7 162 40.1
Duzib106G0844 Durio zibethinus HOM05D004244 ORTHO05D004964 6.2e-15 84.7 158 42.4
Lj2C46G4 Lonicera japonica HOM05D004244 ORTHO05D004964 1.1e-14 84.0 154 42.2
Nitab4.5_0008594g0020 Nicotiana tabacum HOM05D004244 ORTHO05D004964 1.1e-14 84.0 153 38.6
DCAR_030773 Daucus carota HOM05D004244 ORTHO05D004964 2.4e-14 82.8 151 41.7
Psat1g024120 Pisum sativum HOM05D004244 ORTHO05D004964 3.1e-14 82.4 153 40.5
Thecc.05G266700 Theobroma cacao HOM05D004244 ORTHO05D004964 3.1e-14 82.4 156 40.4
Manes.08G141600 Manihot esculenta HOM05D004244 ORTHO05D004964 4.0e-14 82.0 153 37.9
Oeu010184.1 Olea europaea HOM05D004244 ORTHO05D004964 4.0e-14 82.0 153 38.6
Peaxi162Scf00077g00117 Petunia axillaris HOM05D004244 ORTHO05D004964 6.9e-14 81.3 154 40.3
Cpa.g.sc756.3 Carica papaya HOM05D004244 ORTHO05D004964 1.2e-13 80.5 159 37.7
Sc19g0005660 Simmondsia chinensis HOM05D004244 ORTHO05D004964 1.7e-12 76.6 165 33.9
PGR031G0411 Punica granatum HOM05D004244 ORTHO05D004964 4.9e-12 75.1 155 36.8
vmacro10383 Vaccinium macrocarpon HOM05D004244 ORTHO05D004964 1.1e-11 73.9 122 41.0
Atru.chr4.1873 Acer truncatum HOM05D004244 ORTHO05D004964 1.4e-11 73.6 153 36.6
Eucgr.B01738 Eucalyptus grandis HOM05D004244 ORTHO05D004964 1.9e-11 73.2 161 36.6
TWI09G1213 Tripterygium wilfordii HOM05D004244 ORTHO05D004964 3.2e-11 72.4 156 41.0
Eucgr.H02883 Eucalyptus grandis HOM05D004244 ORTHO05D004964 5.4e-11 71.6 151 37.1
Thhalv10021319m.g Eutrema salsugineum HOM05D004244 ORTHO05D004964 5.4e-11 71.6 149 37.6
Cc09_g03010 Coffea canephora HOM05D004244 ORTHO05D004964 7.1e-11 71.2 154 36.4
EL10Ac3g06716 Beta vulgaris HOM05D004244 ORTHO05D004964 1.6e-10 70.1 156 34.6
Carub.0003s0352 Capsella rubella HOM05D004244 ORTHO05D004964 1.6e-10 70.1 150 34.7
PGSC0003DMG402028717 Solanum tuberosum HOM05D004244 ORTHO05D004964 1.6e-10 70.1 152 36.2
Hund07175 Selenicereus undatus HOM05D004244 ORTHO05D004964 2.7e-10 69.3 165 37.0
AL3G14300 Arabidopsis lyrata HOM05D004244 ORTHO05D004964 3.5e-10 68.9 152 36.2
CAN.G4.41 Capsicum annuum HOM05D004244 ORTHO05D004964 4.6e-10 68.6 153 36.6
BcaB04g19340 Brassica carinata HOM05D004244 ORTHO05D004964 6.0e-10 68.2 148 34.5
CARHR078490 Cardamine hirsuta HOM05D004244 ORTHO05D004964 6.0e-10 68.2 150 32.7
Sp3g03210 Schrenkiella parvula HOM05D004244 ORTHO05D004964 7.9e-10 67.8 148 35.8
BcaC01g04379 Brassica carinata HOM05D004244 ORTHO05D004964 1.8e-09 66.6 150 34.7
Solyc04g050270.1 Solanum lycopersicum HOM05D004244 ORTHO05D004964 1.8e-09 66.6 148 35.8
SGA_v2.0_scaffold398G50771 Striga asiatica HOM05D004244 ORTHO05D004964 1.8e-09 66.6 148 41.9
C03p40780 Brassica napus HOM05D004244 ORTHO05D004964 2.3e-09 66.2 150 34.7
BolC3t16346H Brassica oleracea HOM05D004244 ORTHO05D004964 2.3e-09 66.2 150 34.7
Sopen04g021060 Solanum pennellii HOM05D004244 ORTHO05D004964 2.3e-09 66.2 148 35.8
SGA_v2.0_scaffold329G48831 Striga asiatica HOM05D004244 ORTHO05D004964 5.1e-09 65.1 145 35.2
AT3G04310 Arabidopsis thaliana HOM05D004244 ORTHO05D004964 6.7e-09 64.7 151 36.4
BraA03t12533Z Brassica rapa HOM05D004244 ORTHO05D004964 1.5e-08 63.5 148 33.1
Hma1.2p1_0130F.1_g060490 Hydrangea macrophylla HOM05D004244 ORTHO05D004964 1.9e-08 63.2 157 35.0
Aa31LG5G14830 Aethionema arabicum HOM05D004244 ORTHO05D004964 4.3e-08 62.0 151 33.8
SalBow1G0411 Salvia bowleyana HOM05D004244 ORTHO05D004964 5.6e-08 61.6 156 35.3
PGR004G0368 Punica granatum HOM05D004244 ORTHO05D004964 7.4e-08 61.2 157 31.8
HPP92_025817 Vanilla planifolia HOM05D004244 ORTHO05D004964 9.6e-08 60.8 157 34.4
Sc09g0001820 Simmondsia chinensis HOM05D004244 ORTHO05D004964 1.6e-07 60.1 157 38.2
Ciclev10005346m.g Citrus clementina HOM05D004244 ORTHO05D004964 4.8e-07 58.5 180 29.4
MSTRG.9217 Avicennia marina HOM05D004244 ORTHO05D004964 1.1e-06 57.4 155 32.3
EL10Ac4g09763 Beta vulgaris HOM05D004244 ORTHO05D004964 1.1e-06 57.4 159 31.4
Migut.N00322 Erythranthe guttata HOM05D004244 ORTHO05D004964 1.1e-06 57.4 166 30.7
A03p33580 Brassica napus HOM05D004244 ORTHO05D004964 1.4e-06 57.0 148 32.4
Actinidia39939 Actinidia chinensis HOM05D004244 ORTHO05D004964 4.0e-06 55.5 75 49.3
Thhalv10017015m.g Eutrema salsugineum HOM05D004244 ORTHO05D004964 5.3e-06 55.1 159 34.6
AUR62006986 Chenopodium quinoa HOM05D004244 ORTHO05D004964 6.9e-06 54.7 150 34.7
ATR0723G041 Amborella trichopoda HOM05D004244 ORTHO05D004964 9.0e-06 54.3 155 31.0
AUR62000633 Chenopodium quinoa HOM05D004244 ORTHO05D004964 9.0e-06 54.3 87 43.7


User provided reference genes

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