Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047204 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 1.5e-195 686.0 357 100.0
CSS0012077 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 2.8e-189 665.2 357 97.2
Dinv15489 Davidia involucrata HOM05D006917 ORTHO05D008297 7.6e-131 471.1 364 71.2
Hma1.2p1_0565F.1_g179500 Hydrangea macrophylla HOM05D006917 ORTHO05D008297 1.5e-126 456.8 366 69.4
Actinidia30487 Actinidia chinensis HOM05D006917 ORTHO05D008297 6.5e-114 414.8 385 63.4
Atru.chr6.3069 Acer truncatum HOM05D006917 ORTHO05D008297 1.4e-111 407.1 357 63.0
Manes.13G151300 Manihot esculenta HOM05D006917 ORTHO05D008297 2.8e-109 399.4 362 61.3
Cpa.g.sc53.106 Carica papaya HOM05D006917 ORTHO05D008297 1.3e-106 390.6 361 61.2
Cfa014546 Carpinus fangiana HOM05D006917 ORTHO05D008297 1.7e-106 390.2 361 61.2
Haze_13090 Corylus avellana HOM05D006917 ORTHO05D008297 1.9e-105 386.7 360 60.3
Cc05_g06310 Coffea canephora HOM05D006917 ORTHO05D008297 7.2e-105 384.8 257 75.1
GSVIVG01030015001 Vitis vinifera HOM05D006917 ORTHO05D008297 1.2e-104 384.0 257 73.5
Potri.013G146900 Populus trichocarpa HOM05D006917 ORTHO05D008297 1.4e-103 380.6 360 59.4
PGSC0003DMG401021671 Solanum tuberosum HOM05D006917 ORTHO05D008297 1.5e-102 377.1 369 57.7
CANSAT64G1157 Cannabis sativa HOM05D006917 ORTHO05D008297 1.3e-101 374.0 368 58.7
Peaxi162Scf00608g00317 Petunia axillaris HOM05D006917 ORTHO05D008297 2.2e-101 373.2 358 60.1
DCAR_009726 Daucus carota HOM05D006917 ORTHO05D008297 3.7e-101 372.5 363 61.2
COL.COLO4_13687 Corchorus olitorius HOM05D006917 ORTHO05D008297 4.8e-101 372.1 362 59.1
TWI36G0541 Tripterygium wilfordii HOM05D006917 ORTHO05D008297 1.4e-100 370.5 362 58.0
Solyc10g008600.3 Solanum lycopersicum HOM05D006917 ORTHO05D008297 2.4e-100 369.8 364 58.2
CiPaw.03G170000 Carya illinoinensis HOM05D006917 ORTHO05D008297 1.2e-99 367.5 358 59.2
Sopen10g004420 Solanum pennellii HOM05D006917 ORTHO05D008297 1.6e-99 367.1 364 58.0
RcHm_v2.0_Chr2g0161911 Rosa chinensis HOM05D006917 ORTHO05D008297 4.5e-99 365.5 362 56.9
HanXRQChr06g0170991 Helianthus annuus HOM05D006917 ORTHO05D008297 1.7e-98 363.6 343 57.7
Thecc.02G172300 Theobroma cacao HOM05D006917 ORTHO05D008297 1.7e-98 363.6 360 58.1
QL08p037351 Quercus lobata HOM05D006917 ORTHO05D008297 6.5e-98 361.7 359 57.1
THA.LOC104825523 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 6.5e-98 361.7 313 61.3
Eucgr.D00334 Eucalyptus grandis HOM05D006917 ORTHO05D008297 1.5e-97 360.5 344 58.1
MSTRG.18638 Avicennia marina HOM05D006917 ORTHO05D008297 1.9e-97 360.1 370 55.7
Migut.M00331 Erythranthe guttata HOM05D006917 ORTHO05D008297 2.5e-97 359.8 369 56.4
THA.LOC104807893 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 7.2e-97 358.2 320 60.0
Ciclev10015637m.g Citrus clementina HOM05D006917 ORTHO05D008297 9.4e-97 357.8 368 58.4
Lsat_1_v5_gn_3_39800 Lactuca sativa HOM05D006917 ORTHO05D008297 1.2e-96 357.5 357 55.2
Gorai.013G073800 Gossypium raimondii HOM05D006917 ORTHO05D008297 1.6e-96 357.1 357 57.7
Nn1g03886 Nelumbo nucifera HOM05D006917 ORTHO05D008297 3.6e-96 355.9 363 58.4
Prupe.3G231600 Prunus persica HOM05D006917 ORTHO05D008297 4.7e-96 355.5 362 54.4
Duzib132G0607 Durio zibethinus HOM05D006917 ORTHO05D008297 6.1e-96 355.1 328 59.5
ECA246G1823 Erigeron canadensis HOM05D006917 ORTHO05D008297 8.0e-96 354.8 266 66.2
MD09G1093800 Malus domestica HOM05D006917 ORTHO05D008297 1.0e-95 354.4 361 55.1
Gohir.A13G056900 Gossypium hirsutum HOM05D006917 ORTHO05D008297 1.8e-95 353.6 356 57.0
FvH4_6g44760 Fragaria vesca HOM05D006917 ORTHO05D008297 3.0e-95 352.8 362 55.2
FAN02G4118 Fragaria x ananassa HOM05D006917 ORTHO05D008297 3.0e-95 352.8 363 55.1
FAN09G3443 Fragaria x ananassa HOM05D006917 ORTHO05D008297 3.0e-95 352.8 363 55.1
FAN14G5902 Fragaria x ananassa HOM05D006917 ORTHO05D008297 6.8e-95 351.7 362 55.2
Sabra13G0118400 Salix brachista HOM05D006917 ORTHO05D008297 6.8e-95 351.7 367 56.9
ClCG01G000980 Citrullus lanatus HOM05D006917 ORTHO05D008297 2.2e-93 346.7 361 56.0
unitig_746.g26713 Utricularia gibba HOM05D006917 ORTHO05D008297 2.8e-93 346.3 351 55.8
Gohir.D13G065000 Gossypium hirsutum HOM05D006917 ORTHO05D008297 3.7e-93 345.9 257 66.9
PGR042G0968 Punica granatum HOM05D006917 ORTHO05D008297 8.3e-93 344.7 363 55.9
SalBow7G0082 Salvia bowleyana HOM05D006917 ORTHO05D008297 8.3e-93 344.7 408 52.2
BolC7t46080H Brassica oleracea HOM05D006917 ORTHO05D008297 1.1e-92 344.4 341 55.1
VMungo1127G0570 Vigna mungo HOM05D006917 ORTHO05D008297 1.8e-92 343.6 332 56.3
FAN05G2664 Fragaria x ananassa HOM05D006917 ORTHO05D008297 4.1e-92 342.4 359 53.5
Aqoxy3G03605 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 7.0e-92 341.7 359 54.6
PSO210G6334 Papaver somniferum HOM05D006917 ORTHO05D008297 2.0e-91 340.1 369 53.1
Phvul.011G111800 Phaseolus vulgaris HOM05D006917 ORTHO05D008297 3.5e-91 339.3 331 56.2
Sed0009072 Sechium edule HOM05D006917 ORTHO05D008297 1.0e-90 337.8 305 60.0
Carub.0007s1255 Capsella rubella HOM05D006917 ORTHO05D008297 2.2e-90 336.7 345 54.8
PSO832G2257 Papaver somniferum HOM05D006917 ORTHO05D008297 2.2e-90 336.7 369 52.8
AT4G28210 Arabidopsis thaliana HOM05D006917 ORTHO05D008297 5.0e-90 335.5 285 61.1
Sc21g0002460 Simmondsia chinensis HOM05D006917 ORTHO05D008297 6.5e-90 335.1 358 52.5
SGA_v2.0_scaffold70G23465 Striga asiatica HOM05D006917 ORTHO05D008297 8.5e-90 334.7 366 53.0
AL7G24390 Arabidopsis lyrata HOM05D006917 ORTHO05D008297 1.5e-89 334.0 285 61.4
Thhalv10025608m.g Eutrema salsugineum HOM05D006917 ORTHO05D008297 1.9e-89 333.6 356 53.7
A03p57910 Brassica napus HOM05D006917 ORTHO05D008297 2.5e-89 333.2 334 55.1
BraA03t14855Z Brassica rapa HOM05D006917 ORTHO05D008297 4.2e-89 332.4 292 60.3
BcaNung01588 Brassica carinata HOM05D006917 ORTHO05D008297 5.5e-89 332.0 348 54.6
Sp7g26170 Schrenkiella parvula HOM05D006917 ORTHO05D008297 5.5e-89 332.0 285 60.4
EL10Ac9g22343 Beta vulgaris HOM05D006917 ORTHO05D008297 9.5e-89 331.3 364 53.8
C07p56030 Brassica napus HOM05D006917 ORTHO05D008297 1.2e-88 330.9 331 55.9
AUR62044684 Chenopodium quinoa HOM05D006917 ORTHO05D008297 1.2e-88 330.9 364 53.0
Ah.04g154320 Amaranthus hybridus HOM05D006917 ORTHO05D008297 1.6e-88 330.5 285 59.3
Lj3g0010136 Lotus japonicus HOM05D006917 ORTHO05D008297 1.6e-88 330.5 339 55.5
CARHR235920 Cardamine hirsuta HOM05D006917 ORTHO05D008297 1.8e-87 327.0 360 52.2
MELO3C005833.2 Cucumis melo HOM05D006917 ORTHO05D008297 2.3e-87 326.6 360 53.3
Psat7g195960 Pisum sativum HOM05D006917 ORTHO05D008297 4.0e-87 325.9 340 54.1
A01p19630 Brassica napus HOM05D006917 ORTHO05D008297 1.2e-86 324.3 361 51.0
Aa31LG2G22070 Aethionema arabicum HOM05D006917 ORTHO05D008297 2.6e-86 323.2 321 55.5
Hund08056 Selenicereus undatus HOM05D006917 ORTHO05D008297 2.6e-86 323.2 346 52.9
Lalb_Chr19g0135451 Lupinus albus HOM05D006917 ORTHO05D008297 5.7e-86 322.0 348 51.7
MBI19_g29221_MAGBIO Magnolia biondii HOM05D006917 ORTHO05D008297 5.7e-86 322.0 264 62.9
Nitab4.5_0000635g0150 Nicotiana tabacum HOM05D006917 ORTHO05D008297 7.5e-86 321.6 363 53.4
AUR62037382 Chenopodium quinoa HOM05D006917 ORTHO05D008297 1.7e-85 320.5 364 52.5
Ca_20697_v3 Cicer arietinum L. HOM05D006917 ORTHO05D008297 2.2e-85 320.1 358 51.7
Nitab4.5_0003195g0010 Nicotiana tabacum HOM05D006917 ORTHO05D008297 1.8e-84 317.0 233 69.5
TPR.G21667 Trifolium pratense HOM05D006917 ORTHO05D008297 2.4e-84 316.6 329 54.4
Lalb_Chr03g0029201 Lupinus albus HOM05D006917 ORTHO05D008297 5.4e-84 315.5 348 51.1
Glyma.12G107100 Glycine max HOM05D006917 ORTHO05D008297 7.0e-84 315.1 322 55.3
arahy.Tifrunner.gnm1.ann1.RY5XZD Arachis hypogaea HOM05D006917 ORTHO05D008297 9.2e-84 314.7 278 59.0
arahy.Tifrunner.gnm1.ann1.43ZBCD Arachis hypogaea HOM05D006917 ORTHO05D008297 1.2e-83 314.3 345 52.2
BraA01t01896Z Brassica rapa HOM05D006917 ORTHO05D008297 1.6e-83 313.9 337 52.8
Glyma.06G298100 Glycine max HOM05D006917 ORTHO05D008297 2.0e-83 313.5 329 53.5
Lj8P117T42 Lonicera japonica HOM05D006917 ORTHO05D008297 5.9e-83 312.0 236 66.9
CsaV3_5G001130 Cucumis sativus L. HOM05D006917 ORTHO05D008297 2.3e-82 310.1 362 51.4
BcaC06g32638 Brassica carinata HOM05D006917 ORTHO05D008297 2.5e-81 306.6 331 53.8
HPP92_002192 Vanilla planifolia HOM05D006917 ORTHO05D008297 5.6e-81 305.4 269 59.1
Medtr4g046023 Medicago truncatula HOM05D006917 ORTHO05D008297 1.2e-80 304.3 334 52.4
TAR629G2913 Trochodendron aralioides HOM05D006917 ORTHO05D008297 8.9e-79 298.1 300 61.0
CDE12G0159 Ceratophyllum demersum HOM05D006917 ORTHO05D008297 1.2e-78 297.7 363 49.3
C01p24650 Brassica napus HOM05D006917 ORTHO05D008297 2.0e-78 297.0 266 57.5
BcaC09g50505 Brassica carinata HOM05D006917 ORTHO05D008297 5.7e-78 295.4 277 55.2
PGSC0003DMG400029584 Solanum tuberosum HOM05D006917 ORTHO05D008297 1.1e-76 291.2 209 67.5
BolC1t02415H Brassica oleracea HOM05D006917 ORTHO05D008297 2.6e-70 270.0 266 54.1
ATR0693G234 Amborella trichopoda HOM05D006917 ORTHO05D008297 5.4e-60 235.7 231 54.5
MD17G1083500 Malus domestica HOM05D006917 ORTHO05D008297 1.6e-48 197.6 233 51.1
arahy.Tifrunner.gnm1.ann1.C6FW5S Arachis hypogaea HOM05D006917 ORTHO05D008297 3.2e-44 183.3 162 59.9
arahy.Tifrunner.gnm1.ann1.29DNDL Arachis hypogaea HOM05D006917 ORTHO05D008297 2.8e-32 143.7 137 54.7
SEGI_04255 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 6.2e-24 115.9 317 30.9
AagrBONN_evm.TU.Sc2ySwM_228.5823 Anthoceros agrestis HOM05D006917 ORTHO05D008297 2.1e-19 100.9 297 29.0
MD17G1083600 Malus domestica HOM05D006917 ORTHO05D008297 8.7e-18 95.5 77 63.6
SEGI_37556 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 1.3e-16 91.7 196 34.2
Pp3c7_25590 Physcomitrium patens HOM05D037891 ORTHO05D008297 4.8e-08 63.2 233 24.9
Aqoxy3G03603 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 6.3e-08 62.8 93 45.2
Rhsim04G0063600 Rhododendron simsii HOM05D000001 ORTHO05D009825 1.2e-06 58.5 69 55.1
Oeu039864.1 Olea europaea HOM05D006917 ORTHO05D008297 2.0e-06 57.8 130 40.8
ATR0693G306 Amborella trichopoda HOM05D006917 ORTHO05D008297 3.4e-06 57.0 61 55.7


User provided reference genes

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