Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047180 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D110027 6.2e-32 140.2 72 100.0
CSS0043415 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D110544 8.2e-16 86.7 71 71.8
CSS0001609 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 2.0e-09 65.5 35 91.4
CSS0010814 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 2.0e-09 65.5 61 60.7
CSS0017714 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 2.0e-09 65.5 35 91.4
CSS0022214 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 2.0e-09 65.5 35 91.4
CSS0014298 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 5.7e-09 63.9 35 88.6
CSS0031875 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 9.7e-09 63.2 35 88.6
vmacro13883 Vaccinium macrocarpon HOM05D003558 ORTHO05D004392 1.7e-08 62.4 35 82.9
vmacro21480 Vaccinium macrocarpon HOM05D003558 ORTHO05D004392 1.7e-08 62.4 35 82.9
Actinidia22742 Actinidia chinensis HOM05D003558 ORTHO05D004392 2.8e-08 61.6 35 82.9
CSS0024989 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 2.8e-08 61.6 35 80.0
Hma1.2p1_0440F.1_g153570 Hydrangea macrophylla HOM05D003558 ORTHO05D004392 8.2e-08 60.1 36 77.8
CSS0013121 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 1.1e-07 59.7 35 82.9
Lj8A204G66 Lonicera japonica HOM05D003558 ORTHO05D004392 1.8e-07 58.9 35 80.0
Sed0022053 Sechium edule HOM05D003558 ORTHO05D004392 1.8e-07 58.9 35 82.9
HanXRQChr14g0460421 Helianthus annuus HOM05D003558 ORTHO05D004392 2.4e-07 58.5 35 74.3
Dinv38812 Davidia involucrata HOM05D003558 ORTHO05D004392 4.1e-07 57.8 35 77.1
GSVIVG01019594001 Vitis vinifera HOM05D003558 ORTHO05D004392 4.1e-07 57.8 35 77.1
ECA246G0145 Erigeron canadensis HOM05D003558 ORTHO05D004392 5.3e-07 57.4 35 74.3
MSTRG.1797 Avicennia marina HOM05D003558 ORTHO05D004392 6.9e-07 57.0 35 74.3
CiPaw.12G080800 Carya illinoinensis HOM05D003558 ORTHO05D004392 6.9e-07 57.0 39 71.8
Peaxi162Scf00117g00921 Petunia axillaris HOM05D003558 ORTHO05D004392 6.9e-07 57.0 35 77.1
SalBow8G5190 Salvia bowleyana HOM05D003558 ORTHO05D004392 6.9e-07 57.0 35 71.4
Actinidia03832 Actinidia chinensis HOM05D005426 ORTHO05D006996 9.1e-07 56.6 36 69.4
EL10Ac5g12950 Beta vulgaris HOM05D003558 ORTHO05D004392 9.1e-07 56.6 35 71.4
Cc08_g16370 Coffea canephora HOM05D003558 ORTHO05D004392 9.1e-07 56.6 35 71.4
Dinv37501 Davidia involucrata HOM05D003558 ORTHO05D004392 9.1e-07 56.6 35 74.3
Duzib128G1157 Durio zibethinus HOM05D003558 ORTHO05D004392 1.2e-06 56.2 35 74.3
Gohir.1Z049372 Gossypium hirsutum HOM05D003558 ORTHO05D004392 1.2e-06 56.2 35 74.3
Gohir.A08G223500 Gossypium hirsutum HOM05D003558 ORTHO05D004392 1.2e-06 56.2 35 74.3
Gorai.004G260100 Gossypium raimondii HOM05D003558 ORTHO05D004392 1.2e-06 56.2 35 74.3
HanXRQChr15g0472881 Helianthus annuus HOM05D003558 ORTHO05D004392 1.2e-06 56.2 35 71.4
Thecc.05G207600 Theobroma cacao HOM05D003558 ORTHO05D004392 1.5e-06 55.8 35 74.3
Actinidia22185 Actinidia chinensis HOM05D003558 ORTHO05D005715 2.0e-06 55.5 35 71.4
Cpa.g.sc79.5 Carica papaya HOM05D003558 ORTHO05D004392 2.0e-06 55.5 35 77.1
AUR62019874 Chenopodium quinoa HOM05D003558 ORTHO05D004392 2.0e-06 55.5 35 68.6
MELO3C016262.2 Cucumis melo HOM05D003558 ORTHO05D004392 2.0e-06 55.5 35 74.3
Lj4g0003124 Lotus japonicus HOM05D003558 ORTHO05D004392 2.0e-06 55.5 35 74.3
Sabra01G0064500 Salix brachista HOM05D003558 ORTHO05D004392 2.0e-06 55.5 35 74.3
TWI60G0493 Tripterygium wilfordii HOM05D003558 ORTHO05D004392 2.0e-06 55.5 35 71.4
ClCG07G011380 Citrullus lanatus HOM05D003558 ORTHO05D004392 2.6e-06 55.1 35 74.3
COL.COLO4_08911 Corchorus olitorius HOM05D003558 ORTHO05D004392 2.6e-06 55.1 39 64.1
Lsat_1_v5_gn_3_12881 Lactuca sativa HOM05D003558 ORTHO05D004392 2.6e-06 55.1 35 68.6
Lalb_Chr12g0208821 Lupinus albus HOM05D003558 ORTHO05D004392 2.6e-06 55.1 35 71.4
Potri.001G088200 Populus trichocarpa HOM05D003558 ORTHO05D004392 2.6e-06 55.1 35 74.3
TPR.G13178 Trifolium pratense HOM05D003558 ORTHO05D004392 2.6e-06 55.1 35 71.4
TAR425G0004 Trochodendron aralioides HOM05D003558 ORTHO05D004392 2.6e-06 55.1 35 74.3
Ciclev10021697m.g Citrus clementina HOM05D003558 ORTHO05D004392 3.4e-06 54.7 35 74.3
Duzib177G1044 Durio zibethinus HOM05D003558 ORTHO05D004392 3.4e-06 54.7 35 71.4
Eucgr.E00889 Eucalyptus grandis HOM05D003558 ORTHO05D004392 3.4e-06 54.7 35 74.3
Psat0s889g0080 Pisum sativum HOM05D003558 ORTHO05D004392 3.4e-06 54.7 35 71.4
Psat7g261400 Pisum sativum HOM05D003558 ORTHO05D004392 3.4e-06 54.7 35 71.4
QL05p030756 Quercus lobata HOM05D003558 ORTHO05D004392 3.4e-06 54.7 35 71.4
Sc01g0010420 Simmondsia chinensis HOM05D003558 ORTHO05D004392 3.4e-06 54.7 35 68.6
COL.COLO4_23475 Corchorus olitorius HOM05D003558 ORTHO05D004392 4.5e-06 54.3 42 59.5
Glyma.05G127300 Glycine max HOM05D003558 ORTHO05D004392 4.5e-06 54.3 35 71.4
Glyma.08G082000 Glycine max HOM05D003558 ORTHO05D004392 4.5e-06 54.3 35 71.4
Manes.01G045195 Manihot esculenta HOM05D003558 ORTHO05D004392 4.5e-06 54.3 35 71.4
Oeu009980.1 Olea europaea HOM05D003558 ORTHO05D004392 4.5e-06 54.3 34 70.6
Oeu041397.1 Olea europaea HOM05D003558 ORTHO05D004392 4.5e-06 54.3 35 74.3
Phvul.002G197600 Phaseolus vulgaris HOM05D003558 ORTHO05D004392 4.5e-06 54.3 35 71.4
AUR62007010 Chenopodium quinoa HOM05D003558 ORTHO05D004392 5.9e-06 53.9 35 65.7
Nn1g00283 Nelumbo nucifera HOM05D003558 ORTHO05D004392 5.9e-06 53.9 35 68.6
Oeu055020.1 Olea europaea HOM05D003558 ORTHO05D004392 5.9e-06 53.9 35 68.6
Sed0010282 Sechium edule HOM05D003558 ORTHO05D004392 5.9e-06 53.9 49 61.2
TWI81G0268 Tripterygium wilfordii HOM05D003558 ORTHO05D004392 5.9e-06 53.9 35 71.4
Lj3g0002122 Lotus japonicus HOM05D003558 ORTHO05D004392 7.7e-06 53.5 35 74.3
Lalb_Chr07g0188951 Lupinus albus HOM05D003558 ORTHO05D004392 7.7e-06 53.5 35 68.6
Nitab4.5_0002367g0050 Nicotiana tabacum HOM05D003558 ORTHO05D004392 7.7e-06 53.5 35 71.4
Nitab4.5_0002793g0010 Nicotiana tabacum HOM05D003558 ORTHO05D004392 7.7e-06 53.5 35 71.4
PGR042G0055 Punica granatum HOM05D003558 ORTHO05D004392 7.7e-06 53.5 35 71.4


User provided reference genes

Program Settings