Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047172 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.8e-30 135.2 66 100.0
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 7.7e-29 129.8 66 98.5
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.9e-28 127.9 65 98.5
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.8e-28 127.5 66 97.0
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 6.5e-28 126.7 66 97.0
CSS0022095 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 9.4e-27 122.9 66 92.4
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 6.1e-26 120.2 64 89.1
CSS0031036 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 8.0e-26 119.8 66 90.9
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 1.0e-25 119.4 64 89.1
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 1.0e-25 119.4 64 89.1
Lj7A464G38 Lonicera japonica HOM05D006038 ORTHO05D007547 1.0e-25 119.4 65 89.2
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 1.0e-25 119.4 65 87.7
Nitab4.5_0002809g0020 Nicotiana tabacum HOM05D006038 ORTHO05D007547 2.3e-25 118.2 66 83.3
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 2.3e-25 118.2 66 83.3
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 2.3e-25 118.2 66 83.3
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 2.3e-25 118.2 66 83.3
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 2.3e-25 118.2 66 83.3
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 3.0e-25 117.9 64 84.4
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.0e-25 117.5 66 92.4
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 5.2e-25 117.1 65 83.1
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 6.8e-25 116.7 66 83.3
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 6.8e-25 116.7 66 81.8
Oeu027617.1 Olea europaea HOM05D006038 ORTHO05D007547 8.8e-25 116.3 64 84.4
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 8.8e-25 116.3 64 87.5
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 1.5e-24 115.5 66 80.3
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 1.5e-24 115.5 64 84.4
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 2.0e-24 115.2 66 80.3
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 2.0e-24 115.2 66 80.3
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 2.0e-24 115.2 63 84.1
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 2.6e-24 114.8 63 82.5
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 2.6e-24 114.8 63 84.1
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 2.6e-24 114.8 64 85.9
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 2.6e-24 114.8 64 79.7
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 3.4e-24 114.4 64 84.4
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 4.4e-24 114.0 66 81.8
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 4.4e-24 114.0 63 84.1
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 4.4e-24 114.0 63 84.1
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 4.4e-24 114.0 63 84.1
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 5.7e-24 113.6 64 85.9
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 5.7e-24 113.6 64 81.2
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 5.7e-24 113.6 64 81.2
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 5.7e-24 113.6 64 81.2
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 5.7e-24 113.6 64 81.2
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 5.7e-24 113.6 66 80.3
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 7.5e-24 113.2 64 78.1
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 7.5e-24 113.2 64 79.7
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 7.5e-24 113.2 61 86.9
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 9.8e-24 112.8 64 84.4
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 9.8e-24 112.8 62 87.1
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 9.8e-24 112.8 63 82.5
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 9.8e-24 112.8 63 82.5
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 1.3e-23 112.5 64 82.8
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 1.7e-23 112.1 64 79.7
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 1.7e-23 112.1 64 81.2
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 1.7e-23 112.1 66 83.3
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 1.7e-23 112.1 63 82.5
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 1.7e-23 112.1 64 79.7
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 1.7e-23 112.1 64 84.4
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 1.7e-23 112.1 63 82.5
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 2.8e-23 111.3 64 82.8
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 2.8e-23 111.3 63 81.0
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 2.8e-23 111.3 63 81.0
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 8.3e-23 109.8 64 81.2
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 8.3e-23 109.8 63 79.4
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 1.4e-22 109.0 64 73.4
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 1.8e-22 108.6 63 81.0
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 2.4e-22 108.2 66 72.7
CSS0034156 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.1e-22 107.8 66 86.4
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 3.1e-22 107.8 62 83.9
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 4.1e-22 107.5 62 83.9
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 4.1e-22 107.5 62 83.9
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 4.1e-22 107.5 62 83.9
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 4.1e-22 107.5 66 77.3
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 7.0e-22 106.7 66 77.3
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 7.0e-22 106.7 64 78.1
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 9.1e-22 106.3 62 83.9
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 1.6e-21 105.5 64 79.7
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 1.6e-21 105.5 64 71.9
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 2.0e-21 105.1 64 71.9
Os08g0266600 Oryza sativa ssp. japonica HOM05D006038 ORTHO05D007547 4.5e-21 104.0 59 78.0
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 5.9e-21 103.6 63 73.0
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 5.9e-21 103.6 64 70.3
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 1.0e-20 102.8 64 75.0
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 1.0e-20 102.8 66 72.7
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 1.3e-20 102.4 64 73.4
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 1.3e-20 102.4 62 75.8
Sc14g0000990 Simmondsia chinensis HOM05D006038 ORTHO05D007547 3.8e-20 100.9 65 67.7
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 6.6e-20 100.1 58 82.8
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 6.6e-20 100.1 59 74.6
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 1.1e-19 99.4 65 76.9
SEGI_08614 Sequoiadendron giganteum HOM05D006038 ORTHO05D007547 2.8e-18 94.7 65 67.7
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.6e-18 94.4 51 94.1
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 4.7e-18 94.0 55 85.5
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 8.9e-17 89.7 63 63.5
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 8.9e-17 89.7 63 63.5
Nitab4.5_0001036g0170 Nicotiana tabacum HOM05D006038 ORTHO05D007547 1.2e-16 89.4 48 87.5
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 9.8e-16 86.3 47 85.1
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 9.8e-16 86.3 47 85.1
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 9.8e-16 86.3 47 85.1
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 2.8e-15 84.7 47 83.0
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 1.2e-13 79.3 45 82.2
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 1.2e-13 79.3 48 79.2
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 2.7e-13 78.2 47 72.3
Zm00001eb124580 Zea mays HOM05D006038 ORTHO05D007547 4.5e-13 77.4 52 65.4
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 7.8e-13 76.6 60 60.0
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 2.3e-12 75.1 47 74.5
Zm00001eb038770 Zea mays HOM05D006038 ORTHO05D007547 2.3e-12 75.1 53 66.0
Zm00001eb046820 Zea mays HOM05D006038 ORTHO05D007547 2.3e-12 75.1 53 66.0
Zm00001eb051760 Zea mays HOM05D006038 ORTHO05D007547 2.3e-12 75.1 53 66.0
Zm00001eb253640 Zea mays HOM05D006038 ORTHO05D007547 5.0e-12 73.9 56 62.5
Zm00001eb369920 Zea mays HOM05D006038 ORTHO05D007547 1.1e-11 72.8 51 64.7
Pp3c6_28770 Physcomitrium patens HOM05D006038 ORTHO05D007547 4.0e-09 64.3 58 50.0
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 4.4e-08 60.8 58 51.7
Zm00001eb021100 Zea mays HOM05D002913 ORTHO05D026003 4.4e-08 60.8 49 59.2
Zm00001eb156390 Zea mays HOM05D009386 ORTHO05D011419 4.4e-08 60.8 49 59.2
Zm00001eb343430 Zea mays HOM05D002913 ORTHO05D020952 4.4e-08 60.8 49 59.2
Zm00001eb354900 Zea mays HOM05D002913 ORTHO05D026003 4.4e-08 60.8 49 59.2


User provided reference genes

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