Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047124 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 2.0e-138 495.7 242 100.0
Rhsim09G0142000 Rhododendron simsii HOM05D007039 ORTHO05D008886 1.4e-115 419.9 240 83.8
CSS0023700 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 4.1e-112 408.3 240 80.8
Oeu025598.1 Olea europaea HOM05D007039 ORTHO05D008886 7.8e-111 404.1 240 79.6
Dinv11837 Davidia involucrata HOM05D007039 ORTHO05D008886 6.6e-110 401.0 240 79.6
Lj2A32T31 Lonicera japonica HOM05D007039 ORTHO05D008886 6.2e-108 394.4 240 78.3
vmacro10308 Vaccinium macrocarpon HOM05D007039 ORTHO05D008886 4.4e-106 388.3 286 68.5
Prupe.2G067300 Prunus persica HOM05D007039 ORTHO05D008886 5.8e-106 387.9 240 76.2
Sopen04g004820 Solanum pennellii HOM05D007039 ORTHO05D008886 5.8e-106 387.9 242 75.6
PGSC0003DMG400016998 Solanum tuberosum HOM05D007039 ORTHO05D008886 7.5e-106 387.5 242 75.2
Migut.F00878 Erythranthe guttata HOM05D007039 ORTHO05D008886 1.3e-105 386.7 240 75.4
Lsat_1_v5_gn_8_24101 Lactuca sativa HOM05D007039 ORTHO05D008886 1.3e-105 386.7 241 75.9
CiPaw.14G032800 Carya illinoinensis HOM05D007039 ORTHO05D008886 2.9e-105 385.6 240 75.0
Solyc04g009700.3 Solanum lycopersicum HOM05D007039 ORTHO05D008886 1.1e-104 383.6 242 74.8
Cc02_g09650 Coffea canephora HOM05D007039 ORTHO05D008886 1.4e-104 383.3 240 75.4
Cfa011268 Carpinus fangiana HOM05D007039 ORTHO05D008886 1.9e-104 382.9 240 73.3
Oeu036842.1 Olea europaea HOM05D007039 ORTHO05D008886 5.4e-104 381.3 240 75.4
SGA_v2.0_scaffold62G21336 Striga asiatica HOM05D007039 ORTHO05D008886 7.1e-104 380.9 240 74.6
HanXRQChr08g0217501 Helianthus annuus HOM05D007039 ORTHO05D008886 1.6e-103 379.8 241 72.6
MD02G1261300 Malus domestica HOM05D007039 ORTHO05D008886 4.6e-103 378.3 242 73.1
GSVIVG01001001001 Vitis vinifera HOM05D007039 ORTHO05D008886 7.8e-103 377.5 240 72.9
SalBow6G1307 Salvia bowleyana HOM05D007039 ORTHO05D008886 1.7e-102 376.3 240 74.6
Eucgr.J00258 Eucalyptus grandis HOM05D007039 ORTHO05D008886 3.0e-102 375.6 240 72.1
CANSAT56G1368 Cannabis sativa HOM05D007039 ORTHO05D008886 3.9e-102 375.2 237 73.8
Atru.chr12.1023 Acer truncatum HOM05D007039 ORTHO05D008886 1.1e-101 373.6 240 71.2
CAN.G186.55 Capsicum annuum HOM05D007039 ORTHO05D008886 1.1e-101 373.6 242 73.1
TWI63G1767 Tripterygium wilfordii HOM05D007039 ORTHO05D008886 1.9e-101 372.9 239 73.2
FAN03G1588 Fragaria x ananassa HOM05D007039 ORTHO05D008886 3.3e-101 372.1 240 73.3
Thecc.07G140700 Theobroma cacao HOM05D007039 ORTHO05D008886 3.3e-101 372.1 240 72.1
FAN01G2006 Fragaria x ananassa HOM05D007039 ORTHO05D008886 2.8e-100 369.0 240 73.8
FAN06G3803 Fragaria x ananassa HOM05D007039 ORTHO05D008886 2.8e-100 369.0 240 72.9
Manes.07G087400 Manihot esculenta HOM05D007039 ORTHO05D008886 2.8e-100 369.0 237 71.7
Potri.010G238700 Populus trichocarpa HOM05D007039 ORTHO05D008886 2.8e-100 369.0 239 73.2
QL04p044873 Quercus lobata HOM05D007039 ORTHO05D008886 2.3e-99 365.9 240 71.7
RcHm_v2.0_Chr1g0331721 Rosa chinensis HOM05D007039 ORTHO05D008886 2.3e-99 365.9 240 72.9
Sabra10G0186900 Salix brachista HOM05D007039 ORTHO05D008886 3.1e-99 365.5 240 71.7
MD07G1059500 Malus domestica HOM05D007039 ORTHO05D008886 2.0e-98 362.8 242 70.2
Ciclev10016452m.g Citrus clementina HOM05D007039 ORTHO05D008886 1.7e-97 359.8 240 69.2
FAN10G1571 Fragaria x ananassa HOM05D007039 ORTHO05D008886 2.2e-97 359.4 254 69.3
Ca_25665_v3 Cicer arietinum L. HOM05D007039 ORTHO05D008886 3.7e-97 358.6 241 73.0
Hund22275 Selenicereus undatus HOM05D007039 ORTHO05D008886 4.9e-97 358.2 240 69.2
arahy.Tifrunner.gnm1.ann1.2NV5LW Arachis hypogaea HOM05D007039 ORTHO05D008886 1.9e-96 356.3 240 70.8
arahy.Tifrunner.gnm1.ann1.XC1RGZ Arachis hypogaea HOM05D007039 ORTHO05D008886 1.9e-96 356.3 240 70.8
COL.COLO4_17444 Corchorus olitorius HOM05D007039 ORTHO05D008886 1.9e-96 356.3 240 70.4
Medtr1g112080 Medicago truncatula HOM05D007039 ORTHO05D008886 1.2e-95 353.6 240 71.7
Potri.008G020500 Populus trichocarpa HOM05D007039 ORTHO05D008886 1.2e-95 353.6 236 70.3
Glyma.20G110700 Glycine max HOM05D007039 ORTHO05D008886 2.7e-95 352.4 241 70.5
Lalb_Chr06g0166411 Lupinus albus HOM05D007039 ORTHO05D008886 4.6e-95 351.7 240 68.3
TPR.G2471 Trifolium pratense HOM05D007039 ORTHO05D008886 6.0e-95 351.3 240 70.4
THA.LOC104801579 Tarenaya hassleriana HOM05D007039 ORTHO05D008886 1.3e-94 350.1 239 65.7
unitig_748.g8774 Utricularia gibba HOM05D007039 ORTHO05D008886 3.0e-94 349.0 240 68.8
Duzib106G1061 Durio zibethinus HOM05D007039 ORTHO05D008886 3.9e-94 348.6 240 67.9
Lj5g0024269 Lotus japonicus HOM05D007039 ORTHO05D008886 3.9e-94 348.6 237 70.9
TAR623G0720 Trochodendron aralioides HOM05D007039 ORTHO05D008886 8.6e-94 347.4 239 69.0
Gohir.A06G173100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 1.5e-93 346.7 240 67.9
Sc20g0001160 Simmondsia chinensis HOM05D007039 ORTHO05D008886 1.9e-93 346.3 241 66.8
Gorai.010G214000 Gossypium raimondii HOM05D007039 ORTHO05D008886 3.3e-93 345.5 240 67.9
Gohir.D06G182700 Gossypium hirsutum HOM05D007039 ORTHO05D008886 4.3e-93 345.1 240 67.9
Gorai.010G214100 Gossypium raimondii HOM05D007039 ORTHO05D008886 5.6e-93 344.7 240 67.9
Phvul.007G022300 Phaseolus vulgaris HOM05D007039 ORTHO05D008886 5.6e-93 344.7 241 68.5
Gohir.D06G183100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 1.6e-92 343.2 240 67.9
VMungo0720G0617 Vigna mungo HOM05D007039 ORTHO05D008886 3.6e-92 342.0 241 69.3
AUR62041513 Chenopodium quinoa HOM05D007039 ORTHO05D008886 4.7e-92 341.7 240 64.2
Gohir.D06G183000 Gossypium hirsutum HOM05D007039 ORTHO05D008886 1.1e-91 340.5 240 67.5
Psat6g231000 Pisum sativum HOM05D007039 ORTHO05D008886 4.0e-91 338.6 240 69.2
MELO3C019894.2 Cucumis melo HOM05D007039 ORTHO05D008886 8.9e-91 337.4 237 67.9
Nn6g34917 Nelumbo nucifera HOM05D007039 ORTHO05D008886 1.2e-90 337.0 239 65.7
Sed0014501 Sechium edule HOM05D007039 ORTHO05D008886 9.9e-90 334.0 237 67.1
AUR62042080 Chenopodium quinoa HOM05D007039 ORTHO05D008886 1.3e-89 333.6 223 66.4
EL10Ac4g08687 Beta vulgaris HOM05D007039 ORTHO05D008886 4.9e-89 331.6 236 66.5
Nitab4.5_0003927g0060 Nicotiana tabacum HOM05D007039 ORTHO05D008886 1.1e-88 330.5 241 68.0
Peaxi162Scf00195g01020 Petunia axillaris HOM05D007039 ORTHO05D008886 4.2e-88 328.6 241 67.2
Aqoxy2G01207 Aquilegia oxysepala HOM05D007039 ORTHO05D008886 1.6e-87 326.6 236 64.0
Dinv09617 Davidia involucrata HOM05D007039 ORTHO05D008886 3.5e-87 325.5 240 68.8
PSO339G1176 Papaver somniferum HOM05D007039 ORTHO05D008886 4.6e-87 325.1 234 65.4
Ah.06g186600 Amaranthus hybridus HOM05D007039 ORTHO05D008886 7.8e-87 324.3 240 63.8
PSO384G1372 Papaver somniferum HOM05D007039 ORTHO05D008886 7.8e-87 324.3 234 65.0
ClCG08G008260 Citrullus lanatus HOM05D007039 ORTHO05D008886 1.7e-86 323.2 272 59.2
HPP92_006806 Vanilla planifolia HOM05D007039 ORTHO05D008886 3.6e-84 315.5 233 61.8
Os01g0859400 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 1.2e-82 310.5 240 60.0
Zm00001eb366890 Zea mays HOM05D007039 ORTHO05D008886 2.0e-82 309.7 241 59.3
Zm00001eb147230 Zea mays HOM05D007039 ORTHO05D008886 3.4e-82 308.9 241 58.9
TAR633G1803 Trochodendron aralioides HOM05D007039 ORTHO05D008886 9.9e-82 307.4 239 60.3
Cpa.g.sc56.15 Carica papaya HOM05D007039 ORTHO05D008886 9.3e-80 300.8 183 71.6
PGSC0003DMG400023289 Solanum tuberosum HOM05D007039 ORTHO05D008886 1.3e-76 290.4 183 73.8
Oeu036841.1 Olea europaea HOM05D007039 ORTHO05D008886 2.8e-76 289.3 182 74.7
ECA233G2799 Erigeron canadensis HOM05D007039 ORTHO05D008886 8.1e-76 287.7 186 68.8
CSS0008887 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 3.4e-74 282.3 187 73.8
MSTRG.9060 Avicennia marina HOM05D007039 ORTHO05D008886 1.7e-73 280.0 182 72.0
HPP92_009745 Vanilla planifolia HOM05D007039 ORTHO05D008886 6.4e-73 278.1 231 55.0
HPP92_009768 Vanilla planifolia HOM05D007039 ORTHO05D008886 1.4e-72 276.9 231 54.5
Glyma.10G279000 Glycine max HOM05D007039 ORTHO05D008886 4.2e-72 275.4 237 61.6
FvH4_7g05130 Fragaria vesca HOM05D007039 ORTHO05D008886 5.4e-72 275.0 182 72.0
CSS0041399 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 6.7e-70 268.1 178 75.3
Eucgr.J00257 Eucalyptus grandis HOM05D007039 ORTHO05D008886 1.5e-69 266.9 182 69.2
PGR142G0235 Punica granatum HOM05D007039 ORTHO05D008886 2.4e-67 259.6 181 65.7
CsaV3_6G004220 Cucumis sativus L. HOM05D007039 ORTHO05D008886 5.8e-66 255.0 180 66.7
Zm00001eb092690 Zea mays HOM05D007039 ORTHO05D008886 2.9e-65 252.7 236 49.2
Os12g0152800 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 4.9e-65 251.9 237 48.5
Mapoly0010s0050 Marchantia polymorpha HOM05D007039 ORTHO05D008886 1.0e-62 244.2 227 48.9
SMO367G0592 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 2.2e-57 226.5 230 50.0
Pp3c15_5790 Physcomitrium patens HOM05D007039 ORTHO05D008886 1.1e-56 224.2 229 45.9
AagrBONN_evm.TU.Sc2ySwM_228.3073 Anthoceros agrestis HOM05D007039 ORTHO05D008886 2.3e-54 216.5 181 50.3
AagrBONN_evm.TU.Sc2ySwM_362.1562 Anthoceros agrestis HOM05D007039 ORTHO05D008886 5.1e-54 215.3 237 43.0
CBR_g32363 Chara braunii HOM05D007039 ORTHO05D008886 1.5e-53 213.8 205 47.3
CDE08G0883 Ceratophyllum demersum HOM05D007039 ORTHO05D008886 1.9e-48 196.8 147 55.1
DCAR_019005 Daucus carota HOM05D007039 ORTHO05D008886 3.9e-46 189.1 109 74.3
Zm00001eb197030 Zea mays HOM05D007039 ORTHO05D008886 6.7e-46 188.3 178 46.6
SMO353G0277 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 8.8e-38 161.4 182 46.7
Nitab4.5_0000691g0070 Nicotiana tabacum HOM05D007039 ORTHO05D008886 1.5e-32 144.1 240 39.2
Cre01.g018100 Chlamydomonas reinhardtii HOM05D007039 ORTHO05D008886 7.2e-32 141.7 203 35.0
MD04G1248500 Malus domestica HOM05D007039 ORTHO05D008886 3.6e-31 139.4 105 67.6
PRCOL_00002076 Prasinoderma coloniale HOM05D007039 ORTHO05D008886 6.1e-23 112.1 238 26.5


User provided reference genes

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