Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047120 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 6.1e-85 317.4 154 100.0
CSS0004443 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.8e-84 315.8 154 99.4
CSS0001174 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-80 303.1 154 94.8
CSS0001345 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-80 303.1 154 94.8
CSS0013307 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-80 303.1 154 94.8
CSS0017826 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-80 303.1 154 94.8
CSS0026447 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-80 303.1 154 94.8
CSS0026772 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-80 303.1 154 94.8
CSS0049921 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-80 303.1 154 94.8
CSS0003769 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.2e-78 295.0 154 91.6
CSS0029753 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.1e-44 183.7 137 62.0
CSS0004685 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.1e-44 182.2 137 62.0
CSS0008205 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.1e-44 182.2 137 62.0
CSS0022173 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.1e-44 182.2 137 62.0
CSS0031004 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.1e-44 182.2 137 62.0
CSS0034332 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.1e-44 182.2 137 62.0
CSS0045394 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.1e-44 182.2 137 62.0
CSS0047376 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-43 180.3 137 61.3
CSS0038208 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.5e-43 179.9 137 60.6
CSS0003759 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.6e-43 179.1 137 60.6
CSS0021747 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.4e-43 178.3 137 61.3
CSS0033268 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.4e-43 178.3 137 61.3
Rhsim11G0007300 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.3e-42 176.8 136 58.1
Rhsim05G0212100 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.7e-42 176.4 136 58.1
Rhsim02G0017800 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.2e-42 176.0 136 57.4
Rhsim01G0156700 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.1e-40 169.5 138 55.1
Rhsim11G0057000 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.6e-40 168.3 138 55.1
Rhsim06G0076200 Rhododendron simsii HOM05D000107 ORTHO05D009882 5.1e-39 164.9 138 53.6
Rhsim03G0060900 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.3e-38 161.8 137 53.3
Rhsim05G0032900 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.3e-38 161.0 137 52.6
Rhsim06G0104000 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.6e-37 158.7 137 52.6
Rhsim01G0150700 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.7e-37 158.3 132 53.8
Rhsim06G0120600 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.2e-37 157.9 137 51.8
RhsimUnG0041700 Rhododendron simsii HOM05D007798 ORTHO05D009882 8.1e-37 157.5 137 51.1
RhsimUnG0063700 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.3e-36 156.0 137 51.1
Rhsim02G0156600 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.6e-35 152.5 137 50.4
Rhsim01G0063300 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.3e-34 150.2 134 54.5
Rhsim11G0017600 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.3e-30 135.6 110 56.4
Actinidia33688 Actinidia chinensis HOM05D007798 ORTHO05D009882 2.8e-29 132.5 110 53.6
QL05p075545 Quercus lobata HOM05D007798 ORTHO05D009882 3.6e-29 132.1 137 44.5
QL02p083298 Quercus lobata HOM05D007798 ORTHO05D009882 8.1e-29 131.0 137 44.5
QL05p078054 Quercus lobata HOM05D007798 ORTHO05D009882 1.1e-28 130.6 137 44.5
QL04p082690 Quercus lobata HOM05D007798 ORTHO05D009882 5.2e-28 128.3 137 43.8
QL05p006610 Quercus lobata HOM05D007798 ORTHO05D009882 1.2e-27 127.1 137 43.8
Rhsim11G0005600 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.5e-27 126.7 137 46.7
Rhsim11G0015900 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.9e-26 122.5 108 49.1
Actinidia04231 Actinidia chinensis HOM05D007798 ORTHO05D009882 1.7e-23 113.2 136 41.9
Rhsim12G0212200 Rhododendron simsii HOM05D007798 ORTHO05D009882 7.3e-22 107.8 107 50.5
Hma1.2p1_0849F.1_g228030 Hydrangea macrophylla HOM05D007798 ORTHO05D009882 1.6e-21 106.7 133 39.1
Rhsim09G0073700 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.3e-20 101.7 86 55.8
vmacro12525 Vaccinium macrocarpon HOM05D007798 ORTHO05D009882 1.9e-17 93.2 88 47.7
RhsimUnG0235000 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.2e-17 92.4 89 50.6
CSS0004734 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.4e-17 91.7 71 67.6
CSS0021921 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 7.1e-17 91.3 63 71.4
Rhsim02G0157700 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.3e-17 90.9 77 49.4
Actinidia03841 Actinidia chinensis HOM05D007798 ORTHO05D009882 2.1e-16 89.7 87 48.3
Hma1.2p1_0613F.1_g189140 Hydrangea macrophylla HOM05D007798 ORTHO05D009882 3.5e-16 89.0 92 44.6
Actinidia07485 Actinidia chinensis HOM05D007798 ORTHO05D009882 1.9e-14 83.2 79 43.0
Rhsim05G0057700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.6e-13 80.1 78 50.0
Rhsim11G0003100 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.8e-12 76.6 60 53.3
CSS0035454 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D015543 5.3e-12 75.1 73 50.7
Rhsim09G0076000 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.3e-12 75.1 62 53.2
Rhsim03G0114400 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.6e-11 72.8 60 55.0
CSS0032723 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.2e-10 69.7 39 82.1
vmacro17806 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 3.8e-10 68.9 131 31.3
vmacro23182 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 3.8e-10 68.9 131 31.3
Actinidia38754 Actinidia chinensis HOM05D007798 ORTHO05D009882 8.4e-10 67.8 99 32.3
Rhsim10G0213800 Rhododendron simsii HOM05D008549 ORTHO05D010234 1.6e-08 63.5 129 28.7
vmacro07116 Vaccinium macrocarpon HOM05D001028 ORTHO05D000827 1.6e-08 63.5 56 51.8
Rhsim09G0060200 Rhododendron simsii HOM05D008549 ORTHO05D010234 2.7e-08 62.8 124 29.8
QL93p0053_0646 Quercus lobata HOM05D007798 ORTHO05D009882 1.3e-07 60.5 84 34.5
MBI13_g12520_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.0e-07 59.3 131 29.0
MBI12_g43234_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.9e-07 58.9 131 28.2
MBI02_g29975_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.1e-07 58.5 126 27.8
MBI07_g22513_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.7e-07 58.2 133 26.3
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.1e-06 57.4 125 28.8
MBI19_g18856_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.5e-06 57.0 131 26.7
Rhsim04G0116500 Rhododendron simsii HOM05D008549 ORTHO05D010234 2.5e-06 56.2 109 27.5
CSS0011214 Camellia sinensis var. sinensis HOM05D017353 ORTHO05D009882 3.3e-06 55.8 77 39.0
MBI05_g43492_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.3e-06 55.8 140 25.7
MBI09_g39165_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.3e-06 55.8 109 31.2
CSS0044986 Camellia sinensis var. sinensis HOM05D017353 ORTHO05D009882 4.3e-06 55.5 58 48.3
Hma1.2p1_0101F.1_g049380 Hydrangea macrophylla HOM05D005507 ORTHO05D009882 4.3e-06 55.5 45 46.7
MBI18_g17722_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.4e-06 54.7 113 26.5
MBI19_g30599_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 9.6e-06 54.3 131 26.7


User provided reference genes

Program Settings