Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047105 Camellia sinensis var. sinensis HOM05D005479 ORTHO05D007756 2.7e-115 418.7 214 100.0
CSS0018477 Camellia sinensis var. sinensis HOM05D005479 ORTHO05D007756 2.4e-111 405.6 217 96.3
CSS0033581 Camellia sinensis var. sinensis HOM05D005479 ORTHO05D007756 6.4e-109 397.5 229 91.3
CSS0025893 Camellia sinensis var. sinensis HOM05D005479 ORTHO05D007756 6.5e-77 291.2 245 70.6
CSS0032146 Camellia sinensis var. sinensis HOM05D005479 ORTHO05D007756 8.5e-61 237.7 126 93.7
Dinv20863 Davidia involucrata HOM05D005479 ORTHO05D007756 1.5e-52 210.3 125 81.6
Actinidia05775 Actinidia chinensis HOM05D005479 ORTHO05D007756 9.4e-52 207.6 126 79.4
Rhsim07G0075700 Rhododendron simsii HOM05D005479 ORTHO05D007756 6.8e-50 201.4 126 79.4
Hma1.2p1_0083F.1_g042810 Hydrangea macrophylla HOM05D005479 ORTHO05D007756 1.5e-49 200.3 125 78.4
Hma1.2p1_0083F.1_g042820 Hydrangea macrophylla HOM05D005479 ORTHO05D007756 1.5e-49 200.3 125 78.4
TAR624G0950 Trochodendron aralioides HOM05D005479 ORTHO05D007756 4.4e-49 198.7 126 75.4
TAR624G1307 Trochodendron aralioides HOM05D005479 ORTHO05D007756 4.4e-49 198.7 126 75.4
Cc02_g31990 Coffea canephora HOM05D005479 ORTHO05D007756 2.2e-48 196.4 126 75.4
Lj7A489G24 Lonicera japonica HOM05D005479 ORTHO05D007756 4.9e-48 195.3 126 73.8
Sc09g0003880 Simmondsia chinensis HOM05D005479 ORTHO05D007756 1.1e-47 194.1 126 72.2
Nn7g38390 Nelumbo nucifera HOM05D005479 ORTHO05D007756 3.5e-46 189.1 126 70.6
GSVIVG01021825001 Vitis vinifera HOM05D005479 ORTHO05D007756 3.5e-46 189.1 126 73.0
Ciclev10000348m.g Citrus clementina HOM05D005479 ORTHO05D007756 2.9e-45 186.0 126 69.8
Eucgr.H04377 Eucalyptus grandis HOM05D005479 ORTHO05D007756 3.8e-45 185.7 126 66.7
TAR624G0794 Trochodendron aralioides HOM05D005479 ORTHO05D007756 5.0e-45 185.3 126 70.6
Cfa006446 Carpinus fangiana HOM05D005479 ORTHO05D007756 6.6e-45 184.9 125 71.2
DCAR_029737 Daucus carota HOM05D005479 ORTHO05D007756 8.6e-45 184.5 126 69.8
Aqoxy1G01374 Aquilegia oxysepala HOM05D005479 ORTHO05D007756 1.1e-44 184.1 126 70.6
SGA_v2.0_scaffold81G26086 Striga asiatica HOM05D005479 ORTHO05D007756 2.5e-44 183.0 126 71.4
Atru.chr2.800 Acer truncatum HOM05D005479 ORTHO05D007756 3.3e-44 182.6 126 70.6
Hund22122 Selenicereus undatus HOM05D005479 ORTHO05D007756 4.3e-44 182.2 126 68.3
RcHm_v2.0_Chr3g0451381 Rosa chinensis HOM05D005479 ORTHO05D007756 5.6e-44 181.8 125 70.4
Sopen01g041110 Solanum pennellii HOM05D005479 ORTHO05D007756 5.6e-44 181.8 126 69.8
Manes.08G133100 Manihot esculenta HOM05D005479 ORTHO05D007756 1.2e-43 180.6 126 71.4
Thecc.05G286400 Theobroma cacao HOM05D005479 ORTHO05D007756 1.6e-43 180.3 126 68.3
QL03p025023 Quercus lobata HOM05D005479 ORTHO05D007756 2.8e-43 179.5 125 70.4
CiPaw.07G065500 Carya illinoinensis HOM05D005479 ORTHO05D007756 3.6e-43 179.1 125 67.2
Solyc01g097440.3 Solanum lycopersicum HOM05D005479 ORTHO05D007756 3.6e-43 179.1 126 69.0
COL.COLO4_15310 Corchorus olitorius HOM05D005479 ORTHO05D007756 4.7e-43 178.7 126 68.3
FvH4_6g03130 Fragaria vesca HOM05D005479 ORTHO05D007756 4.7e-43 178.7 125 69.6
FAN05G1441 Fragaria x ananassa HOM05D005479 ORTHO05D007756 4.7e-43 178.7 125 69.6
FAN05G3323 Fragaria x ananassa HOM05D005479 ORTHO05D007756 4.7e-43 178.7 125 69.6
FAN14G5841 Fragaria x ananassa HOM05D005479 ORTHO05D007756 4.7e-43 178.7 125 69.6
Prupe.6G341700 Prunus persica HOM05D005479 ORTHO05D007756 8.0e-43 177.9 125 67.2
Gohir.D11G263500 Gossypium hirsutum HOM05D005479 ORTHO05D007756 1.0e-42 177.6 126 69.8
Gorai.007G283500 Gossypium raimondii HOM05D005479 ORTHO05D007756 1.0e-42 177.6 126 69.8
CAN.G134.108 Capsicum annuum HOM05D005479 ORTHO05D007756 1.4e-42 177.2 126 66.7
Potri.013G039600 Populus trichocarpa HOM05D005479 ORTHO05D007756 1.8e-42 176.8 126 66.7
Glyma.19G243900 Glycine max HOM05D005479 ORTHO05D007756 3.0e-42 176.0 125 68.8
MD12G1238800 Malus domestica HOM05D005479 ORTHO05D007756 4.0e-42 175.6 125 68.0
TWI74G0680 Tripterygium wilfordii HOM05D005479 ORTHO05D007756 5.2e-42 175.3 126 68.3
Glyma.03G246500 Glycine max HOM05D005479 ORTHO05D007756 6.8e-42 174.9 125 68.8
Sabra13G0037000 Salix brachista HOM05D005479 ORTHO05D007756 6.8e-42 174.9 126 66.7
EL10Ac4g09118 Beta vulgaris HOM05D005479 ORTHO05D007756 1.5e-41 173.7 126 66.7
Duzib177G1118 Durio zibethinus HOM05D005479 ORTHO05D007756 1.5e-41 173.7 126 65.9
Gohir.A11G253600 Gossypium hirsutum HOM05D005479 ORTHO05D007756 3.4e-41 172.6 126 69.0
SalBow4G0205 Salvia bowleyana HOM05D005479 ORTHO05D007756 4.4e-41 172.2 126 67.5
SalBow4G0458 Salvia bowleyana HOM05D005479 ORTHO05D007756 4.4e-41 172.2 126 67.5
PGR004G2522 Punica granatum HOM05D005479 ORTHO05D007756 7.5e-41 171.4 126 63.5
Ah.06g192270 Amaranthus hybridus HOM05D005479 ORTHO05D007756 9.8e-41 171.0 125 65.6
Ca_09415_v3 Cicer arietinum L. HOM05D005479 ORTHO05D007756 9.8e-41 171.0 126 64.3
ECA232G3664 Erigeron canadensis HOM05D005479 ORTHO05D007756 1.7e-40 170.2 126 66.7
Psat3g007760 Pisum sativum HOM05D005479 ORTHO05D007756 1.7e-40 170.2 126 64.3
CANSAT54G0735 Cannabis sativa HOM05D005479 ORTHO05D007756 2.2e-40 169.9 126 66.7
BolC7t44530H Brassica oleracea HOM05D005479 ORTHO05D007756 2.9e-40 169.5 126 67.5
TPR.G7013 Trifolium pratense HOM05D005479 ORTHO05D007756 3.7e-40 169.1 126 65.1
Cpa.g.sc117.80 Carica papaya HOM05D005479 ORTHO05D007756 4.9e-40 168.7 126 63.5
C07p39970 Brassica napus HOM05D005479 ORTHO05D007756 6.4e-40 168.3 126 66.7
unitig_21.g20055 Utricularia gibba HOM05D005479 ORTHO05D007756 6.4e-40 168.3 125 63.2
Medtr7g114940 Medicago truncatula HOM05D005479 ORTHO05D007756 1.1e-39 167.5 126 64.3
THA.LOC104818635 Tarenaya hassleriana HOM05D005479 ORTHO05D007756 1.1e-39 167.5 126 64.3
arahy.Tifrunner.gnm1.ann1.9C3ED3 Arachis hypogaea HOM05D005479 ORTHO05D007756 1.4e-39 167.2 125 64.8
arahy.Tifrunner.gnm1.ann1.A0PUBP Arachis hypogaea HOM05D005479 ORTHO05D007756 1.4e-39 167.2 125 64.8
Haze_04347 Corylus avellana HOM05D005479 ORTHO05D007756 1.4e-39 167.2 125 64.8
Lj1g0002084 Lotus japonicus HOM05D005479 ORTHO05D007756 1.8e-39 166.8 126 63.5
Phvul.006G100800 Phaseolus vulgaris HOM05D005479 ORTHO05D007756 2.4e-39 166.4 125 64.8
MELO3C004372.2 Cucumis melo HOM05D005479 ORTHO05D007756 4.1e-39 165.6 125 65.6
VMungo0540G0884 Vigna mungo HOM05D005479 ORTHO05D007756 4.1e-39 165.6 125 64.0
Carub.0008s0944 Capsella rubella HOM05D005479 ORTHO05D007756 5.4e-39 165.2 126 64.3
CsaV3_2G004220 Cucumis sativus L. HOM05D005479 ORTHO05D007756 5.4e-39 165.2 125 65.6
Sed0025675 Sechium edule HOM05D005479 ORTHO05D007756 9.2e-39 164.5 125 64.0
CARHR287990 Cardamine hirsuta HOM05D005479 ORTHO05D007756 4.6e-38 162.2 130 60.0
Thhalv10003714m.g Eutrema salsugineum HOM05D005479 ORTHO05D007756 5.9e-38 161.8 126 65.9
AT5G49570 Arabidopsis thaliana HOM05D005479 ORTHO05D007756 7.8e-38 161.4 126 63.5
A06p38260 Brassica napus HOM05D005479 ORTHO05D007756 7.8e-38 161.4 126 64.3
BraA06t26741Z Brassica rapa HOM05D005479 ORTHO05D007756 7.8e-38 161.4 126 64.3
Sp2g19870 Schrenkiella parvula HOM05D005479 ORTHO05D007756 7.8e-38 161.4 126 65.1
ATR0763G186 Amborella trichopoda HOM05D005479 ORTHO05D007756 1.3e-37 160.6 126 62.7
ClCG02G016550 Citrullus lanatus HOM05D005479 ORTHO05D007756 1.7e-37 160.2 125 64.0
AL8G23370 Arabidopsis lyrata HOM05D005479 ORTHO05D007756 2.3e-37 159.8 126 63.5
Prupe.6G342000 Prunus persica HOM05D005479 ORTHO05D007756 3.9e-37 159.1 120 62.5
SHI18393 Sapria himalayana HOM05D005479 ORTHO05D007756 1.9e-36 156.8 126 60.3
CDE11G1080 Ceratophyllum demersum HOM05D005479 ORTHO05D007756 2.5e-36 156.4 126 62.7
Eucgr.H04378 Eucalyptus grandis HOM05D005479 ORTHO05D007756 2.5e-36 156.4 126 59.5
Aa31LG11G8350 Aethionema arabicum HOM05D005479 ORTHO05D007756 1.2e-35 154.1 126 61.1
Migut.N01906 Erythranthe guttata HOM05D005479 ORTHO05D007756 6.2e-35 151.8 126 61.1
HanXRQChr09g0254821 Helianthus annuus HOM05D005479 ORTHO05D007756 1.0e-34 151.0 126 60.3
SEGI_17604 Sequoiadendron giganteum HOM05D005479 ORTHO05D007756 7.5e-33 144.8 126 54.0
vmacro13830 Vaccinium macrocarpon HOM05D005479 ORTHO05D007756 9.8e-33 144.4 105 74.3
vmacro23344 Vaccinium macrocarpon HOM05D005479 ORTHO05D007756 9.8e-33 144.4 105 74.3
Nitab4.5_0004469g0060 Nicotiana tabacum HOM05D005479 ORTHO05D007756 4.9e-32 142.1 105 68.6
CSS0023004 Camellia sinensis var. sinensis HOM05D002732 ORTHO05D002955 1.1e-31 141.0 112 67.0
Nitab4.5_0005582g0050 Nicotiana tabacum HOM05D005479 ORTHO05D007756 7.0e-31 138.3 105 66.7
Eucgr.H04379 Eucalyptus grandis HOM05D005479 ORTHO05D007756 2.7e-30 136.3 119 58.0
Lalb_Chr15g0076821 Lupinus albus HOM05D005479 ORTHO05D007756 3.5e-30 136.0 125 54.4
Peaxi162Scf00282g00225 Petunia axillaris HOM05D005479 ORTHO05D007756 2.3e-29 133.3 105 63.8
PSO541G1403 Papaver somniferum HOM05D005479 ORTHO05D007756 5.0e-29 132.1 126 54.0
PSO675G4284 Papaver somniferum HOM05D005479 ORTHO05D007756 2.8e-27 126.3 126 52.4
SMO367G0934 Selaginella moellendorffii HOM05D005479 ORTHO05D007756 8.1e-27 124.8 125 52.0
SMO367G1212 Selaginella moellendorffii HOM05D005479 ORTHO05D007756 8.1e-27 124.8 125 52.0
AUR62004929 Chenopodium quinoa HOM05D005479 ORTHO05D007756 1.2e-25 120.9 105 60.0
Lsat_1_v5_gn_4_140660 Lactuca sativa HOM05D005479 ORTHO05D007756 2.0e-25 120.2 126 50.0
Pp3c4_6120 Physcomitrium patens HOM05D005479 ORTHO05D007756 5.8e-25 118.6 125 47.2
CSS0035646 Camellia sinensis var. sinensis HOM05D001027 ORTHO05D000844 1.4e-23 114.0 58 94.8
CSS0046266 Camellia sinensis var. sinensis HOM05D001027 ORTHO05D000844 1.4e-23 114.0 58 94.8
Mapoly0021s0092 Marchantia polymorpha HOM05D005479 ORTHO05D007756 9.2e-23 111.3 125 46.4
Os07g0497400 Oryza sativa ssp. japonica HOM05D005479 ORTHO05D007756 2.3e-21 106.7 122 45.9
Zm00001eb105420 Zea mays HOM05D005479 ORTHO05D007756 5.1e-21 105.5 75 68.0
CBR_g7957 Chara braunii HOM05D005479 ORTHO05D007756 5.6e-20 102.1 129 43.4
PGSC0003DMG400019450 Solanum tuberosum HOM05D005479 ORTHO05D007756 1.8e-18 97.1 77 62.3
PRCOL_00003670 Prasinoderma coloniale HOM05D005479 ORTHO05D007756 5.8e-17 92.0 134 39.6
SMO367G0055 Selaginella moellendorffii HOM05D005479 ORTHO05D007756 1.4e-15 87.4 122 40.2
SMO367G0213 Selaginella moellendorffii HOM05D005479 ORTHO05D007756 1.4e-15 87.4 122 40.2
Cfa027061 Carpinus fangiana HOM05D005479 ORTHO05D007756 3.0e-13 79.7 116 37.9
AUR62001022 Chenopodium quinoa HOM05D005479 ORTHO05D007756 5.1e-13 79.0 76 53.9
Cre01.g053900 Chlamydomonas reinhardtii HOM05D005479 ORTHO05D007756 3.6e-11 72.8 131 37.4
Actinidia39094 Actinidia chinensis HOM05D001027 ORTHO05D000844 2.4e-10 70.1 82 48.8
MCO12G063 Micromonas commoda HOM05D005479 ORTHO05D007756 3.1e-10 69.7 44 61.4
Oeu040763.1 Olea europaea HOM05D005479 ORTHO05D007756 7.6e-09 65.1 41 78.0
Actinidia26042 Actinidia chinensis HOM05D001027 ORTHO05D000844 1.4e-07 60.8 66 48.5
Hma1.2p1_1128F.1_g259680 Hydrangea macrophylla HOM05D001027 ORTHO05D000844 1.4e-07 60.8 68 52.9
QL05p009530 Quercus lobata HOM05D001027 ORTHO05D000844 4.2e-07 59.3 70 45.7
Sed0000203 Sechium edule HOM05D001027 ORTHO05D000844 1.6e-06 57.4 70 42.9
ClCG07G013890 Citrullus lanatus HOM05D001027 ORTHO05D000844 2.1e-06 57.0 70 44.3


User provided reference genes

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