Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047094 Camellia sinensis var. sinensis HOM05D007982 ORTHO05D010255 2.7e-297 1024.6 528 100.0
RhsimUnG0103100 Rhododendron simsii HOM05D007982 ORTHO05D010255 2.8e-206 722.2 536 71.8
Hma1.2p1_0044F.1_g026360 Hydrangea macrophylla HOM05D007982 ORTHO05D010255 2.6e-196 689.1 522 69.2
Dinv07497 Davidia involucrata HOM05D007982 ORTHO05D010255 2.1e-193 679.5 485 74.2
QL01p000856 Quercus lobata HOM05D007982 ORTHO05D010255 5.9e-188 661.4 460 72.0
GSVIVG01034385001 Vitis vinifera HOM05D007982 ORTHO05D010255 2.6e-183 646.0 461 72.5
Prupe.1G349600 Prunus persica HOM05D007982 ORTHO05D010255 3.1e-181 639.0 536 63.2
Cfa018656 Carpinus fangiana HOM05D007982 ORTHO05D010255 2.7e-180 636.0 463 69.5
COL.COLO4_02959 Corchorus olitorius HOM05D007982 ORTHO05D010255 1.8e-176 623.2 489 63.2
Thecc.02G154200 Theobroma cacao HOM05D007982 ORTHO05D010255 8.8e-176 620.9 512 62.5
MD13G1002800 Malus domestica HOM05D007982 ORTHO05D010255 1.2e-175 620.5 472 66.5
Ciclev10031355m.g Citrus clementina HOM05D007982 ORTHO05D010255 1.6e-172 610.1 488 65.2
Nn4g25166 Nelumbo nucifera HOM05D007982 ORTHO05D010255 7.7e-172 607.8 457 66.7
Nitab4.5_0003038g0010 Nicotiana tabacum HOM05D007982 ORTHO05D010255 1.3e-171 607.1 462 64.5
Sopen04g004060 Solanum pennellii HOM05D007982 ORTHO05D010255 1.3e-171 607.1 459 64.7
Aqoxy3G04317 Aquilegia oxysepala HOM05D007982 ORTHO05D010255 2.3e-171 606.3 464 65.1
PGR142G3837 Punica granatum HOM05D007982 ORTHO05D010255 2.9e-171 605.9 456 66.2
Solyc04g008880.4 Solanum lycopersicum HOM05D007982 ORTHO05D010255 1.1e-170 604.0 459 64.3
Migut.E00677 Erythranthe guttata HOM05D007982 ORTHO05D010255 1.9e-170 603.2 457 67.0
Nitab4.5_0001379g0110 Nicotiana tabacum HOM05D007982 ORTHO05D010255 1.9e-170 603.2 459 64.5
PGSC0003DMG400025302 Solanum tuberosum HOM05D007982 ORTHO05D010255 1.6e-169 600.1 459 64.1
Peaxi162Scf00681g00437 Petunia axillaris HOM05D007982 ORTHO05D010255 2.1e-169 599.7 459 63.8
MBI06_g27478_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 3.3e-162 575.9 475 61.3
CANSAT78G2255 Cannabis sativa HOM05D007982 ORTHO05D010255 7.5e-159 564.7 441 65.1
Gohir.A12G132500 Gossypium hirsutum HOM05D007982 ORTHO05D010255 2.3e-155 553.1 485 58.8
Gohir.D12G136100 Gossypium hirsutum HOM05D007982 ORTHO05D010255 2.5e-154 549.7 474 59.5
Gorai.008G147300 Gossypium raimondii HOM05D007982 ORTHO05D010255 9.5e-154 547.7 474 59.3
Actinidia04353 Actinidia chinensis HOM05D007982 ORTHO05D010255 3.1e-144 516.2 383 72.1
Haze_17412 Corylus avellana HOM05D007982 ORTHO05D010255 1.7e-142 510.4 462 58.9
HPP92_015183 Vanilla planifolia HOM05D007982 ORTHO05D010255 2.7e-132 476.5 476 53.2
Pp3c22_18880 Physcomitrium patens HOM05D007982 ORTHO05D010255 2.6e-111 406.8 485 47.2
SMO259G0034 Selaginella moellendorffii HOM05D007982 ORTHO05D010255 1.7e-110 404.1 457 45.7
Mapoly0001s0484 Marchantia polymorpha HOM05D007982 ORTHO05D010255 7.9e-108 395.2 503 43.3
Atru.chr11.1247 Acer truncatum HOM05D007982 ORTHO05D010255 9.0e-96 355.1 293 63.5
AagrBONN_evm.TU.Sc2ySwM_362.2345 Anthoceros agrestis HOM05D007982 ORTHO05D010255 1.5e-95 354.4 392 50.3
Oeu027929.1 Olea europaea HOM05D007982 ORTHO05D010255 4.5e-95 352.8 412 48.8
Cpa.g.c40876 Carica papaya HOM05D007982 ORTHO05D010255 2.2e-89 334.0 237 70.0
MBI14_g28586_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 3.4e-66 256.9 237 58.2
Atru.chr11.1266 Acer truncatum HOM05D007982 ORTHO05D010255 8.3e-65 252.3 222 57.7
SalBow2G1914 Salvia bowleyana HOM05D007982 ORTHO05D010255 5.9e-63 246.1 194 62.9
SEGI_18232 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 5.9e-63 246.1 239 51.9
SEGI_24738 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 5.9e-63 246.1 239 51.9
FAN17G1590 Fragaria x ananassa HOM05D007982 ORTHO05D010255 2.7e-60 237.3 319 47.6
MBI17_g03293_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.2e-58 231.9 187 63.6
Cpa.g.sc138.6 Carica papaya HOM05D007982 ORTHO05D010255 3.4e-58 230.3 183 66.1
PRCOL_00006233 Prasinoderma coloniale HOM05D007982 ORTHO05D010255 3.4e-58 230.3 503 34.4
MBI19_g41559_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.6e-55 221.5 183 61.2
MBI09_g17621_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 2.7e-55 220.7 183 61.7
MBI09_g40719_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.1e-53 215.3 183 60.7
MBI05_g11582_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 8.0e-52 209.1 175 61.1
FvH4_4g37200 Fragaria vesca HOM05D007982 ORTHO05D010255 9.8e-50 202.2 264 47.0
FAN12G3848 Fragaria x ananassa HOM05D007982 ORTHO05D010255 1.1e-48 198.7 184 58.7
MBI14_g39939_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.4e-48 198.4 171 60.8
MBI04_g26113_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 2.4e-48 197.6 168 60.1
SEGI_11934 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 6.1e-44 183.0 240 44.2
Gohir.D13G112900 Gossypium hirsutum HOM05D007982 ORTHO05D010255 4.9e-41 173.3 156 55.1
MBI18_g19089_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 6.4e-41 172.9 181 51.4
MBI18_g03299_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 9.2e-40 169.1 143 58.7
MBI18_g45738_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.3e-38 165.2 143 57.3
MBI09_g45432_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 2.8e-36 157.5 121 63.6
Gohir.D03G023166 Gossypium hirsutum HOM05D007982 ORTHO05D010255 3.1e-27 127.5 115 57.4
Gorai.003G023800 Gossypium raimondii HOM05D007982 ORTHO05D010255 5.8e-26 123.2 115 54.8
Pp3s92_70 Physcomitrium patens HOM05D007982 ORTHO05D034158 3.7e-25 120.6 361 28.8
Nitab4.5_0001462g0020 Nicotiana tabacum HOM05D007982 ORTHO05D010255 4.9e-25 120.2 172 45.3
Nitab4.5_0003088g0030 Nicotiana tabacum HOM05D007982 ORTHO05D010293 1.1e-24 119.0 194 39.2
MBI06_g30604_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 8.6e-22 109.4 128 47.7
Cpa.g.sc138.10 Carica papaya HOM05D007982 ORTHO05D010255 4.7e-20 103.6 274 29.9
Gohir.D06G142033 Gossypium hirsutum HOM05D007982 ORTHO05D010255 6.2e-20 103.2 75 65.3
Nitab4.5_0001462g0030 Nicotiana tabacum HOM05D007982 ORTHO05D286115 1.4e-16 92.0 122 45.9
Nitab4.5_0000082g0440 Nicotiana tabacum HOM05D003015 ORTHO05D003733 1.9e-16 91.7 107 42.1
Nitab4.5_0001297g0080 Nicotiana tabacum HOM05D007982 ORTHO05D010255 1.2e-15 89.0 134 44.0
Cpa.g.sc138.4 Carica papaya HOM05D007982 ORTHO05D010255 1.7e-14 85.1 75 57.3
Nitab4.5_0001269g0080 Nicotiana tabacum HOM05D009415 ORTHO05D008933 1.9e-13 81.6 79 48.1
Nitab4.5_0014613g0010 Nicotiana tabacum HOM05D003277 ORTHO05D003275 1.2e-10 72.4 76 43.4
Gorai.010G165700 Gossypium raimondii HOM05D000288 ORTHO05D000173 1.5e-10 72.0 56 58.9
FAN12G3608 Fragaria x ananassa HOM05D007982 ORTHO05D010255 6.4e-09 66.6 147 36.1
PGSC0003DMG400013554 Solanum tuberosum HOM05D007982 ORTHO05D010951 2.4e-08 64.7 85 41.2
Nitab4.5_0005642g0050 Nicotiana tabacum HOM05D007982 ORTHO05D283853 7.1e-08 63.2 90 36.7
CBR_g32224 Chara braunii HOM05D005554 ORTHO05D007823 6.0e-07 60.1 371 25.3


User provided reference genes

Program Settings