Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047075 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 1.9e-101 372.5 182 100.0
CSS0003150 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 3.0e-99 365.2 182 98.4
CSS0015023 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 2.6e-42 176.0 157 62.4
CSS0042292 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 1.7e-41 173.3 157 61.8
vmacro00998 Vaccinium macrocarpon HOM05D005394 ORTHO05D006909 5.4e-40 168.3 154 58.4
Dinv07076 Davidia involucrata HOM05D005394 ORTHO05D006909 2.1e-39 166.4 155 58.1
Nn8g41245 Nelumbo nucifera HOM05D005394 ORTHO05D006909 4.6e-39 165.2 158 59.5
Thecc.04G175300 Theobroma cacao HOM05D005394 ORTHO05D006909 1.0e-38 164.1 158 58.9
CiPaw.03G191600 Carya illinoinensis HOM05D005394 ORTHO05D006909 2.3e-38 162.9 155 56.8
Ca_06271_v3 Cicer arietinum L. HOM05D005394 ORTHO05D006909 3.9e-38 162.2 151 58.9
Ciclev10030699m.g Citrus clementina HOM05D005394 ORTHO05D006909 3.9e-38 162.2 158 58.2
MBI16_g26174_MAGBIO Magnolia biondii HOM05D005394 ORTHO05D006909 5.1e-38 161.8 178 50.6
MD17G1137000 Malus domestica HOM05D005394 ORTHO05D006909 5.1e-38 161.8 158 55.7
MD09G1149900 Malus domestica HOM05D005394 ORTHO05D006909 6.6e-38 161.4 158 55.1
TAR626G0164 Trochodendron aralioides HOM05D005394 ORTHO05D006909 6.6e-38 161.4 156 57.1
GSVIVG01020852001 Vitis vinifera HOM05D005394 ORTHO05D006909 6.6e-38 161.4 156 56.4
RcHm_v2.0_Chr2g0151781 Rosa chinensis HOM05D005394 ORTHO05D006909 1.1e-37 160.6 156 57.1
Actinidia12539 Actinidia chinensis HOM05D005394 ORTHO05D006909 1.5e-37 160.2 156 56.4
Duzib212G0967 Durio zibethinus HOM05D005394 ORTHO05D006909 1.5e-37 160.2 158 58.2
PSO675G3098 Papaver somniferum HOM05D005394 ORTHO05D006909 1.5e-37 160.2 149 57.0
Haze_13523 Corylus avellana HOM05D005394 ORTHO05D006909 1.9e-37 159.8 156 57.1
FvH4_6g38530 Fragaria vesca HOM05D005394 ORTHO05D006909 2.5e-37 159.5 149 57.7
FAN02G2503 Fragaria x ananassa HOM05D005394 ORTHO05D006909 2.5e-37 159.5 149 57.7
FAN05G5751 Fragaria x ananassa HOM05D005394 ORTHO05D006909 2.5e-37 159.5 149 57.7
FAN14G2062 Fragaria x ananassa HOM05D005394 ORTHO05D006909 2.5e-37 159.5 149 57.7
Gohir.D10G126100 Gossypium hirsutum HOM05D005394 ORTHO05D006909 2.5e-37 159.5 157 56.1
Gorai.011G139100 Gossypium raimondii HOM05D005394 ORTHO05D006909 2.5e-37 159.5 157 56.1
Lalb_Chr17g0348211 Lupinus albus HOM05D005394 ORTHO05D006909 2.5e-37 159.5 150 57.3
Medtr5g091250 Medicago truncatula HOM05D005394 ORTHO05D006909 2.5e-37 159.5 151 57.0
Prupe.3G175300 Prunus persica HOM05D005394 ORTHO05D006909 3.3e-37 159.1 149 56.4
Psat0s1569g0040 Pisum sativum HOM05D005394 ORTHO05D006909 4.3e-37 158.7 151 57.6
EL10Ac9g22847 Beta vulgaris HOM05D005394 ORTHO05D006909 5.6e-37 158.3 151 57.0
Ah.01g001930 Amaranthus hybridus HOM05D005394 ORTHO05D006909 7.3e-37 157.9 151 56.3
MSTRG.15035 Avicennia marina HOM05D005394 ORTHO05D006909 7.3e-37 157.9 147 57.8
LjContig00049g0014840 Lotus japonicus HOM05D005394 ORTHO05D006909 7.3e-37 157.9 150 57.3
MBI10_g36389_MAGBIO Magnolia biondii HOM05D005394 ORTHO05D006909 9.5e-37 157.5 149 57.0
Eucgr.A02013 Eucalyptus grandis HOM05D005394 ORTHO05D006909 1.2e-36 157.1 149 56.4
PSO541G2917 Papaver somniferum HOM05D005394 ORTHO05D006909 1.6e-36 156.8 149 56.4
SGA_v2.0_scaffold4G02121 Striga asiatica HOM05D005394 ORTHO05D006909 1.6e-36 156.8 149 55.0
FAN09G4660 Fragaria x ananassa HOM05D005394 ORTHO05D006909 2.1e-36 156.4 149 57.0
Manes.02G088100 Manihot esculenta HOM05D005394 ORTHO05D006909 2.1e-36 156.4 156 56.4
Aqoxy1G01759 Aquilegia oxysepala HOM05D005394 ORTHO05D006909 2.8e-36 156.0 149 56.4
Glyma.02G286300 Glycine max HOM05D005394 ORTHO05D006909 2.8e-36 156.0 158 56.3
Glyma.14G029500 Glycine max HOM05D005394 ORTHO05D006909 2.8e-36 156.0 158 56.3
HanXRQChr16g0503181 Helianthus annuus HOM05D005394 ORTHO05D006909 2.8e-36 156.0 157 54.1
Zm00001eb286850 Zea mays HOM05D005394 ORTHO05D006909 2.8e-36 156.0 149 57.0
CDE02G3161 Ceratophyllum demersum HOM05D005394 ORTHO05D006909 3.6e-36 155.6 153 54.2
AUR62015139 Chenopodium quinoa HOM05D005394 ORTHO05D006909 3.6e-36 155.6 157 53.5
DCAR_009812 Daucus carota HOM05D005394 ORTHO05D006909 3.6e-36 155.6 150 55.3
Gohir.A10G140600 Gossypium hirsutum HOM05D005394 ORTHO05D006909 3.6e-36 155.6 156 57.1
Lj1A601G23 Lonicera japonica HOM05D005394 ORTHO05D006909 3.6e-36 155.6 151 56.3
CANSAT64G3008 Cannabis sativa HOM05D005394 ORTHO05D006909 4.7e-36 155.2 178 47.2
CAN.G2018.3 Capsicum annuum HOM05D005394 ORTHO05D006909 4.7e-36 155.2 147 56.5
Cfa023066 Carpinus fangiana HOM05D005394 ORTHO05D006909 4.7e-36 155.2 156 56.4
COL.COLO4_10088 Corchorus olitorius HOM05D005394 ORTHO05D006909 4.7e-36 155.2 156 54.5
HanXRQChr17g0559821 Helianthus annuus HOM05D005394 ORTHO05D006909 4.7e-36 155.2 157 54.1
PGSC0003DMG400021243 Solanum tuberosum HOM05D005394 ORTHO05D006909 4.7e-36 155.2 147 55.8
Lsat_1_v5_gn_8_142320 Lactuca sativa HOM05D005394 ORTHO05D006909 6.2e-36 154.8 155 52.9
Nitab4.5_0002209g0020 Nicotiana tabacum HOM05D005394 ORTHO05D006909 6.2e-36 154.8 147 56.5
VMungo0647G2040 Vigna mungo HOM05D005394 ORTHO05D006909 6.2e-36 154.8 158 55.7
HanXRQChr09g0276121 Helianthus annuus HOM05D005394 ORTHO05D006909 8.1e-36 154.5 157 53.5
Manes.01G130300 Manihot esculenta HOM05D005394 ORTHO05D006909 8.1e-36 154.5 157 55.4
Peaxi162Scf00035g02520 Petunia axillaris HOM05D005394 ORTHO05D006909 8.1e-36 154.5 150 56.0
Phvul.008G193314 Phaseolus vulgaris HOM05D005394 ORTHO05D006909 8.1e-36 154.5 158 55.7
Potri.005G203900 Populus trichocarpa HOM05D005394 ORTHO05D006909 8.1e-36 154.5 156 55.1
Sabra02G0047500 Salix brachista HOM05D005394 ORTHO05D006909 8.1e-36 154.5 152 55.9
Sc06g0007690 Simmondsia chinensis HOM05D005394 ORTHO05D006909 1.1e-35 154.1 149 55.0
Solyc10g007720.4 Solanum lycopersicum HOM05D005394 ORTHO05D006909 1.1e-35 154.1 147 55.1
Sopen10g003630 Solanum pennellii HOM05D005394 ORTHO05D006909 1.1e-35 154.1 147 55.1
QL08p044839 Quercus lobata HOM05D005394 ORTHO05D006909 1.4e-35 153.7 147 57.8
THA.LOC104825567 Tarenaya hassleriana HOM05D005394 ORTHO05D006909 1.4e-35 153.7 149 55.0
AUR62017599 Chenopodium quinoa HOM05D005394 ORTHO05D006909 1.8e-35 153.3 157 52.9
PGR042G0197 Punica granatum HOM05D005394 ORTHO05D006909 2.3e-35 152.9 153 53.6
arahy.Tifrunner.gnm1.ann1.C2BK4Q Arachis hypogaea HOM05D005394 ORTHO05D006909 3.1e-35 152.5 150 55.3
Cpa.g.sc2.203 Carica papaya HOM05D005394 ORTHO05D006909 3.1e-35 152.5 149 57.0
ClCG02G018460 Citrullus lanatus HOM05D005394 ORTHO05D006909 3.1e-35 152.5 147 55.8
Migut.E01770 Erythranthe guttata HOM05D005394 ORTHO05D006909 3.1e-35 152.5 147 55.8
Nitab4.5_0003104g0050 Nicotiana tabacum HOM05D005394 ORTHO05D006909 3.1e-35 152.5 147 55.1
CsaV3_6G013780 Cucumis sativus L. HOM05D005394 ORTHO05D006909 4.0e-35 152.1 151 54.3
Sabra05G0154700 Salix brachista HOM05D005394 ORTHO05D006909 4.0e-35 152.1 155 54.8
Oeu020932.1 Olea europaea HOM05D005394 ORTHO05D006909 5.2e-35 151.8 147 54.4
ATR0605G001 Amborella trichopoda HOM05D005394 ORTHO05D006909 6.8e-35 151.4 155 52.9
arahy.Tifrunner.gnm1.ann1.3I6JR3 Arachis hypogaea HOM05D005394 ORTHO05D006909 6.8e-35 151.4 150 54.7
TWI14G0801 Tripterygium wilfordii HOM05D005394 ORTHO05D006909 8.9e-35 151.0 150 55.3
Potri.002G058300 Populus trichocarpa HOM05D005394 ORTHO05D006909 1.2e-34 150.6 147 55.8
Cc05_g09680 Coffea canephora HOM05D005394 ORTHO05D006909 1.5e-34 150.2 147 55.1
Atru.BG.36.p Acer truncatum HOM05D005394 ORTHO05D006909 9.9e-34 147.5 149 55.0
Aa31sc829G10 Aethionema arabicum HOM05D005394 ORTHO05D006909 9.9e-34 147.5 157 49.0
MELO3C019674.2 Cucumis melo HOM05D005394 ORTHO05D006909 9.9e-34 147.5 144 56.2
Sed0020842 Sechium edule HOM05D005394 ORTHO05D006909 9.9e-34 147.5 146 54.1
Sed0013102 Sechium edule HOM05D005394 ORTHO05D006909 1.3e-33 147.1 151 52.3
Thhalv10018283m.g Eutrema salsugineum HOM05D005394 ORTHO05D006909 8.4e-33 144.4 149 49.7
unitig_46.g18287 Utricularia gibba HOM05D005394 ORTHO05D006909 8.4e-33 144.4 147 50.3
SHI02103 Sapria himalayana HOM05D005394 ORTHO05D006909 1.4e-32 143.7 173 45.1
Actinidia25071 Actinidia chinensis HOM05D005394 ORTHO05D006909 1.9e-32 143.3 129 60.5
BraA07t31074Z Brassica rapa HOM05D005394 ORTHO05D006909 1.9e-32 143.3 152 50.0
HPP92_002195 Vanilla planifolia HOM05D005394 ORTHO05D006909 1.9e-32 143.3 149 52.3
BcaB03g15148 Brassica carinata HOM05D005394 ORTHO05D006909 2.4e-32 142.9 149 50.3
BcaC08g46016 Brassica carinata HOM05D005394 ORTHO05D006909 2.4e-32 142.9 152 49.3
A07p34470 Brassica napus HOM05D005394 ORTHO05D006909 2.4e-32 142.9 152 49.3
C06p38110 Brassica napus HOM05D005394 ORTHO05D006909 2.4e-32 142.9 152 49.3
BolC6t38908H Brassica oleracea HOM05D005394 ORTHO05D006909 2.4e-32 142.9 152 49.3
CARHR060570 Cardamine hirsuta HOM05D005394 ORTHO05D006909 5.4e-32 141.7 149 49.7
CDE09G0652 Ceratophyllum demersum HOM05D005394 ORTHO05D006909 5.4e-32 141.7 153 49.7
AT1G67930 Arabidopsis thaliana HOM05D005394 ORTHO05D006909 7.1e-32 141.4 152 47.4
C06p42040 Brassica napus HOM05D005394 ORTHO05D006909 1.2e-31 140.6 149 49.7
Sp5g22930 Schrenkiella parvula HOM05D005394 ORTHO05D006909 1.6e-31 140.2 152 46.7
AL2G26730 Arabidopsis lyrata HOM05D005394 ORTHO05D006909 2.1e-31 139.8 147 49.0
BcaC08g46216 Brassica carinata HOM05D005394 ORTHO05D006909 2.1e-31 139.8 147 49.7
BolC6t39222H Brassica oleracea HOM05D005394 ORTHO05D006909 2.1e-31 139.8 147 49.7
Carub.0002s1442 Capsella rubella HOM05D005394 ORTHO05D006909 2.1e-31 139.8 152 46.7
BcaB03g15386 Brassica carinata HOM05D005394 ORTHO05D006909 1.7e-30 136.7 149 47.7
Mapoly0082s0010 Marchantia polymorpha HOM05D005394 ORTHO05D006909 1.7e-30 136.7 147 49.7
Oeu033979.1 Olea europaea HOM05D005394 ORTHO05D006909 9.6e-29 131.0 112 61.6
SEGI_12117 Sequoiadendron giganteum HOM05D005394 ORTHO05D006909 1.2e-28 130.6 155 44.5
Pp3c14_13420 Physcomitrium patens HOM05D005394 ORTHO05D006909 1.4e-27 127.1 151 43.0
CBR_g53704 Chara braunii HOM05D005394 ORTHO05D006909 1.8e-27 126.7 154 45.5
SMO266G0070 Selaginella moellendorffii HOM05D005394 ORTHO05D006909 1.8e-27 126.7 147 46.9
Pp3c10_16550 Physcomitrium patens HOM05D005394 ORTHO05D006909 8.9e-27 124.4 151 42.4
ECA233G4606 Erigeron canadensis HOM05D005394 ORTHO05D006909 4.6e-23 112.1 123 50.4
Cre17.g721900 Chlamydomonas reinhardtii HOM05D005394 ORTHO05D006909 1.1e-08 64.3 118 33.9
MCO08G047 Micromonas commoda HOM05D005394 ORTHO05D006909 7.9e-07 58.2 151 27.8


User provided reference genes

Program Settings