Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047049 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 3.1e-136 488.4 241 100.0
CSS0011907 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 1.1e-125 453.4 258 89.9
CSS0049081 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 5.2e-83 311.6 251 69.7
CSS0008768 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 1.9e-48 196.8 201 59.7
CSS0016560 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 1.9e-48 196.8 201 59.7
CSS0047750 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 1.9e-48 196.8 201 59.7
CSS0046673 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 3.2e-48 196.1 201 59.2
CSS0040737 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-40 170.2 172 58.1
CSS0046298 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004756 2.2e-33 146.7 101 76.2
CSS0005225 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.8e-30 134.8 277 35.7
vmacro05503 Vaccinium macrocarpon HOM05D002996 ORTHO05D004756 2.2e-28 130.2 107 62.6
CSS0034688 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 8.8e-22 108.2 199 37.2
PSO782G2577 Papaver somniferum HOM05D000002 ORTHO05D004756 8.8e-22 108.2 95 55.8
CSS0002158 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.5e-21 107.5 91 57.1
CSS0049897 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.0e-21 107.1 89 58.4
CSS0047175 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.6e-21 106.7 297 31.0
SHI39742 Sapria himalayana HOM05D000002 ORTHO05D000001 9.7e-21 104.8 108 51.9
CSS0020284 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-20 104.4 287 31.0
CSS0050464 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.2e-20 103.6 100 53.0
MD02G1156200 Malus domestica HOM05D000002 ORTHO05D004756 2.8e-20 103.2 100 55.0
SHI49499 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-20 103.2 108 50.9
COL.COLO4_20910 Corchorus olitorius HOM05D000002 ORTHO05D004756 3.7e-20 102.8 92 54.3
COL.COLO4_36632 Corchorus olitorius HOM05D000002 ORTHO05D004756 8.2e-20 101.7 92 54.3
CSS0043144 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004756 1.1e-19 101.3 228 33.3
CSS0037656 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.4e-19 100.9 89 55.1
SHI36897 Sapria himalayana HOM05D000002 ORTHO05D004756 2.4e-19 100.1 92 54.3
SHI03432 Sapria himalayana HOM05D007230 ORTHO05D004756 3.1e-19 99.8 108 50.0
SHI09402 Sapria himalayana HOM05D007230 ORTHO05D004756 4.1e-19 99.4 92 55.4
SHI16498 Sapria himalayana HOM05D000002 ORTHO05D000001 5.3e-19 99.0 108 50.0
COL.COLO4_28935 Corchorus olitorius HOM05D007230 ORTHO05D004756 7.0e-19 98.6 90 53.3
SHI32448 Sapria himalayana HOM05D000002 ORTHO05D000001 7.0e-19 98.6 92 54.3
SHI47374 Sapria himalayana HOM05D000002 ORTHO05D000001 7.0e-19 98.6 108 49.1
SHI05604 Sapria himalayana HOM05D000002 ORTHO05D000001 9.1e-19 98.2 106 49.1
SHI02112 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-18 97.1 92 53.3
SHI28040 Sapria himalayana HOM05D000002 ORTHO05D000001 3.5e-18 96.3 92 53.3
SHI41657 Sapria himalayana HOM05D000002 ORTHO05D004756 3.5e-18 96.3 92 53.3
SHI11549 Sapria himalayana HOM05D000002 ORTHO05D000001 4.5e-18 95.9 81 58.0
SHI18717 Sapria himalayana HOM05D007230 ORTHO05D004756 4.5e-18 95.9 92 52.2
SHI04462 Sapria himalayana HOM05D000002 ORTHO05D004756 5.9e-18 95.5 92 53.3
SHI06223 Sapria himalayana HOM05D000002 ORTHO05D000001 5.9e-18 95.5 92 52.2
SHI45992 Sapria himalayana HOM05D000002 ORTHO05D000001 5.9e-18 95.5 97 52.6
SHI17244 Sapria himalayana HOM05D007230 ORTHO05D004756 1.0e-17 94.7 92 52.2
SHI02527 Sapria himalayana HOM05D007230 ORTHO05D004756 1.7e-17 94.0 92 52.2
SHI26640 Sapria himalayana HOM05D007230 ORTHO05D004756 1.7e-17 94.0 92 53.3
Dinv13907 Davidia involucrata HOM05D004937 ORTHO05D006414 3.8e-17 92.8 91 56.0
Aqoxy5G03695 Aquilegia oxysepala HOM05D000002 ORTHO05D004756 8.5e-17 91.7 98 51.0
SHI02490 Sapria himalayana HOM05D000002 ORTHO05D000001 8.5e-17 91.7 81 56.8
TPR.G24908 Trifolium pratense HOM05D000030 ORTHO05D000031 8.5e-17 91.7 91 50.5
Ca_20123_v3 Cicer arietinum L. HOM05D007230 ORTHO05D004756 4.2e-16 89.4 104 44.2
CSS0040816 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.2e-16 88.6 84 50.0
SHI15740 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-15 87.8 89 52.8
PSO675G6160 Papaver somniferum HOM05D000002 ORTHO05D004756 3.6e-15 86.3 244 30.7
PSO144G0017 Papaver somniferum HOM05D007230 ORTHO05D004756 4.7e-15 85.9 86 48.8
PSO675G0495 Papaver somniferum HOM05D007230 ORTHO05D004756 6.1e-15 85.5 102 48.0
SHI29623 Sapria himalayana HOM05D000002 ORTHO05D000001 6.1e-15 85.5 79 54.4
SHI31302 Sapria himalayana HOM05D000002 ORTHO05D000001 6.1e-15 85.5 89 51.7
CSS0024569 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.0e-14 84.7 107 40.2
CSS0047076 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004756 1.0e-14 84.7 218 32.1
SHI09801 Sapria himalayana HOM05D007230 ORTHO05D004756 1.8e-14 84.0 234 32.9
CSS0016168 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.3e-14 83.6 107 39.3
CSS0042753 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.3e-14 83.6 107 39.3
CSS0043112 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.3e-14 83.6 107 39.3
PSO017G2245 Papaver somniferum HOM05D000002 ORTHO05D000001 2.3e-14 83.6 84 47.6
SHI12633 Sapria himalayana HOM05D000002 ORTHO05D004756 4.0e-14 82.8 73 57.5
SHI45862 Sapria himalayana HOM05D007230 ORTHO05D004756 4.0e-14 82.8 73 57.5
SHI03218 Sapria himalayana HOM05D007230 ORTHO05D004756 8.8e-14 81.6 73 57.5
Rhsim11G0119100 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.0e-13 80.5 95 42.1
SHI11692 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-13 80.5 73 56.2
SHI20212 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-13 80.5 73 57.5
SHI24644 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-13 80.5 73 56.2
SHI36442 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-13 80.5 89 50.6
SHI54737 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-13 80.5 73 56.2
Ca_07474_v3 Cicer arietinum L. HOM05D007230 ORTHO05D004756 2.6e-13 80.1 87 46.0
Hma1.2p1_1655F.1_g295950 Hydrangea macrophylla HOM05D007230 ORTHO05D004756 2.6e-13 80.1 116 38.8
SHI35844 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-13 79.7 73 56.2
TWI73G0803 Tripterygium wilfordii HOM05D007230 ORTHO05D004756 3.3e-13 79.7 157 32.5
PSO063G0989 Papaver somniferum HOM05D007230 ORTHO05D004756 5.7e-13 79.0 84 44.0
Potri.013G133550 Populus trichocarpa HOM05D010459 ORTHO05D004756 5.7e-13 79.0 96 47.9
SHI11999 Sapria himalayana HOM05D000002 ORTHO05D000001 5.7e-13 79.0 89 48.3
SHI30744 Sapria himalayana HOM05D000002 ORTHO05D004756 1.7e-12 77.4 78 52.6
Rhsim07G0087400 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.2e-12 77.0 89 42.7
PSO339G5468 Papaver somniferum HOM05D007230 ORTHO05D004756 2.8e-12 76.6 106 42.5
Haze_06812 Corylus avellana HOM05D004937 ORTHO05D006414 4.8e-12 75.9 100 44.0
Rhsim01G0194900 Rhododendron simsii HOM05D007230 ORTHO05D004756 4.8e-12 75.9 82 45.1
vmacro04005 Vaccinium macrocarpon HOM05D006655 ORTHO05D007986 6.3e-12 75.5 118 40.7
Ca_27664_v3 Cicer arietinum L. HOM05D000002 ORTHO05D004756 8.2e-12 75.1 81 46.9
Rhsim11G0068500 Rhododendron simsii HOM05D007230 ORTHO05D004756 8.2e-12 75.1 97 40.2
QL02p084387 Quercus lobata HOM05D000002 ORTHO05D000001 1.1e-11 74.7 99 34.3
QL01p026368 Quercus lobata HOM05D000002 ORTHO05D000001 1.4e-11 74.3 99 34.3
QL04p089373 Quercus lobata HOM05D000002 ORTHO05D000001 1.4e-11 74.3 99 34.3
QL06p036226 Quercus lobata HOM05D000002 ORTHO05D000001 1.4e-11 74.3 99 34.3
QL11p048818 Quercus lobata HOM05D000002 ORTHO05D000001 7.0e-11 72.0 99 33.3
QL11p002299 Quercus lobata HOM05D000002 ORTHO05D000001 9.1e-11 71.6 99 33.3
QL05p073015 Quercus lobata HOM05D000002 ORTHO05D000001 1.2e-10 71.2 99 33.3
PSO170G3518 Papaver somniferum HOM05D007230 ORTHO05D004756 1.6e-10 70.9 88 44.3
Rhsim11G0089400 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.6e-10 70.9 82 43.9
Manes.14G134321 Manihot esculenta HOM05D007230 ORTHO05D004756 5.9e-10 68.9 82 41.5
SHI50483 Sapria himalayana HOM05D000002 ORTHO05D000001 5.9e-10 68.9 66 53.0
TPR.G39545 Trifolium pratense HOM05D007230 ORTHO05D004756 5.9e-10 68.9 75 48.0
Rhsim04G0107400 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.3e-09 67.8 97 38.1
TPR.G13973 Trifolium pratense HOM05D007230 ORTHO05D004756 1.3e-09 67.8 63 52.4
CSS0018470 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004756 1.7e-09 67.4 81 46.9
CSS0048984 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-09 67.4 144 37.5
Rhsim04G0054200 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.7e-09 67.4 97 37.1
QL03p000720 Quercus lobata HOM05D000002 ORTHO05D000001 2.9e-09 66.6 89 33.7
TWI12G0087 Tripterygium wilfordii HOM05D012930 ORTHO05D004756 3.8e-09 66.2 95 33.7
TWI12G0354 Tripterygium wilfordii HOM05D012930 ORTHO05D004756 3.8e-09 66.2 95 33.7
TWI12G0323 Tripterygium wilfordii HOM05D012930 ORTHO05D004756 5.0e-09 65.9 95 33.7
TWI14G0706 Tripterygium wilfordii HOM05D012930 ORTHO05D004756 5.0e-09 65.9 95 33.7
TWI38G1548 Tripterygium wilfordii HOM05D012930 ORTHO05D004756 5.0e-09 65.9 95 33.7
TWI73G1000 Tripterygium wilfordii HOM05D012930 ORTHO05D004756 5.0e-09 65.9 95 33.7
TWI75G1724 Tripterygium wilfordii HOM05D012930 ORTHO05D004756 5.0e-09 65.9 95 33.7
Ca_02897_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 6.5e-09 65.5 64 53.1
Actinidia05629 Actinidia chinensis HOM05D007230 ORTHO05D004756 8.5e-09 65.1 52 63.5
QL05p072858 Quercus lobata HOM05D004937 ORTHO05D006414 8.5e-09 65.1 78 46.2
TWI77G0375 Tripterygium wilfordii HOM05D012930 ORTHO05D004756 1.1e-08 64.7 95 33.7
SHI40782 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-08 64.3 63 52.4
SHI31374 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-08 63.2 52 61.5
SHI53716 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-08 63.2 52 61.5
TWI73G0658 Tripterygium wilfordii HOM05D012930 ORTHO05D004756 4.2e-08 62.8 113 31.9
CSS0050399 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004756 5.5e-08 62.4 69 47.8
QL04p097278 Quercus lobata HOM05D000002 ORTHO05D000001 5.5e-08 62.4 100 33.0
QL08p048522 Quercus lobata HOM05D000002 ORTHO05D000001 5.5e-08 62.4 133 30.1
QL10p052423 Quercus lobata HOM05D000002 ORTHO05D000001 5.5e-08 62.4 100 33.0
QL11p016059 Quercus lobata HOM05D000002 ORTHO05D000001 5.5e-08 62.4 100 33.0
TWI59G1424 Tripterygium wilfordii HOM05D012930 ORTHO05D004756 7.2e-08 62.0 91 33.0
Hma1.2p1_0827F.1_g225000 Hydrangea macrophylla HOM05D007230 ORTHO05D004756 1.2e-07 61.2 63 47.6
QL05p072840 Quercus lobata HOM05D004937 ORTHO05D006414 1.2e-07 61.2 73 46.6
QL07p048797 Quercus lobata HOM05D000002 ORTHO05D000001 1.6e-07 60.8 101 29.7
QL09p018296 Quercus lobata HOM05D000002 ORTHO05D000001 1.6e-07 60.8 100 32.0
TWI59G1050 Tripterygium wilfordii HOM05D012930 ORTHO05D004756 1.6e-07 60.8 91 31.9
PSO754G0013 Papaver somniferum HOM05D007230 ORTHO05D004756 4.7e-07 59.3 54 55.6
QL02p069342 Quercus lobata HOM05D000002 ORTHO05D000001 4.7e-07 59.3 100 32.0
Psat1g216160 Pisum sativum HOM05D010459 ORTHO05D004756 1.4e-06 57.8 63 46.0
vmacro14292 Vaccinium macrocarpon HOM05D000402 ORTHO05D000263 4.0e-06 56.2 77 46.8
QL04p092122 Quercus lobata HOM05D000002 ORTHO05D000001 5.2e-06 55.8 82 34.1
Atru.chr3.2571 Acer truncatum HOM05D000002 ORTHO05D004756 6.8e-06 55.5 111 36.0
PSO675G4469 Papaver somniferum HOM05D000002 ORTHO05D000001 6.8e-06 55.5 82 39.0
PSO832G0254 Papaver somniferum HOM05D007230 ORTHO05D004756 6.8e-06 55.5 49 55.1
PGR083G0605 Punica granatum HOM05D000002 ORTHO05D000047 8.8e-06 55.1 94 35.1
Sopen05g015630 Solanum pennellii HOM05D000002 ORTHO05D000001 8.8e-06 55.1 126 27.8


User provided reference genes

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