Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047035 Camellia sinensis var. sinensis HOM05D007179 ORTHO05D009124 2.9e-83 312.0 175 100.0
Rhsim01G0010000 Rhododendron simsii HOM05D007179 ORTHO05D009124 2.1e-49 199.5 152 72.4
Dinv41297 Davidia involucrata HOM05D007179 ORTHO05D009124 5.2e-48 194.9 151 70.2
Oeu058831.1 Olea europaea HOM05D007179 ORTHO05D009124 8.6e-43 177.6 153 65.4
SalBow1G0390 Salvia bowleyana HOM05D007179 ORTHO05D009124 4.7e-41 171.8 152 61.8
CiPaw.07G187200 Carya illinoinensis HOM05D007179 ORTHO05D009124 8.0e-41 171.0 150 64.0
Potri.006G175600 Populus trichocarpa HOM05D007179 ORTHO05D009124 8.0e-41 171.0 118 74.6
Sabra06G0134300 Salix brachista HOM05D007179 ORTHO05D009124 1.5e-39 166.8 118 72.9
CiPaw.08G039500 Carya illinoinensis HOM05D007179 ORTHO05D009124 3.4e-39 165.6 150 61.3
MSTRG.26242 Avicennia marina HOM05D007179 ORTHO05D009124 2.9e-38 162.5 149 61.1
CANSAT11G0330 Cannabis sativa HOM05D007179 ORTHO05D009124 4.9e-38 161.8 151 63.6
Gohir.A05G006600 Gossypium hirsutum HOM05D007179 ORTHO05D009124 1.1e-37 160.6 146 63.0
Gohir.D05G007500 Gossypium hirsutum HOM05D007179 ORTHO05D009124 1.4e-37 160.2 146 63.0
TAR626G0641 Trochodendron aralioides HOM05D007179 ORTHO05D009124 1.4e-37 160.2 151 62.3
Migut.K00269 Erythranthe guttata HOM05D007179 ORTHO05D009124 1.8e-37 159.8 155 59.4
Gorai.009G007600 Gossypium raimondii HOM05D007179 ORTHO05D009124 1.8e-37 159.8 146 63.0
GSVIVG01032307001 Vitis vinifera HOM05D007179 ORTHO05D009124 1.8e-37 159.8 129 69.8
ECA236G0374 Erigeron canadensis HOM05D007179 ORTHO05D009124 9.2e-37 157.5 122 67.2
TWI63G0613 Tripterygium wilfordii HOM05D007179 ORTHO05D009124 9.2e-37 157.5 152 59.9
Nn1g04316 Nelumbo nucifera HOM05D007179 ORTHO05D009124 1.6e-36 156.8 117 70.1
Cc06_g13840 Coffea canephora HOM05D007179 ORTHO05D009124 2.0e-36 156.4 125 69.6
Manes.06G029800 Manihot esculenta HOM05D007179 ORTHO05D009124 2.0e-36 156.4 118 67.8
Cpa.g.c29666.1 Carica papaya HOM05D007179 ORTHO05D009124 2.7e-36 156.0 123 65.0
arahy.Tifrunner.gnm1.ann1.7FN6WP Arachis hypogaea HOM05D007179 ORTHO05D009124 5.9e-36 154.8 118 68.6
arahy.Tifrunner.gnm1.ann1.8TJD28 Arachis hypogaea HOM05D007179 ORTHO05D009124 5.9e-36 154.8 118 67.8
Sed0008122 Sechium edule HOM05D007179 ORTHO05D009124 1.3e-35 153.7 116 69.8
Medtr4g129320 Medicago truncatula HOM05D007179 ORTHO05D009124 5.0e-35 151.8 153 58.8
Prupe.1G095600 Prunus persica HOM05D007179 ORTHO05D009124 2.5e-34 149.4 150 56.7
Solyc07g006490.3 Solanum lycopersicum HOM05D007179 ORTHO05D009124 2.5e-34 149.4 152 58.6
RcHm_v2.0_Chr4g0404651 Rosa chinensis HOM05D007179 ORTHO05D009124 4.3e-34 148.7 149 57.0
Psat0s236g0160 Pisum sativum HOM05D007179 ORTHO05D009124 7.3e-34 147.9 119 63.9
Sopen07g002570 Solanum pennellii HOM05D007179 ORTHO05D009124 7.3e-34 147.9 152 58.6
Thecc.09G162500 Theobroma cacao HOM05D007179 ORTHO05D009124 7.3e-34 147.9 121 66.1
PGSC0003DMG400027448 Solanum tuberosum HOM05D007179 ORTHO05D009124 2.1e-33 146.4 152 57.9
AL7G24590 Arabidopsis lyrata HOM05D007179 ORTHO05D009124 6.2e-33 144.8 122 66.4
FvH4_4g08570 Fragaria vesca HOM05D007179 ORTHO05D009124 6.2e-33 144.8 149 55.7
MD16G1263600 Malus domestica HOM05D007179 ORTHO05D009124 6.2e-33 144.8 148 57.4
Atru.chr7.533 Acer truncatum HOM05D007179 ORTHO05D009124 8.0e-33 144.4 123 63.4
Actinidia24032 Actinidia chinensis HOM05D007179 ORTHO05D009124 1.0e-32 144.1 149 59.7
Peaxi162Scf00457g00318 Petunia axillaris HOM05D007179 ORTHO05D009124 1.8e-32 143.3 152 57.9
Carub.0007s1277 Capsella rubella HOM05D007179 ORTHO05D009124 3.1e-32 142.5 122 65.6
Lalb_Chr13g0300481 Lupinus albus HOM05D007179 ORTHO05D009124 6.8e-32 141.4 124 62.1
AT4G28025 Arabidopsis thaliana HOM05D007179 ORTHO05D009124 8.9e-32 141.0 122 64.8
BolC1t02394H Brassica oleracea HOM05D007179 ORTHO05D009124 8.9e-32 141.0 114 67.5
HanXRQChr05g0136491 Helianthus annuus HOM05D007179 ORTHO05D009124 8.9e-32 141.0 152 57.2
PGR102G1777 Punica granatum HOM05D007179 ORTHO05D009124 8.9e-32 141.0 113 69.0
THA.LOC104811817 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 8.9e-32 141.0 151 56.3
Thhalv10026434m.g Eutrema salsugineum HOM05D007179 ORTHO05D009124 1.2e-31 140.6 114 64.9
Aa31LG3G160 Aethionema arabicum HOM05D007179 ORTHO05D009124 1.5e-31 140.2 111 68.5
Lsat_1_v5_gn_8_65641 Lactuca sativa HOM05D007179 ORTHO05D009124 2.6e-31 139.4 152 55.3
Nitab4.5_0011540g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 2.6e-31 139.4 119 69.7
Sp7g25970 Schrenkiella parvula HOM05D007179 ORTHO05D009124 2.6e-31 139.4 152 55.9
BcaNung01603 Brassica carinata HOM05D007179 ORTHO05D009124 3.4e-31 139.0 114 67.5
VMungo1215G3157 Vigna mungo HOM05D007179 ORTHO05D009124 3.4e-31 139.0 120 64.2
Ciclev10009752m.g Citrus clementina HOM05D007179 ORTHO05D009124 4.4e-31 138.7 142 56.3
BraA03t14832Z Brassica rapa HOM05D007179 ORTHO05D009124 7.5e-31 137.9 158 55.1
Glyma.17G067900 Glycine max HOM05D007179 ORTHO05D009124 7.5e-31 137.9 120 61.7
Lj4g0019685 Lotus japonicus HOM05D007179 ORTHO05D009124 7.5e-31 137.9 127 58.3
THA.LOC104817810 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 7.5e-31 137.9 120 62.5
C01p24450 Brassica napus HOM05D007179 ORTHO05D009124 1.3e-30 137.1 162 54.9
A03p57660 Brassica napus HOM05D007179 ORTHO05D009124 2.9e-30 136.0 158 54.4
MELO3C004033.2 Cucumis melo HOM05D007179 ORTHO05D009124 2.9e-30 136.0 153 56.9
BcaC06g32651 Brassica carinata HOM05D007179 ORTHO05D009124 3.7e-30 135.6 123 61.0
vmacro13080 Vaccinium macrocarpon HOM05D007179 ORTHO05D009124 4.9e-30 135.2 87 83.9
Sc14g0001110 Simmondsia chinensis HOM05D007179 ORTHO05D009124 6.4e-30 134.8 107 65.4
Phvul.003G150500 Phaseolus vulgaris HOM05D007179 ORTHO05D009124 1.1e-29 134.0 115 64.3
ClCG11G012230 Citrullus lanatus HOM05D007179 ORTHO05D009124 1.4e-29 133.7 115 63.5
DCAR_017946 Daucus carota HOM05D007179 ORTHO05D009124 1.9e-29 133.3 137 56.2
A01p19410 Brassica napus HOM05D007179 ORTHO05D009124 2.4e-29 132.9 162 53.7
C07p55870 Brassica napus HOM05D007179 ORTHO05D009124 2.4e-29 132.9 157 52.2
BraA01t01881Z Brassica rapa HOM05D007179 ORTHO05D009124 2.4e-29 132.9 162 53.7
Eucgr.C02437 Eucalyptus grandis HOM05D007179 ORTHO05D009124 2.4e-29 132.9 100 70.0
Aqoxy7G03201 Aquilegia oxysepala HOM05D007179 ORTHO05D009124 7.0e-29 131.3 152 50.7
BolC7t46066H Brassica oleracea HOM05D007179 ORTHO05D009124 9.2e-29 131.0 164 51.2
CARHR235720 Cardamine hirsuta HOM05D007179 ORTHO05D009124 1.6e-28 130.2 114 62.3
COL.COLO4_16058 Corchorus olitorius HOM05D007179 ORTHO05D009124 1.6e-28 130.2 141 60.3
Lj9A729T43 Lonicera japonica HOM05D007179 ORTHO05D009124 1.6e-28 130.2 143 54.5
AUR62040282 Chenopodium quinoa HOM05D007179 ORTHO05D009124 6.0e-28 128.3 118 60.2
Hund08993 Selenicereus undatus HOM05D007179 ORTHO05D009124 6.0e-28 128.3 124 58.1
MBI15_g26085_MAGBIO Magnolia biondii HOM05D007179 ORTHO05D009124 1.0e-27 127.5 98 68.4
AUR62039974 Chenopodium quinoa HOM05D007179 ORTHO05D009124 3.9e-27 125.6 132 56.1
CsaV3_2G008330 Cucumis sativus L. HOM05D007179 ORTHO05D009124 5.0e-27 125.2 146 55.5
Duzib150G1658 Durio zibethinus HOM05D007179 ORTHO05D009124 5.0e-27 125.2 95 70.5
CAN.G584.44 Capsicum annuum HOM05D007179 ORTHO05D009124 6.6e-27 124.8 103 68.9
PSO063G6628 Papaver somniferum HOM05D007179 ORTHO05D009124 6.6e-27 124.8 150 50.0
PSO782G3484 Papaver somniferum HOM05D007179 ORTHO05D009124 9.5e-26 120.9 151 49.0
unitig_37.g12688 Utricularia gibba HOM05D007179 ORTHO05D009124 3.1e-24 115.9 109 58.7
Hund26395 Selenicereus undatus HOM05D007179 ORTHO05D009124 4.0e-24 115.5 106 58.5
FAN22G0121 Fragaria x ananassa HOM05D007179 ORTHO05D009124 8.9e-24 114.4 83 74.7
Nitab4.5_0002004g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 1.3e-22 110.5 74 81.1
CDE05G2983 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 1.7e-22 110.2 108 54.6
ATR0580G253 Amborella trichopoda HOM05D007179 ORTHO05D009124 2.2e-22 109.8 114 54.4
EL10Ac8g18859 Beta vulgaris HOM05D007179 ORTHO05D009124 2.2e-22 109.8 78 71.8
CDE02G2992 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 2.9e-22 109.4 93 61.3
FAN17G2417 Fragaria x ananassa HOM05D007179 ORTHO05D009124 4.9e-22 108.6 72 79.2
HPP92_018535 Vanilla planifolia HOM05D007179 ORTHO05D009124 6.4e-22 108.2 74 73.0
Actinidia24777 Actinidia chinensis HOM05D007179 ORTHO05D009124 8.3e-22 107.8 142 50.0
Ca_21187_v3 Cicer arietinum L. HOM05D000001 ORTHO05D009942 6.6e-19 98.2 72 69.4
Zm00001eb246810 Zea mays HOM05D007179 ORTHO05D009124 1.6e-17 93.6 139 43.9
SGA_v2.0_scaffold325G48698 Striga asiatica HOM05D007179 ORTHO05D009124 2.8e-17 92.8 68 72.1
SMO358G0032 Selaginella moellendorffii HOM05D007179 ORTHO05D009124 1.8e-16 90.1 79 59.5
Mapoly0124s0027 Marchantia polymorpha HOM05D007179 ORTHO05D009124 5.2e-16 88.6 164 39.0
Medtr4g129300 Medicago truncatula HOM05D007179 ORTHO05D009124 1.5e-15 87.0 62 71.0
Haze_22156 Corylus avellana HOM05D007179 ORTHO05D009124 2.0e-15 86.7 105 54.3
Haze_22155 Corylus avellana HOM05D007179 ORTHO05D009124 7.6e-15 84.7 49 81.6
Dinv42771 Davidia involucrata HOM05D007179 ORTHO05D009124 1.3e-14 84.0 104 50.0
AagrBONN_evm.TU.Sc2ySwM_362.2423 Anthoceros agrestis HOM05D007179 ORTHO05D009124 1.7e-14 83.6 121 38.0
BcaC09g50519 Brassica carinata HOM05D000147 ORTHO05D013131 4.9e-14 82.0 57 68.4
Pp3c12_25950 Physcomitrium patens HOM05D007179 ORTHO05D009124 2.4e-13 79.7 87 44.8
Dinv43332 Davidia involucrata HOM05D007179 ORTHO05D009124 1.5e-07 60.5 66 51.5
BcaC09g50518 Brassica carinata HOM05D005733 ORTHO05D007442 8.4e-06 54.7 63 60.3


User provided reference genes

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