Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047032 Camellia sinensis var. sinensis HOM05D006526 ORTHO05D008496 1.7e-42 175.6 89 100.0
CSS0022358 Camellia sinensis var. sinensis HOM05D006526 ORTHO05D008496 1.2e-37 159.5 89 89.9
Dinv33336 Davidia involucrata HOM05D006526 ORTHO05D008496 6.3e-18 94.0 77 62.3
Actinidia05903 Actinidia chinensis HOM05D006526 ORTHO05D008496 9.1e-17 90.1 55 74.5
Rhsim10G0006300 Rhododendron simsii HOM05D006526 ORTHO05D008496 4.5e-16 87.8 48 83.3
vmacro05958 Vaccinium macrocarpon HOM05D006526 ORTHO05D008496 5.9e-16 87.4 75 57.3
Actinidia36203 Actinidia chinensis HOM05D006526 ORTHO05D008496 2.3e-15 85.5 68 63.2
Hma1.2p1_1278F.1_g272280 Hydrangea macrophylla HOM05D006526 ORTHO05D008496 2.9e-15 85.1 78 57.7
Peaxi162Scf00420g00560 Petunia axillaris HOM05D006526 ORTHO05D008496 6.6e-15 84.0 52 76.9
Solyc02g094150.4 Solanum lycopersicum HOM05D006526 ORTHO05D008496 6.6e-15 84.0 74 60.8
Sopen02g038780 Solanum pennellii HOM05D006526 ORTHO05D008496 6.6e-15 84.0 74 60.8
Cc07_g00840 Coffea canephora HOM05D006526 ORTHO05D008496 8.6e-15 83.6 79 54.4
PGSC0003DMG400020254 Solanum tuberosum HOM05D006526 ORTHO05D008496 8.6e-15 83.6 74 59.5
GSVIVG01033093001 Vitis vinifera HOM05D006526 ORTHO05D008496 2.5e-14 82.0 75 54.7
CAN.G473.100 Capsicum annuum HOM05D006526 ORTHO05D008496 3.3e-14 81.6 74 58.1
Oeu005097.1 Olea europaea HOM05D006526 ORTHO05D008496 9.5e-14 80.1 75 50.7
TWI56G1218 Tripterygium wilfordii HOM05D006526 ORTHO05D008496 1.2e-13 79.7 75 52.0
COL.COLO4_13261 Corchorus olitorius HOM05D006526 ORTHO05D008496 1.6e-13 79.3 74 54.1
Eucgr.J02351 Eucalyptus grandis HOM05D006526 ORTHO05D008496 1.6e-13 79.3 55 65.5
Hund04346 Selenicereus undatus HOM05D006526 ORTHO05D008496 2.1e-13 79.0 80 48.8
Lju41C52G13 Lonicera japonica HOM05D002875 ORTHO05D003215 2.8e-13 78.6 55 67.3
Potri.001G330100 Populus trichocarpa HOM05D006526 ORTHO05D008496 2.8e-13 78.6 77 53.2
Nn4g22325 Nelumbo nucifera HOM05D006526 ORTHO05D008496 3.6e-13 78.2 57 64.9
Manes.15G161000 Manihot esculenta HOM05D006526 ORTHO05D008496 4.7e-13 77.8 74 55.4
SalBow7G1947 Salvia bowleyana HOM05D006526 ORTHO05D008496 1.0e-12 76.6 72 54.2
DCAR_000965 Daucus carota HOM05D006526 ORTHO05D008496 1.4e-12 76.3 73 53.4
Nitab4.5_0002050g0140 Nicotiana tabacum HOM05D006526 ORTHO05D008496 1.4e-12 76.3 45 75.6
Duzib147G1379 Durio zibethinus HOM05D006526 ORTHO05D008496 1.8e-12 75.9 74 51.4
Sabra16G0211400 Salix brachista HOM05D006526 ORTHO05D008496 1.8e-12 75.9 77 51.9
SGA_v2.0_scaffold47G17596 Striga asiatica HOM05D006526 ORTHO05D008496 1.8e-12 75.9 75 52.0
Thecc.04G036000 Theobroma cacao HOM05D006526 ORTHO05D008496 1.8e-12 75.9 74 51.4
AUR62003516 Chenopodium quinoa HOM05D006526 ORTHO05D008496 2.3e-12 75.5 65 53.8
Migut.K01466 Erythranthe guttata HOM05D006526 ORTHO05D008496 2.3e-12 75.5 69 53.6
PGR042G1209 Punica granatum HOM05D006526 ORTHO05D008496 2.3e-12 75.5 76 47.4
AUR62017828 Chenopodium quinoa HOM05D006526 ORTHO05D008496 4.0e-12 74.7 65 52.3
CARHR075020 Cardamine hirsuta HOM05D006526 ORTHO05D008496 6.8e-12 73.9 71 49.3
AT3G01920 Arabidopsis thaliana HOM05D006526 ORTHO05D008496 8.9e-12 73.6 71 47.9
Os08g0531300 Oryza sativa ssp. japonica HOM05D006526 ORTHO05D008496 1.2e-11 73.2 68 52.9
BcaB05g22967 Brassica carinata HOM05D006526 ORTHO05D008496 1.5e-11 72.8 53 60.4
QL02p071425 Quercus lobata HOM05D006526 ORTHO05D008496 1.5e-11 72.8 67 58.2
Gohir.D09G036900 Gossypium hirsutum HOM05D006526 ORTHO05D008496 2.0e-11 72.4 74 50.0
Gorai.006G042000 Gossypium raimondii HOM05D006526 ORTHO05D008496 2.0e-11 72.4 74 50.0
arahy.Tifrunner.gnm1.ann1.4N5YWB Arachis hypogaea HOM05D006526 ORTHO05D008496 2.6e-11 72.0 75 49.3
arahy.Tifrunner.gnm1.ann1.C96CVE Arachis hypogaea HOM05D006526 ORTHO05D008496 2.6e-11 72.0 75 49.3
Gohir.A09G035700 Gossypium hirsutum HOM05D006526 ORTHO05D008496 2.6e-11 72.0 74 48.6
Lsat_1_v5_gn_2_93080 Lactuca sativa HOM05D006526 ORTHO05D008496 2.6e-11 72.0 56 62.5
PSO017G5829 Papaver somniferum HOM05D006526 ORTHO05D008496 2.6e-11 72.0 49 65.3
Aqoxy3G01551 Aquilegia oxysepala HOM05D006526 ORTHO05D008496 3.4e-11 71.6 48 70.8
Ciclev10015967m.g Citrus clementina HOM05D006526 ORTHO05D008496 3.4e-11 71.6 72 51.4
BcaB05g22970 Brassica carinata HOM05D006526 ORTHO05D008496 4.4e-11 71.2 72 47.2
CDE05G3548 Ceratophyllum demersum HOM05D006526 ORTHO05D008496 5.7e-11 70.9 67 53.7
Aa31LG5G11040 Aethionema arabicum HOM05D006526 ORTHO05D008496 7.5e-11 70.5 71 46.5
Ah.03g147500 Amaranthus hybridus HOM05D006526 ORTHO05D008496 7.5e-11 70.5 65 50.8
ATR0561G126 Amborella trichopoda HOM05D006526 ORTHO05D008496 7.5e-11 70.5 67 50.7
Cpa.g.sc171.15 Carica papaya HOM05D006526 ORTHO05D008496 7.5e-11 70.5 75 42.7
PSO478G2106 Papaver somniferum HOM05D006526 ORTHO05D008496 7.5e-11 70.5 67 50.7
CsaV3_3G027000 Cucumis sativus L. HOM05D006526 ORTHO05D008496 1.3e-10 69.7 75 49.3
RcHm_v2.0_Chr2g0175561 Rosa chinensis HOM05D006526 ORTHO05D008496 1.3e-10 69.7 53 64.2
THA.LOC104821121 Tarenaya hassleriana HOM05D006526 ORTHO05D008496 1.3e-10 69.7 71 49.3
unitig_88.g27695 Utricularia gibba HOM05D006526 ORTHO05D008496 1.3e-10 69.7 45 68.9
Atru.chr6.2570 Acer truncatum HOM05D006526 ORTHO05D008496 1.7e-10 69.3 68 51.5
AL3G10210 Arabidopsis lyrata HOM05D006526 ORTHO05D008496 1.7e-10 69.3 64 51.6
MSTRG.3258 Avicennia marina HOM05D006526 ORTHO05D008496 2.2e-10 68.9 47 66.0
BcaC09g49919 Brassica carinata HOM05D006526 ORTHO05D008496 2.2e-10 68.9 53 54.7
A01p25030 Brassica napus HOM05D006526 ORTHO05D008496 2.2e-10 68.9 53 54.7
C01p31260 Brassica napus HOM05D006526 ORTHO05D008496 2.2e-10 68.9 53 54.7
BolC1t03065H Brassica oleracea HOM05D006526 ORTHO05D008496 2.2e-10 68.9 53 54.7
BraA01t02414Z Brassica rapa HOM05D006526 ORTHO05D008496 2.2e-10 68.9 53 54.7
CANSAT64G1234 Cannabis sativa HOM05D006526 ORTHO05D008496 2.2e-10 68.9 75 49.3
MELO3C014888.2 Cucumis melo HOM05D006526 ORTHO05D008496 2.2e-10 68.9 75 49.3
TPR.G14866 Trifolium pratense HOM05D006526 ORTHO05D008496 2.2e-10 68.9 81 46.9
CDE05G2481 Ceratophyllum demersum HOM05D006526 ORTHO05D008496 2.8e-10 68.6 70 48.6
Sp3g00170 Schrenkiella parvula HOM05D006526 ORTHO05D008496 2.8e-10 68.6 67 47.8
Lalb_Chr14g0363401 Lupinus albus HOM05D006526 ORTHO05D008496 3.7e-10 68.2 73 49.3
CiPaw.03G055600 Carya illinoinensis HOM05D006526 ORTHO05D008496 6.3e-10 67.4 72 51.4
ClCG05G013530 Citrullus lanatus HOM05D006526 ORTHO05D008496 6.3e-10 67.4 72 50.0
Prupe.3G306300 Prunus persica HOM05D006526 ORTHO05D008496 6.3e-10 67.4 63 57.1
ECA238G1207 Erigeron canadensis HOM05D006526 ORTHO05D008496 8.3e-10 67.0 54 64.8
Thhalv10000573m.g Eutrema salsugineum HOM05D006526 ORTHO05D008496 8.3e-10 67.0 66 51.5
Haze_14876 Corylus avellana HOM05D006526 ORTHO05D008496 1.1e-09 66.6 72 50.0
FAN09G0514 Fragaria x ananassa HOM05D002875 ORTHO05D003215 1.1e-09 66.6 58 60.3
Sed0022734 Sechium edule HOM05D006526 ORTHO05D008496 1.1e-09 66.6 71 47.9
FvH4_6g53521 Fragaria vesca HOM05D006526 ORTHO05D008496 1.4e-09 66.2 54 63.0
MD09G1010800 Malus domestica HOM05D006526 ORTHO05D008496 3.1e-09 65.1 67 52.2
Psat3g163920 Pisum sativum HOM05D006526 ORTHO05D008496 4.1e-09 64.7 53 56.6
Carub.0003s0016 Capsella rubella HOM05D006526 ORTHO05D008496 7.0e-09 63.9 62 48.4
HanXRQChr14g0450751 Helianthus annuus HOM05D006526 ORTHO05D008496 7.0e-09 63.9 54 61.1
Glyma.19G091200 Glycine max HOM05D006526 ORTHO05D008496 9.2e-09 63.5 53 56.6
Cfa007227 Carpinus fangiana HOM05D006526 ORTHO05D008496 1.2e-08 63.2 53 60.4
Zm00001eb175140 Zea mays HOM05D006526 ORTHO05D008496 1.6e-08 62.8 48 58.3
Lj1g0010270 Lotus japonicus HOM05D006526 ORTHO05D008496 2.7e-08 62.0 72 47.2
Phvul.001G093500 Phaseolus vulgaris HOM05D006526 ORTHO05D008496 4.5e-08 61.2 53 52.8
SMO137G0097 Selaginella moellendorffii HOM05D006526 ORTHO05D008496 1.7e-07 59.3 48 52.1
Glyma.16G056450 Glycine max HOM05D006526 ORTHO05D008496 2.9e-07 58.5 56 53.6
AagrBONN_evm.TU.Sc2ySwM_228.1921 Anthoceros agrestis HOM05D006526 ORTHO05D008496 3.3e-06 55.1 51 51.0
Pp3c2_22020 Physcomitrium patens HOM05D006526 ORTHO05D008496 3.3e-06 55.1 43 58.1


User provided reference genes

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