Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046982 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 6.7e-249 863.6 452 100.0
CSS0016486 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 4.1e-182 641.7 525 73.7
Dinv37725 Davidia involucrata HOM05D006581 ORTHO05D007870 1.3e-127 460.7 481 60.5
Rhsim07G0097400 Rhododendron simsii HOM05D006581 ORTHO05D007870 1.3e-127 460.7 481 60.1
Actinidia27421 Actinidia chinensis HOM05D006581 ORTHO05D007870 1.9e-126 456.8 482 60.0
Cfa012052 Carpinus fangiana HOM05D006581 ORTHO05D007870 5.3e-113 412.1 485 53.4
Haze_09013 Corylus avellana HOM05D006581 ORTHO05D007870 9.1e-113 411.4 485 53.6
QL12p015968 Quercus lobata HOM05D006581 ORTHO05D007870 2.1e-109 400.2 486 53.9
Dinv39047 Davidia involucrata HOM05D006581 ORTHO05D007870 3.6e-109 399.4 481 55.5
Hma1.2p1_0017F.1_g011220 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 3.6e-109 399.4 482 52.5
Hma1.2p1_0017F.1_g011230 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 3.6e-109 399.4 482 52.5
Lj8A253T47 Lonicera japonica HOM05D006581 ORTHO05D007870 3.3e-107 392.9 481 53.0
CiPaw.08G049100 Carya illinoinensis HOM05D006581 ORTHO05D007870 1.1e-105 387.9 486 52.3
GSVIVG01019912001 Vitis vinifera HOM05D006581 ORTHO05D007870 5.3e-105 385.6 491 52.3
Ciclev10014277m.g Citrus clementina HOM05D006581 ORTHO05D007870 7.7e-104 381.7 490 51.0
Atru.chr12.1085 Acer truncatum HOM05D006581 ORTHO05D007870 1.9e-102 377.1 487 50.3
FAN17G3070 Fragaria x ananassa HOM05D006581 ORTHO05D007870 9.4e-102 374.8 488 50.0
Potri.008G016000 Populus trichocarpa HOM05D006581 ORTHO05D007870 3.6e-101 372.9 493 51.7
FAN12G3574 Fragaria x ananassa HOM05D006581 ORTHO05D007870 2.3e-100 370.2 488 49.4
FvH4_4g06790 Fragaria vesca HOM05D006581 ORTHO05D007870 4.0e-100 369.4 488 49.4
RcHm_v2.0_Chr4g0398711 Rosa chinensis HOM05D006581 ORTHO05D007870 4.0e-100 369.4 487 50.3
Sabra08G0009700 Salix brachista HOM05D006581 ORTHO05D007870 4.0e-100 369.4 493 51.1
Prupe.1G071100 Prunus persica HOM05D006581 ORTHO05D007870 4.8e-98 362.5 487 50.1
TAR629G0084 Trochodendron aralioides HOM05D006581 ORTHO05D007870 1.8e-97 360.5 486 50.8
ECA233G4444 Erigeron canadensis HOM05D006581 ORTHO05D007870 3.1e-97 359.8 482 47.1
TWI38G0425 Tripterygium wilfordii HOM05D006581 ORTHO05D007870 5.4e-97 359.0 491 49.5
Lsat_1_v5_gn_8_138880 Lactuca sativa HOM05D006581 ORTHO05D007870 1.6e-96 357.5 480 46.9
Lj8C252T14 Lonicera japonica HOM05D006581 ORTHO05D007870 1.6e-96 357.5 481 49.7
Duzib128G1875 Durio zibethinus HOM05D006581 ORTHO05D007870 2.7e-96 356.7 492 49.2
MD15G1394600 Malus domestica HOM05D006581 ORTHO05D007870 2.7e-96 356.7 490 48.8
Thecc.10G119000 Theobroma cacao HOM05D006581 ORTHO05D007870 2.7e-96 356.7 490 49.4
Cpa.g.sc33.130 Carica papaya HOM05D006581 ORTHO05D007870 2.3e-95 353.6 497 47.5
Sopen08g028170 Solanum pennellii HOM05D006581 ORTHO05D007870 3.3e-94 349.7 499 47.3
Solyc08g079810.4 Solanum lycopersicum HOM05D006581 ORTHO05D007870 1.6e-93 347.4 494 46.8
Nitab4.5_0010186g0020 Nicotiana tabacum HOM05D006581 ORTHO05D007870 2.8e-93 346.7 483 47.0
Manes.10G064500 Manihot esculenta HOM05D006581 ORTHO05D007870 3.6e-93 346.3 457 51.2
FAN07G0243 Fragaria x ananassa HOM05D006581 ORTHO05D007870 6.1e-93 345.5 511 46.4
Peaxi162Scf00620g00237 Petunia axillaris HOM05D006581 ORTHO05D007870 1.0e-92 344.7 482 47.5
Gorai.N007200 Gossypium raimondii HOM05D006581 ORTHO05D007870 1.4e-92 344.4 489 48.5
Oeu001905.1 Olea europaea HOM05D006581 ORTHO05D007870 3.0e-92 343.2 479 49.9
PGSC0003DMG400003942 Solanum tuberosum HOM05D006581 ORTHO05D007870 3.0e-92 343.2 494 46.2
DCAR_000885 Daucus carota HOM05D006581 ORTHO05D007870 5.2e-92 342.4 481 48.4
Gohir.D06G178000 Gossypium hirsutum HOM05D006581 ORTHO05D007870 5.2e-92 342.4 490 47.8
Nn3g19980 Nelumbo nucifera HOM05D006581 ORTHO05D007870 6.8e-92 342.0 484 46.9
Gohir.A06G170200 Gossypium hirsutum HOM05D006581 ORTHO05D007870 1.2e-91 341.3 490 47.6
CANSAT78G1168 Cannabis sativa HOM05D006581 ORTHO05D007870 1.3e-90 337.8 485 46.0
Nitab4.5_0005167g0030 Nicotiana tabacum HOM05D006581 ORTHO05D007870 1.3e-90 337.8 492 45.5
ClCG00G000120 Citrullus lanatus HOM05D006581 ORTHO05D007870 2.2e-90 337.0 487 46.6
Sed0002136 Sechium edule HOM05D006581 ORTHO05D007870 2.8e-90 336.7 487 47.2
ClCG10G003370 Citrullus lanatus HOM05D006581 ORTHO05D007870 1.1e-89 334.7 487 46.4
AUR62004835 Chenopodium quinoa HOM05D006581 ORTHO05D007870 1.8e-89 334.0 489 45.4
Cc03_g06340 Coffea canephora HOM05D006581 ORTHO05D007870 7.0e-89 332.0 483 47.2
AUR62040923 Chenopodium quinoa HOM05D006581 ORTHO05D007870 1.0e-87 328.2 489 45.2
Eucgr.E00519 Eucalyptus grandis HOM05D006581 ORTHO05D007870 1.3e-87 327.8 497 45.5
Aqoxy7G00548 Aquilegia oxysepala HOM05D006581 ORTHO05D007870 2.3e-84 317.0 485 43.3
Lalb_Chr01g0006991 Lupinus albus HOM05D006581 ORTHO05D007870 1.2e-83 314.7 486 44.4
Sc01g0009010 Simmondsia chinensis HOM05D006581 ORTHO05D007870 2.0e-83 313.9 487 44.6
Hund14684 Selenicereus undatus HOM05D006581 ORTHO05D007870 1.7e-82 310.8 489 44.8
EL10Ac5g12666 Beta vulgaris HOM05D006581 ORTHO05D007870 6.4e-82 308.9 494 43.1
Migut.E01071 Erythranthe guttata HOM05D006581 ORTHO05D007870 8.3e-82 308.5 482 46.3
MELO3C014006.2 Cucumis melo HOM05D006581 ORTHO05D007870 1.9e-81 307.4 487 44.8
CsaV3_3G003400 Cucumis sativus L. HOM05D006581 ORTHO05D007870 2.4e-81 307.0 487 44.8
arahy.Tifrunner.gnm1.ann1.J373DC Arachis hypogaea HOM05D006581 ORTHO05D007870 1.6e-80 304.3 491 44.2
Lj3g0012962 Lotus japonicus HOM05D006581 ORTHO05D007870 6.0e-80 302.4 492 43.9
arahy.Tifrunner.gnm1.ann1.MU0C19 Arachis hypogaea HOM05D006581 ORTHO05D007870 2.3e-79 300.4 491 44.0
Ah.02g116280 Amaranthus hybridus HOM05D006581 ORTHO05D007870 7.3e-78 295.4 485 41.0
Ca_14132_v3 Cicer arietinum L. HOM05D006581 ORTHO05D007870 6.2e-77 292.4 497 41.4
AT1G73970 Arabidopsis thaliana HOM05D006581 ORTHO05D007870 4.0e-76 289.7 481 42.2
Aa31LG4G4270 Aethionema arabicum HOM05D006581 ORTHO05D007870 5.8e-75 285.8 485 40.4
Sp5g29170 Schrenkiella parvula HOM05D006581 ORTHO05D007870 7.5e-75 285.4 487 41.5
THA.LOC104812128 Tarenaya hassleriana HOM05D006581 ORTHO05D007870 9.8e-75 285.0 460 42.4
CARHR067090 Cardamine hirsuta HOM05D006581 ORTHO05D007870 6.4e-74 282.3 477 41.9
AL2G33810 Arabidopsis lyrata HOM05D006581 ORTHO05D007870 8.3e-74 282.0 485 41.4
PSO782G3179 Papaver somniferum HOM05D006581 ORTHO05D007870 2.4e-73 280.4 493 41.2
SGA_v2.0_scaffold196G40922 Striga asiatica HOM05D006581 ORTHO05D007870 3.2e-73 280.0 481 42.2
Carub.0002s2075 Capsella rubella HOM05D006581 ORTHO05D007870 1.2e-72 278.1 481 41.0
Thhalv10018136m.g Eutrema salsugineum HOM05D006581 ORTHO05D007870 1.2e-72 278.1 482 40.9
PSO478G1557 Papaver somniferum HOM05D006581 ORTHO05D007870 3.5e-72 276.6 492 40.9
SalBow7G1099 Salvia bowleyana HOM05D006581 ORTHO05D007870 6.0e-72 275.8 480 43.1
BraA07t31529Z Brassica rapa HOM05D006581 ORTHO05D007870 5.1e-71 272.7 471 40.8
TPR.G5149 Trifolium pratense HOM05D006581 ORTHO05D007870 8.6e-71 271.9 478 39.1
BolC6t39844H Brassica oleracea HOM05D006581 ORTHO05D007870 1.9e-70 270.8 477 41.3
A07p39830 Brassica napus HOM05D006581 ORTHO05D007870 3.3e-70 270.0 471 40.6
C06p48090 Brassica napus HOM05D003462 ORTHO05D007870 4.3e-70 269.6 476 41.0
SHI19174 Sapria himalayana HOM05D006581 ORTHO05D007870 4.3e-70 269.6 492 40.2
ClCG00G004880 Citrullus lanatus HOM05D006581 ORTHO05D007870 8.1e-69 265.4 422 44.8
HanXRQChr04g0124681 Helianthus annuus HOM05D006581 ORTHO05D007870 7.5e-67 258.8 414 42.5
Medtr3g010350 Medicago truncatula HOM05D006581 ORTHO05D007870 2.9e-66 256.9 500 38.6
Psat7g256920 Pisum sativum HOM05D006581 ORTHO05D007870 6.4e-66 255.8 500 37.2
COL.COLO4_10009 Corchorus olitorius HOM05D006581 ORTHO05D007870 2.7e-64 250.4 465 41.3
VMungo1080G1314 Vigna mungo HOM05D006581 ORTHO05D007870 7.8e-64 248.8 484 39.9
BcaC08g46826 Brassica carinata HOM05D006581 ORTHO05D007870 1.3e-63 248.1 472 40.0
MBI12_g26094_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 1.3e-63 248.1 475 40.0
Phvul.005G003000 Phaseolus vulgaris HOM05D006581 ORTHO05D007870 5.8e-59 232.6 483 38.3
Glyma.06G323200 Glycine max HOM05D006581 ORTHO05D007870 4.9e-58 229.6 489 39.1
MBI12_g05899_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 6.4e-58 229.2 475 39.8
unitig_26.g9687 Utricularia gibba HOM05D006581 ORTHO05D007870 3.6e-53 213.4 476 35.3
CDE05G1723 Ceratophyllum demersum HOM05D006581 ORTHO05D007870 1.8e-52 211.1 466 35.0
ATR0757G052 Amborella trichopoda HOM05D006581 ORTHO05D007870 3.8e-42 176.8 480 32.9
Hma1.2p1_0138F.1_g062900 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 9.3e-41 172.2 367 38.4
Medtr4g059740 Medicago truncatula HOM05D006581 ORTHO05D007870 2.1e-24 117.9 231 37.7
SEGI_01852 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 1.2e-16 92.0 511 27.2
vmacro14025 Vaccinium macrocarpon HOM05D006581 ORTHO05D007870 7.4e-14 82.8 50 84.0
Os02g0123400 Oryza sativa ssp. japonica HOM05D006581 ORTHO05D007870 3.7e-13 80.5 208 31.7
Sabra10G0190600 Salix brachista HOM05D006581 ORTHO05D007870 3.7e-13 80.5 109 48.6
Zm00001eb230550 Zea mays HOM05D006581 ORTHO05D007870 4.2e-09 67.0 207 28.0
Pp3c5_4510 Physcomitrium patens HOM05D006581 ORTHO05D007870 1.0e-07 62.4 517 23.6
Mapoly0035s0119 Marchantia polymorpha HOM05D006581 ORTHO05D007870 9.7e-06 55.8 203 27.1


User provided reference genes

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