Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046979 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.5e-49 199.1 93 100.0
CSS0009610 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 4.1e-44 181.0 92 92.4
CSS0042171 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 5.0e-42 174.1 92 87.0
CSS0002016 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 6.6e-42 173.7 93 88.2
CSS0035882 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.5e-41 171.8 93 87.1
CSS0025354 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 5.6e-41 170.6 93 87.1
CSS0018761 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.7e-37 159.1 92 79.3
CSS0001150 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.4e-36 156.0 92 80.4
CSS0047666 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 7.8e-35 150.2 92 78.3
CSS0024569 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 8.6e-34 146.7 97 74.2
CSS0042753 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 8.6e-34 146.7 97 74.2
CSS0043112 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 8.6e-34 146.7 97 74.2
CSS0016168 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.9e-33 145.6 97 73.2
Rhsim04G0054200 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.2e-30 136.3 92 69.6
Rhsim04G0107400 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.7e-29 131.3 92 66.3
Rhsim10G0179600 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.7e-29 131.3 92 65.2
Rhsim01G0194900 Rhododendron simsii HOM05D007230 ORTHO05D004756 6.4e-29 130.6 92 65.2
Rhsim11G0068500 Rhododendron simsii HOM05D007230 ORTHO05D004756 8.3e-29 130.2 92 64.1
Rhsim12G0049700 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.4e-28 128.6 92 66.3
Rhsim07G0087400 Rhododendron simsii HOM05D007230 ORTHO05D004756 6.0e-27 124.0 92 62.0
Psat1g026880 Pisum sativum HOM05D007230 ORTHO05D004756 4.3e-25 117.9 91 59.3
Psat2g117040 Pisum sativum HOM05D007230 ORTHO05D004756 4.3e-25 117.9 92 57.6
Psat0ss1196g0040 Pisum sativum HOM05D007230 ORTHO05D004756 2.1e-24 115.5 92 56.5
CSS0009938 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 4.7e-24 114.4 75 70.7
Psat7g056280 Pisum sativum HOM05D007230 ORTHO05D004756 6.2e-24 114.0 92 56.5
Psat0ss2585g0560 Pisum sativum HOM05D007230 ORTHO05D004756 1.1e-23 113.2 90 56.7
Psat5g083840 Pisum sativum HOM05D007230 ORTHO05D004756 1.1e-23 113.2 92 55.4
MELO3C030315.2 Cucumis melo HOM05D007230 ORTHO05D004756 7.6e-22 107.1 96 55.2
CSS0049413 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 8.4e-21 103.6 74 66.2
CSS0041454 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.1e-20 103.2 83 54.2
MELO3C029711.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.4e-20 102.8 92 48.9
MELO3C029660.2 Cucumis melo HOM05D007230 ORTHO05D004756 4.1e-20 101.3 92 51.1
MELO3C031996.2 Cucumis melo HOM05D007230 ORTHO05D004756 4.1e-20 101.3 112 50.9
MELO3C032792.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.2e-19 99.8 92 48.9
MELO3C031197.2 Cucumis melo HOM05D007230 ORTHO05D004756 4.6e-19 97.8 92 48.9
Psat0s1792g0040 Pisum sativum HOM05D000659 ORTHO05D000505 1.0e-18 96.7 85 52.9
MELO3C030814.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.7e-18 95.9 92 48.9
TWI73G0803 Tripterygium wilfordii HOM05D007230 ORTHO05D004756 2.3e-18 95.5 92 51.1
MELO3C029643.2 Cucumis melo HOM05D007230 ORTHO05D004756 2.5e-17 92.0 93 49.5
MELO3C031511.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.2e-16 89.7 81 51.9
MELO3C033490.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.8e-15 85.9 60 60.0
QL08p048522 Quercus lobata HOM05D000002 ORTHO05D000001 8.9e-15 83.6 88 46.6
QL04p097278 Quercus lobata HOM05D000002 ORTHO05D000001 2.0e-14 82.4 88 45.5
QL11p016059 Quercus lobata HOM05D000002 ORTHO05D000001 2.0e-14 82.4 88 45.5
MELO3C030889.2 Cucumis melo HOM05D007230 ORTHO05D004756 3.4e-14 81.6 58 62.1
MELO3C032119.2 Cucumis melo HOM05D007230 ORTHO05D004756 4.4e-14 81.3 76 47.4
Psat5g096840 Pisum sativum HOM05D007230 ORTHO05D004756 5.8e-14 80.9 57 63.2
QL10p052423 Quercus lobata HOM05D000002 ORTHO05D000001 2.2e-13 79.0 88 44.3
Rhsim05G0139800 Rhododendron simsii HOM05D007230 ORTHO05D004756 4.9e-13 77.8 54 61.1
QL02p069342 Quercus lobata HOM05D000002 ORTHO05D000001 8.4e-13 77.0 78 47.4
MELO3C032600.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.4e-12 76.3 58 58.6
Psat5g096800 Pisum sativum HOM05D007230 ORTHO05D004756 1.9e-12 75.9 53 62.3
QL09p045529 Quercus lobata HOM05D000002 ORTHO05D000001 7.1e-12 73.9 83 43.4
MELO3C033487.2 Cucumis melo HOM05D007230 ORTHO05D004756 2.1e-11 72.4 114 36.8
QL06p036226 Quercus lobata HOM05D000002 ORTHO05D000001 2.1e-11 72.4 101 40.6
QL11p002299 Quercus lobata HOM05D000002 ORTHO05D000001 2.1e-11 72.4 101 41.6
QL01p026368 Quercus lobata HOM05D000002 ORTHO05D000001 4.6e-11 71.2 101 41.6
QL04p089373 Quercus lobata HOM05D000002 ORTHO05D000001 4.6e-11 71.2 101 41.6
QL03p000720 Quercus lobata HOM05D000002 ORTHO05D000001 6.0e-11 70.9 101 40.6
MELO3C029746.2 Cucumis melo HOM05D007230 ORTHO05D004756 7.8e-11 70.5 50 58.0
PSO339G3339 Papaver somniferum HOM05D007230 ORTHO05D004756 1.0e-10 70.1 96 40.6
PSO675G0495 Papaver somniferum HOM05D007230 ORTHO05D004756 1.7e-10 69.3 96 38.5
QL05p073015 Quercus lobata HOM05D000002 ORTHO05D000001 1.7e-10 69.3 101 40.6
CSS0017405 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 2.3e-10 68.9 71 49.3
QL11p048818 Quercus lobata HOM05D000002 ORTHO05D000001 2.3e-10 68.9 101 38.6
QL02p084387 Quercus lobata HOM05D000002 ORTHO05D000001 3.0e-10 68.6 100 39.0
Rhsim12G0018900 Rhododendron simsii HOM05D007230 ORTHO05D004756 5.1e-10 67.8 45 66.7
MELO3C029164.2 Cucumis melo HOM05D007230 ORTHO05D004756 8.7e-10 67.0 47 59.6
PSO478G2157 Papaver somniferum HOM05D007230 ORTHO05D004756 2.5e-09 65.5 96 35.4
SHI49499 Sapria himalayana HOM05D000002 ORTHO05D000001 7.3e-09 63.9 91 33.0
SHI04462 Sapria himalayana HOM05D000002 ORTHO05D004756 1.3e-08 63.2 91 33.0
SHI03432 Sapria himalayana HOM05D007230 ORTHO05D004756 1.6e-08 62.8 91 33.0
SHI18717 Sapria himalayana HOM05D007230 ORTHO05D004756 1.6e-08 62.8 91 33.0
SHI39742 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-08 62.8 91 33.0
MELO3C029851.2 Cucumis melo HOM05D007230 ORTHO05D004756 2.1e-08 62.4 47 57.4
SHI09402 Sapria himalayana HOM05D007230 ORTHO05D004756 3.6e-08 61.6 91 31.9
SHI36897 Sapria himalayana HOM05D000002 ORTHO05D004756 3.6e-08 61.6 91 33.0
PSO832G0254 Papaver somniferum HOM05D007230 ORTHO05D004756 4.8e-08 61.2 96 36.5
SHI31375 Sapria himalayana HOM05D007230 ORTHO05D004756 6.2e-08 60.8 91 31.9
MELO3C033139.2 Cucumis melo HOM05D007230 ORTHO05D004756 8.1e-08 60.5 70 44.3
PSO339G5468 Papaver somniferum HOM05D007230 ORTHO05D004756 1.8e-07 59.3 96 32.3
QL04p092122 Quercus lobata HOM05D000002 ORTHO05D000001 1.8e-07 59.3 64 43.8
CSS0004170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004756 3.1e-07 58.5 34 76.5
SHI30625 Sapria himalayana HOM05D007230 ORTHO05D004756 5.3e-07 57.8 65 41.5
CSS0037544 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.0e-07 57.0 43 67.4
SHI26640 Sapria himalayana HOM05D007230 ORTHO05D004756 1.5e-06 56.2 91 31.9
Psat4g177800 Pisum sativum HOM05D007230 ORTHO05D004756 2.6e-06 55.5 41 58.5
Psat1g072080 Pisum sativum HOM05D007230 ORTHO05D004756 3.4e-06 55.1 50 52.0
Rhsim11G0119100 Rhododendron simsii HOM05D007230 ORTHO05D004756 5.8e-06 54.3 39 69.2
SHI50483 Sapria himalayana HOM05D000002 ORTHO05D000001 9.9e-06 53.5 83 30.1


User provided reference genes

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