Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046957 Camellia sinensis var. sinensis HOM05D005937 ORTHO05D008151 0.0e+00 1768.1 882 100.0
Actinidia00667 Actinidia chinensis HOM05D005937 ORTHO05D008151 0.0e+00 1392.5 890 81.1
Rhsim09G0179300 Rhododendron simsii HOM05D005937 ORTHO05D008151 0.0e+00 1325.1 897 77.7
GSVIVG01032777001 Vitis vinifera HOM05D005937 ORTHO05D008151 0.0e+00 1260.7 894 72.6
TAR633G1521 Trochodendron aralioides HOM05D005937 ORTHO05D008151 0.0e+00 1259.2 898 74.1
Hma1.2p1_0523F.1_g172080 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 0.0e+00 1256.5 824 75.5
Atru.chr12.85 Acer truncatum HOM05D005937 ORTHO05D008151 0.0e+00 1256.1 901 71.5
CiPaw.02G194600 Carya illinoinensis HOM05D005937 ORTHO05D008151 0.0e+00 1251.9 901 71.3
Dinv21757 Davidia involucrata HOM05D005937 ORTHO05D008151 0.0e+00 1250.3 904 74.1
Nitab4.5_0000058g0250 Nicotiana tabacum HOM05D005937 ORTHO05D008151 0.0e+00 1248.4 887 72.3
Potri.010G185800 Populus trichocarpa HOM05D005937 ORTHO05D008151 0.0e+00 1247.3 899 70.5
Nitab4.5_0000969g0030 Nicotiana tabacum HOM05D005937 ORTHO05D008151 0.0e+00 1243.0 888 71.8
Manes.10G010100 Manihot esculenta HOM05D005937 ORTHO05D008151 0.0e+00 1242.3 897 72.4
MD07G1224900 Malus domestica HOM05D005937 ORTHO05D008151 0.0e+00 1240.7 898 72.0
QL08p063536 Quercus lobata HOM05D005937 ORTHO05D008151 0.0e+00 1238.8 891 71.3
TWI09G1402 Tripterygium wilfordii HOM05D005937 ORTHO05D008151 0.0e+00 1238.4 863 73.7
Haze_17256 Corylus avellana HOM05D005937 ORTHO05D008151 0.0e+00 1233.8 896 70.6
Ciclev10030686m.g Citrus clementina HOM05D005937 ORTHO05D008151 0.0e+00 1233.4 896 72.1
vmacro10023 Vaccinium macrocarpon HOM05D005937 ORTHO05D008151 0.0e+00 1231.9 940 70.0
Prupe.2G253500 Prunus persica HOM05D005937 ORTHO05D008151 0.0e+00 1223.4 896 70.2
Thecc.10G012700 Theobroma cacao HOM05D005937 ORTHO05D008151 0.0e+00 1218.8 897 70.6
Sopen06g016900 Solanum pennellii HOM05D005937 ORTHO05D008151 0.0e+00 1216.4 888 70.4
Migut.F01477 Erythranthe guttata HOM05D005937 ORTHO05D008151 0.0e+00 1215.3 898 68.6
CAN.G19.18 Capsicum annuum HOM05D005937 ORTHO05D008151 0.0e+00 1214.9 887 70.2
Duzib114G0783 Durio zibethinus HOM05D005937 ORTHO05D008151 0.0e+00 1211.1 866 70.9
Solyc06g051080.4 Solanum lycopersicum HOM05D005937 ORTHO05D008151 0.0e+00 1210.3 888 70.3
Nn2g10945 Nelumbo nucifera HOM05D005937 ORTHO05D008151 0.0e+00 1204.1 894 70.0
Lj1C959G18 Lonicera japonica HOM05D005937 ORTHO05D008151 0.0e+00 1201.8 775 77.4
Sabra10G0143100 Salix brachista HOM05D005937 ORTHO05D008151 0.0e+00 1199.1 951 65.8
RcHm_v2.0_Chr1g0370701 Rosa chinensis HOM05D005937 ORTHO05D008151 0.0e+00 1196.4 900 68.4
FAN01G2918 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1191.8 900 67.6
FvH4_7g24830 Fragaria vesca HOM05D005937 ORTHO05D008151 0.0e+00 1189.9 900 67.3
FAN06G2004 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1184.9 900 67.2
Gorai.011G291300 Gossypium raimondii HOM05D005937 ORTHO05D008151 0.0e+00 1179.1 887 68.3
FAN03G2902 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1174.5 907 66.5
Gohir.A10G239000 Gossypium hirsutum HOM05D005937 ORTHO05D008151 0.0e+00 1173.3 876 68.9
Oeu011112.1 Olea europaea HOM05D005937 ORTHO05D008151 0.0e+00 1169.5 978 64.0
Cpa.g.sc19.149 Carica papaya HOM05D005937 ORTHO05D008151 0.0e+00 1165.6 928 65.6
Eucgr.J00183 Eucalyptus grandis HOM05D005937 ORTHO05D008151 0.0e+00 1155.6 831 68.5
Glyma.11G231700 Glycine max HOM05D005937 ORTHO05D008151 0.0e+00 1154.4 836 68.7
Glyma.18G025500 Glycine max HOM05D005937 ORTHO05D008151 0.0e+00 1149.4 886 66.3
Phvul.001G244900 Phaseolus vulgaris HOM05D005937 ORTHO05D008151 0.0e+00 1149.4 887 64.4
DCAR_024814 Daucus carota HOM05D005937 ORTHO05D008151 0.0e+00 1146.7 868 68.8
Duzib106G1087 Durio zibethinus HOM05D005937 ORTHO05D008151 0.0e+00 1145.6 892 67.7
Ca_15144_v3 Cicer arietinum L. HOM05D005937 ORTHO05D008151 0.0e+00 1141.3 850 67.6
Sed0020446 Sechium edule HOM05D005937 ORTHO05D008151 0.0e+00 1139.0 834 67.5
CsaV3_6G001960 Cucumis sativus L. HOM05D005937 ORTHO05D008151 0.0e+00 1138.3 840 66.9
HanXRQChr07g0203141 Helianthus annuus HOM05D005937 ORTHO05D008151 0.0e+00 1136.3 901 66.7
Ah.16g103770 Amaranthus hybridus HOM05D005937 ORTHO05D008151 0.0e+00 1134.0 893 64.3
Lalb_Chr23g0277021 Lupinus albus HOM05D005937 ORTHO05D008151 0.0e+00 1133.6 910 63.4
VMungo1383G1379 Vigna mungo HOM05D005937 ORTHO05D008151 0.0e+00 1131.3 886 65.2
Hund15900 Selenicereus undatus HOM05D005937 ORTHO05D008151 0.0e+00 1130.5 893 64.2
ClCG11G006010 Citrullus lanatus HOM05D005937 ORTHO05D008151 0.0e+00 1129.0 832 67.1
CANSAT56G2579 Cannabis sativa HOM05D005937 ORTHO05D008151 0.0e+00 1128.2 893 65.1
Medtr3g071440 Medicago truncatula HOM05D005937 ORTHO05D008151 0.0e+00 1124.4 888 65.8
Lj6g0019628 Lotus japonicus HOM05D005937 ORTHO05D008151 0.0e+00 1120.5 875 65.8
Lsat_1_v5_gn_2_123720 Lactuca sativa HOM05D005937 ORTHO05D008151 0.0e+00 1117.1 859 66.8
AT3G56040 Arabidopsis thaliana HOM05D005937 ORTHO05D008151 0.0e+00 1114.8 903 62.8
Cfa001293 Carpinus fangiana HOM05D005937 ORTHO05D008151 0.0e+00 1111.7 712 78.4
arahy.Tifrunner.gnm1.ann1.6RBS9T Arachis hypogaea HOM05D005937 ORTHO05D008151 0.0e+00 1109.7 837 65.4
arahy.Tifrunner.gnm1.ann1.0WF02T Arachis hypogaea HOM05D005937 ORTHO05D008151 0.0e+00 1108.6 837 65.1
EL10Ac2g04871 Beta vulgaris HOM05D005937 ORTHO05D008151 0.0e+00 1108.6 947 60.5
Thhalv10005783m.g Eutrema salsugineum HOM05D005937 ORTHO05D008151 0.0e+00 1107.0 904 62.3
TPR.G10616 Trifolium pratense HOM05D005937 ORTHO05D008151 0.0e+00 1104.0 887 63.6
ECA238G3710 Erigeron canadensis HOM05D005937 ORTHO05D008151 0.0e+00 1102.4 894 66.1
A09p48990 Brassica napus HOM05D005937 ORTHO05D008151 0.0e+00 1102.0 900 62.6
C08p31350 Brassica napus HOM05D005937 ORTHO05D008151 0.0e+00 1102.0 902 62.4
BraA09t40354Z Brassica rapa HOM05D005937 ORTHO05D008151 0.0e+00 1102.0 900 62.6
Aqoxy4G02431 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 0.0e+00 1101.3 824 68.0
AL5G37310 Arabidopsis lyrata HOM05D005937 ORTHO05D008151 0.0e+00 1101.3 909 62.4
Psat5g130440 Pisum sativum HOM05D005937 ORTHO05D008151 0.0e+00 1097.8 898 63.3
CARHR166110 Cardamine hirsuta HOM05D005937 ORTHO05D008151 0.0e+00 1095.5 902 62.3
Sp5g06500 Schrenkiella parvula HOM05D005937 ORTHO05D008151 0.0e+00 1093.6 906 61.7
THA.LOC104824329 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 0.0e+00 1093.6 898 61.9
Aa31LG10G10960 Aethionema arabicum HOM05D005937 ORTHO05D008151 0.0e+00 1090.1 908 61.5
THA.LOC104811372 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 0.0e+00 1087.8 906 61.8
Carub.0005s2277 Capsella rubella HOM05D005937 ORTHO05D008151 0.0e+00 1084.3 899 61.4
Peaxi162Scf00284g00620 Petunia axillaris HOM05D005937 ORTHO05D008151 4.2e-311 1071.2 885 64.7
unitig_60.g25670 Utricularia gibba HOM05D005937 ORTHO05D008151 3.9e-309 1064.7 916 61.1
PSO170G3027 Papaver somniferum HOM05D005937 ORTHO05D008151 7.3e-308 1060.4 860 64.8
PSO017G4998 Papaver somniferum HOM05D005937 ORTHO05D008151 1.2e-307 1059.7 863 63.8
FAN10G1632 Fragaria x ananassa HOM05D005937 ORTHO05D008151 3.6e-307 1058.1 912 62.1
PGR044G1548 Punica granatum HOM05D005937 ORTHO05D008151 2.0e-305 1052.4 875 62.5
AUR62012278 Chenopodium quinoa HOM05D005937 ORTHO05D008151 5.8e-305 1050.8 832 63.0
Cc02_g06180 Coffea canephora HOM05D005937 ORTHO05D008151 2.3e-301 1038.9 658 76.7
Gohir.D10G250900 Gossypium hirsutum HOM05D005937 ORTHO05D008151 4.6e-294 1014.6 754 69.4
MBI15_g40751_MAGBIO Magnolia biondii HOM05D005937 ORTHO05D008151 1.1e-292 1010.0 879 62.8
ATR0174G021 Amborella trichopoda HOM05D005937 ORTHO05D008151 1.5e-289 999.6 854 58.8
MELO3C008313.2 Cucumis melo HOM05D005937 ORTHO05D008151 2.4e-287 992.3 731 67.9
AUR62022920 Chenopodium quinoa HOM05D005937 ORTHO05D008151 1.4e-282 976.5 755 64.2
MD01G1156200 Malus domestica HOM05D005937 ORTHO05D008151 1.2e-281 973.4 715 68.5
Os05g0468600 Oryza sativa ssp. japonica HOM05D005937 ORTHO05D008151 1.2e-281 973.4 819 58.6
COL.COLO4_25772 Corchorus olitorius HOM05D005937 ORTHO05D008151 5.1e-277 958.0 801 64.5
Zm00001eb351780 Zea mays HOM05D005937 ORTHO05D008151 9.0e-274 947.2 865 55.3
Sc10g0002520 Simmondsia chinensis HOM05D005937 ORTHO05D008151 4.0e-266 921.8 706 66.9
SGA_v2.0_scaffold395G50730 Striga asiatica HOM05D005937 ORTHO05D008151 5.1e-261 904.8 744 63.6
AagrBONN_evm.TU.Sc2ySwM_368.2798 Anthoceros agrestis HOM05D005937 ORTHO05D008151 1.8e-237 826.6 872 49.1
Pp3c22_15610 Physcomitrium patens HOM05D005937 ORTHO05D008151 1.8e-229 800.0 878 48.4
Mapoly0007s0127 Marchantia polymorpha HOM05D005937 ORTHO05D008151 2.6e-228 796.2 852 47.4
SMO141G0067 Selaginella moellendorffii HOM05D005937 ORTHO05D008151 3.6e-214 749.2 760 50.1
Hma1.2p1_0523F.1_g172070 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 1.4e-213 747.3 505 75.4
HPP92_007567 Vanilla planifolia HOM05D005937 ORTHO05D008151 2.0e-201 706.8 806 50.1
Actinidia00964 Actinidia chinensis HOM05D005937 ORTHO05D008151 4.3e-199 699.1 497 72.0
CBR_g61489 Chara braunii HOM05D005937 ORTHO05D008151 1.3e-179 634.4 583 50.8
PRCOL_00004696 Prasinoderma coloniale HOM05D005937 ORTHO05D008151 5.1e-152 542.7 822 38.4
CDE04G2743 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 7.6e-148 528.9 601 50.7
Cre12.g554250 Chlamydomonas reinhardtii HOM05D005937 ORTHO05D008151 7.9e-145 518.8 888 36.7
RhsimUnG0153700 Rhododendron simsii HOM05D005937 ORTHO05D008151 1.0e-131 475.3 313 77.0
Rhsim12G0073000 Rhododendron simsii HOM05D005937 ORTHO05D008151 2.0e-124 451.1 312 74.4
HPP92_007578 Vanilla planifolia HOM05D005937 ORTHO05D008151 1.6e-116 424.9 390 55.9
BcaB01g00040 Brassica carinata HOM05D005937 ORTHO05D008151 5.9e-116 422.9 406 57.6
Aqoxy1G01260 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 5.4e-93 346.7 197 80.2
Aqoxy2G01148 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 1.2e-92 345.5 188 83.5
Aqoxy4G01451 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 7.8e-92 342.8 186 83.9
SEGI_34891 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 2.9e-91 340.9 244 66.8
CDE04G2646 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 2.8e-89 334.3 246 65.0
HPP92_007579 Vanilla planifolia HOM05D005937 ORTHO05D008151 5.2e-80 303.5 217 69.1
MCO05G015 Micromonas commoda HOM05D005937 ORTHO05D008151 1.4e-69 268.9 437 35.0
BolC8t50756H Brassica oleracea HOM05D005937 ORTHO05D008151 1.9e-69 268.5 203 60.1
Ah.00g001390 Amaranthus hybridus HOM05D005937 ORTHO05D008151 1.6e-41 175.6 147 55.1
SEGI_09306 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 1.7e-38 165.6 144 50.7
vmacro09901 Vaccinium macrocarpon HOM05D003975 ORTHO05D009762 4.3e-34 151.0 159 50.3
Aqoxy4G01461 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 1.9e-29 135.6 165 49.7
Rhsim12G0072900 Rhododendron simsii HOM05D005937 ORTHO05D008151 1.9e-13 82.4 50 84.0
SEGI_37602 Sequoiadendron giganteum HOM05D005937 ORTHO05D026713 5.3e-08 64.3 201 31.8
Aqoxy4G00767 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 7.0e-08 63.9 86 48.8
Hund15853 Selenicereus undatus HOM05D005937 ORTHO05D026713 4.5e-07 61.2 107 41.1
Actinidia04126 Actinidia chinensis HOM05D005937 ORTHO05D019459 1.3e-06 59.7 73 50.7


User provided reference genes

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