Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 6.4e-93 344.0 162 100.0
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 9.2e-92 340.1 162 98.8
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 3.5e-91 338.2 162 98.1
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 3.5e-83 311.6 158 88.6
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 3.9e-82 308.1 158 89.2
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 5.1e-82 307.8 162 87.7
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 5.6e-81 304.3 158 86.7
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 2.1e-80 302.4 158 86.7
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 6.2e-80 300.8 158 87.3
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 8.1e-80 300.4 158 86.1
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 1.8e-79 299.3 158 86.1
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 2.4e-79 298.9 161 84.5
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 5.3e-79 297.7 158 83.5
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 9.0e-79 297.0 158 85.4
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 9.0e-79 297.0 158 85.4
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 2.6e-78 295.4 158 84.8
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 3.4e-78 295.0 158 84.2
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 3.4e-78 295.0 158 85.4
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 5.8e-78 294.3 158 84.8
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 7.6e-78 293.9 158 84.2
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 9.9e-78 293.5 158 83.5
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 1.7e-77 292.7 158 83.5
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 1.7e-77 292.7 158 85.4
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 1.7e-77 292.7 156 85.3
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 2.9e-77 292.0 150 87.3
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 2.9e-77 292.0 158 84.2
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 2.9e-77 292.0 158 84.2
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 2.9e-77 292.0 158 83.5
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 3.8e-77 291.6 158 83.5
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 4.9e-77 291.2 149 87.9
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 6.4e-77 290.8 158 84.2
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 6.4e-77 290.8 162 82.1
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 8.4e-77 290.4 158 82.3
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 1.4e-76 289.7 159 83.6
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 1.4e-76 289.7 155 85.8
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.4e-76 289.7 155 85.8
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.4e-76 289.7 155 85.8
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 3.2e-76 288.5 154 81.8
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 4.2e-76 288.1 158 81.0
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 4.2e-76 288.1 148 87.8
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 4.2e-76 288.1 158 81.6
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 4.2e-76 288.1 158 81.6
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 4.2e-76 288.1 158 81.6
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 5.4e-76 287.7 156 82.7
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 5.4e-76 287.7 156 82.7
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 5.4e-76 287.7 157 83.4
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 7.1e-76 287.3 158 82.9
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 9.3e-76 287.0 158 81.0
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 9.3e-76 287.0 158 80.4
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 9.3e-76 287.0 156 82.7
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 9.3e-76 287.0 159 82.4
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 9.3e-76 287.0 158 81.6
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.6e-75 286.2 152 86.2
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 2.1e-75 285.8 156 82.1
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 2.7e-75 285.4 158 81.0
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 7.9e-75 283.9 154 81.2
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 1.0e-74 283.5 158 78.5
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 1.0e-74 283.5 158 78.5
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 1.7e-74 282.7 158 81.0
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 1.7e-74 282.7 155 83.9
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 3.9e-74 281.6 154 80.5
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 3.9e-74 281.6 158 81.0
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 6.6e-74 280.8 158 77.8
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 8.7e-74 280.4 158 77.2
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 8.7e-74 280.4 158 77.8
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 1.1e-73 280.0 158 77.2
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 1.9e-73 279.3 158 80.4
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 2.5e-73 278.9 158 77.2
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 2.5e-73 278.9 158 79.1
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 3.3e-73 278.5 157 80.3
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 3.3e-73 278.5 158 77.2
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 4.3e-73 278.1 158 84.2
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 5.6e-73 277.7 159 79.2
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 5.6e-73 277.7 211 64.0
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 7.4e-73 277.3 158 77.2
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 2.8e-72 275.4 158 76.6
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 4.8e-72 274.6 158 75.9
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 4.8e-72 274.6 159 75.5
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 8.1e-72 273.9 156 77.6
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 8.1e-72 273.9 148 86.5
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 3.1e-71 271.9 166 73.5
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 3.1e-71 271.9 166 73.5
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 3.1e-71 271.9 159 76.1
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 5.3e-71 271.2 150 78.7
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 5.8e-70 267.7 156 76.3
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 2.2e-69 265.8 162 74.7
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 2.2e-69 265.8 155 74.8
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 2.9e-69 265.4 156 77.6
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 3.8e-69 265.0 157 76.4
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 3.8e-69 265.0 159 75.5
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 3.2e-68 261.9 155 73.5
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 5.5e-68 261.2 158 77.8
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 2.1e-67 259.2 149 77.2
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 3.5e-67 258.5 162 71.6
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 6.0e-67 257.7 159 73.0
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 5.1e-66 254.6 135 83.7
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 5.1e-66 254.6 137 82.5
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 1.5e-65 253.1 135 83.7
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 1.1e-63 246.9 157 69.4
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 2.4e-63 245.7 144 77.8
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 4.0e-63 245.0 135 81.5
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 5.3e-63 244.6 138 81.2
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 2.6e-62 242.3 152 75.7
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 1.6e-59 233.0 117 89.7
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 4.3e-57 224.9 138 74.6
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 5.7e-57 224.6 116 86.2
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 1.8e-55 219.5 183 60.7
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 1.7e-53 213.0 114 85.1
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 2.2e-53 212.6 152 61.8
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 8.4e-53 210.7 153 61.4
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 2.5e-52 209.1 116 81.0
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 3.2e-52 208.8 155 68.4
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 4.2e-52 208.4 121 81.0
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 2.7e-51 205.7 152 59.9
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 5.1e-50 201.4 102 88.2
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 8.2e-48 194.1 114 75.4
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 4.1e-47 191.8 129 68.2
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 5.9e-46 188.0 96 84.4
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 2.2e-45 186.0 95 88.4
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 3.0e-42 175.6 102 73.5
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 1.0e-37 160.6 157 54.8
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 2.2e-37 159.5 132 58.3
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 2.9e-37 159.1 86 86.0
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 2.9e-37 159.1 135 61.5
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 6.5e-37 157.9 85 84.7
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 5.5e-28 128.3 67 86.6
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 1.9e-20 103.2 52 86.5
BolC2t07570H Brassica oleracea HOM05D006321 ORTHO05D007929 6.3e-16 88.2 57 70.2
C02p14450 Brassica napus HOM05D006321 ORTHO05D007929 6.3e-08 61.6 68 47.1


User provided reference genes

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