Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046950 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 8.6e-73 277.3 189 100.0
CSS0044056 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 7.3e-72 274.2 189 98.9
Dinv44343 Davidia involucrata HOM05D007152 ORTHO05D008912 3.2e-43 179.1 189 60.3
Prupe.1G130200 Prunus persica HOM05D007152 ORTHO05D008912 3.6e-39 165.6 197 72.1
MD16G1162700 Malus domestica HOM05D007152 ORTHO05D008912 1.7e-36 156.8 197 69.5
RcHm_v2.0_Chr4g0423591 Rosa chinensis HOM05D007152 ORTHO05D008912 4.9e-36 155.2 196 68.9
TAR362G0707 Trochodendron aralioides HOM05D007152 ORTHO05D008912 4.9e-36 155.2 193 56.0
CANSAT78G0935 Cannabis sativa HOM05D007152 ORTHO05D008912 7.1e-35 151.4 197 56.3
GSVIVG01035097001 Vitis vinifera HOM05D007152 ORTHO05D008912 1.2e-34 150.6 189 58.7
Hma1.2p1_1352F.1_g277500 Hydrangea macrophylla HOM05D007152 ORTHO05D008912 1.7e-33 146.7 195 57.9
Nitab4.5_0007965g0010 Nicotiana tabacum HOM05D007152 ORTHO05D008912 3.0e-33 146.0 206 49.0
PGSC0003DMG400017287 Solanum tuberosum HOM05D007152 ORTHO05D008912 3.0e-33 146.0 199 53.3
CiPaw.02G079300 Carya illinoinensis HOM05D007152 ORTHO05D008912 1.3e-31 140.6 190 63.7
MBI18_g04558_MAGBIO Magnolia biondii HOM05D000387 ORTHO05D008912 2.1e-31 139.8 187 48.7
FvH4_4g18790 Fragaria vesca HOM05D007152 ORTHO05D008912 3.6e-31 139.0 198 66.2
FAN12G2857 Fragaria x ananassa HOM05D007152 ORTHO05D008912 3.6e-31 139.0 198 66.2
FAN12G4239 Fragaria x ananassa HOM05D007152 ORTHO05D008912 8.1e-31 137.9 198 65.7
FAN17G1647 Fragaria x ananassa HOM05D007152 ORTHO05D008912 1.8e-30 136.7 198 65.7
Haze_01149 Corylus avellana HOM05D007152 ORTHO05D008912 2.4e-30 136.3 190 55.8
FAN07G1963 Fragaria x ananassa HOM05D007152 ORTHO05D008912 9.0e-30 134.4 195 66.2
Thecc.04G290300 Theobroma cacao HOM05D007152 ORTHO05D008912 4.5e-29 132.1 204 46.6
TWI73G1002 Tripterygium wilfordii HOM05D007152 ORTHO05D008912 5.8e-29 131.7 195 54.9
Gorai.011G193700 Gossypium raimondii HOM05D007152 ORTHO05D008912 7.6e-29 131.3 202 47.0
Peaxi162Scf00065g10111 Petunia axillaris HOM05D007152 ORTHO05D008912 7.6e-29 131.3 205 53.7
CiPaw.01G144800 Carya illinoinensis HOM05D007152 ORTHO05D008912 2.2e-28 129.8 193 54.9
QL06p010801 Quercus lobata HOM05D007152 ORTHO05D008912 2.2e-28 129.8 190 46.8
Gohir.A10G167100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 2.4e-27 126.3 202 45.5
Cc03_g01440 Coffea canephora HOM05D007152 ORTHO05D008912 3.2e-27 125.9 196 57.7
Gohir.D10G173100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 3.2e-27 125.9 202 45.5
Manes.03G199400 Manihot esculenta HOM05D007152 ORTHO05D008912 7.1e-27 124.8 192 46.4
Nitab4.5_0000306g0360 Nicotiana tabacum HOM05D007152 ORTHO05D008912 7.1e-27 124.8 201 52.7
Solyc07g055660.2 Solanum lycopersicum HOM05D007152 ORTHO05D008912 2.7e-26 122.9 190 45.8
Nn6g34202 Nelumbo nucifera HOM05D007152 ORTHO05D008912 6.0e-26 121.7 190 48.4
Sopen07g029030 Solanum pennellii HOM05D007152 ORTHO05D008912 7.9e-26 121.3 198 51.0
Cfa015435 Carpinus fangiana HOM05D007152 ORTHO05D008912 1.8e-25 120.2 190 56.8
COL.COLO4_13806 Corchorus olitorius HOM05D007152 ORTHO05D008912 3.9e-25 119.0 191 42.4
Actinidia14275 Actinidia chinensis HOM05D007152 ORTHO05D008912 6.7e-25 118.2 196 49.0
Duzib212G0417 Durio zibethinus HOM05D007152 ORTHO05D008912 8.7e-25 117.9 205 44.4
Duzib151G0510 Durio zibethinus HOM05D007152 ORTHO05D008912 5.6e-24 115.2 200 43.0
Sed0011406 Sechium edule HOM05D007152 ORTHO05D008912 4.8e-23 112.1 196 59.7
Actinidia13384 Actinidia chinensis HOM05D007152 ORTHO05D008912 1.1e-22 110.9 188 57.4
Dinv29715 Davidia involucrata HOM05D007152 ORTHO05D008912 2.4e-22 109.8 158 71.5
Phvul.003G108000 Phaseolus vulgaris HOM05D007152 ORTHO05D008912 3.4e-21 105.9 195 46.2
CARHR081420 Cardamine hirsuta HOM05D007152 ORTHO05D008912 7.6e-21 104.8 208 44.2
THA.LOC104818902 Tarenaya hassleriana HOM05D007152 ORTHO05D008912 1.3e-20 104.0 203 36.5
VMungo1215G1115 Vigna mungo HOM05D007152 ORTHO05D008912 1.7e-20 103.6 196 44.9
Sc13g0003130 Simmondsia chinensis HOM05D007152 ORTHO05D008912 2.2e-20 103.2 125 68.0
ClCG06G004920 Citrullus lanatus HOM05D007152 ORTHO05D008912 4.9e-20 102.1 192 41.1
MELO3C021305.2 Cucumis melo HOM05D007152 ORTHO05D008912 4.9e-20 102.1 194 41.2
Glyma.17G029000 Glycine max HOM05D007152 ORTHO05D008912 6.4e-20 101.7 195 46.2
AL3G17910 Arabidopsis lyrata HOM05D007152 ORTHO05D008912 1.4e-19 100.5 210 47.1
AT3G06780 Arabidopsis thaliana HOM05D007152 ORTHO05D008912 1.4e-19 100.5 209 46.9
Lsat_1_v5_gn_3_21801 Lactuca sativa HOM05D007152 ORTHO05D008912 1.9e-19 100.1 191 43.5
Lj4g0009216 Lotus japonicus HOM05D007152 ORTHO05D008912 4.2e-19 99.0 186 39.8
Potri.008G211000 Populus trichocarpa HOM05D007152 ORTHO05D008912 4.2e-19 99.0 188 46.8
Migut.G00124 Erythranthe guttata HOM05D007152 ORTHO05D008912 9.3e-19 97.8 193 37.3
Carub.0003s0633 Capsella rubella HOM05D007152 ORTHO05D008912 1.6e-18 97.1 210 43.8
Aqoxy2G02883 Aquilegia oxysepala HOM05D007152 ORTHO05D008912 2.7e-18 96.3 204 40.7
Lsat_1_v5_gn_6_76040 Lactuca sativa HOM05D007152 ORTHO05D008912 3.5e-18 95.9 191 49.2
Migut.G00085 Erythranthe guttata HOM05D007152 ORTHO05D008912 6.0e-18 95.1 189 38.6
SalBow2G3473 Salvia bowleyana HOM05D007152 ORTHO05D008912 1.0e-17 94.4 194 38.7
Glyma.07G244800 Glycine max HOM05D007152 ORTHO05D008912 3.9e-17 92.4 190 44.7
Medtr4g120400 Medicago truncatula HOM05D007152 ORTHO05D008912 3.9e-17 92.4 194 56.2
Manes.15G009801 Manihot esculenta HOM05D007152 ORTHO05D008912 5.1e-17 92.0 65 64.6
Nn4g25735 Nelumbo nucifera HOM05D007152 ORTHO05D008912 5.1e-17 92.0 157 46.5
Ca_21475_v3 Cicer arietinum L. HOM05D007152 ORTHO05D008912 8.7e-17 91.3 193 53.9
C05p60530 Brassica napus HOM05D007152 ORTHO05D008912 1.5e-16 90.5 205 39.5
BolC5t34707H Brassica oleracea HOM05D007152 ORTHO05D008912 1.5e-16 90.5 205 39.5
Nn2g11629 Nelumbo nucifera HOM05D000191 ORTHO05D000122 1.5e-16 90.5 176 39.8
Sabra10G0005500 Salix brachista HOM05D007152 ORTHO05D008912 3.3e-16 89.4 196 53.6
Atru.chr4.2916 Acer truncatum HOM05D007152 ORTHO05D008912 5.6e-16 88.6 200 41.5
PGR004G0508 Punica granatum HOM05D007152 ORTHO05D008912 5.6e-16 88.6 192 38.0
Thhalv10022432m.g Eutrema salsugineum HOM05D007152 ORTHO05D008912 9.6e-16 87.8 208 43.3
Potri.010G006600 Populus trichocarpa HOM05D007152 ORTHO05D008912 9.6e-16 87.8 194 44.8
Aa31LG5G17390 Aethionema arabicum HOM05D007152 ORTHO05D008912 2.1e-15 86.7 206 41.7
CsaV3_6G022730 Cucumis sativus L. HOM05D007152 ORTHO05D008912 2.1e-15 86.7 183 38.8
DCAR_027047 Daucus carota HOM05D007152 ORTHO05D008912 4.8e-15 85.5 156 51.3
Eucgr.B01571 Eucalyptus grandis HOM05D007152 ORTHO05D008912 8.2e-15 84.7 190 43.2
ECA246G2204 Erigeron canadensis HOM05D007152 ORTHO05D008912 1.1e-14 84.3 191 37.2
Eucgr.H03966 Eucalyptus grandis HOM05D007152 ORTHO05D008912 6.9e-14 81.6 201 42.8
Lalb_Chr20g0121161 Lupinus albus HOM05D007152 ORTHO05D008912 2.0e-13 80.1 66 59.1
Sp3g05760 Schrenkiella parvula HOM05D007152 ORTHO05D008912 2.6e-13 79.7 208 41.3
Lalb_Chr12g0201151 Lupinus albus HOM05D007152 ORTHO05D008912 1.0e-12 77.8 137 51.8
AUR62018060 Chenopodium quinoa HOM05D007152 ORTHO05D008912 1.3e-12 77.4 60 60.0
BolC3t16516H Brassica oleracea HOM05D007152 ORTHO05D008912 1.7e-12 77.0 206 35.4
EL10Ac3g06653 Beta vulgaris HOM05D007152 ORTHO05D008912 2.9e-12 76.3 56 67.9
Sabra08G0151100 Salix brachista HOM05D007152 ORTHO05D008912 3.8e-12 75.9 57 66.7
Ah.04g153700 Amaranthus hybridus HOM05D007152 ORTHO05D008912 4.9e-12 75.5 56 62.5
Ciclev10006039m.g Citrus clementina HOM05D007152 ORTHO05D008912 4.9e-12 75.5 193 46.6
A03p34880 Brassica napus HOM05D007152 ORTHO05D008912 8.4e-12 74.7 63 63.5
BNapus_Darmor_BZH_scaffold_117p00080 Brassica napus HOM05D007152 ORTHO05D008912 1.4e-11 73.9 200 35.0
Eucgr.G02132 Eucalyptus grandis HOM05D007152 ORTHO05D008912 2.5e-11 73.2 64 60.9
ECA240G1188 Erigeron canadensis HOM05D007152 ORTHO05D008912 4.2e-11 72.4 185 32.4
Eucgr.G02139 Eucalyptus grandis HOM05D007152 ORTHO05D008912 4.2e-11 72.4 69 58.0
SGA_v2.0_scaffold18G08363 Striga asiatica HOM05D007152 ORTHO05D008912 7.1e-11 71.6 59 61.0
A05p41300 Brassica napus HOM05D007152 ORTHO05D008912 2.1e-10 70.1 204 37.3
BraA05t22853Z Brassica rapa HOM05D007152 ORTHO05D008912 2.1e-10 70.1 204 37.3
RcHm_v2.0_Chr7g0221621 Rosa chinensis HOM05D007152 ORTHO05D008912 2.7e-10 69.7 50 64.0
BraA01t04415Z Brassica rapa HOM05D007152 ORTHO05D008912 3.5e-10 69.3 200 34.0
TPR.G22774 Trifolium pratense HOM05D007152 ORTHO05D008912 4.6e-10 68.9 66 54.5
C03p42450 Brassica napus HOM05D007152 ORTHO05D008912 1.0e-09 67.8 183 35.0
HanXRQChr07g0199211 Helianthus annuus HOM05D007152 ORTHO05D008912 2.3e-09 66.6 190 40.0
PSO407G0318 Papaver somniferum HOM05D007152 ORTHO05D008912 5.1e-09 65.5 49 63.3
Dinv28193 Davidia involucrata HOM05D007152 ORTHO05D008912 4.8e-07 58.9 30 80.0


User provided reference genes

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