Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046948 Camellia sinensis var. sinensis HOM05D018231 ORTHO05D010439 3.7e-40 167.9 96 100.0
CSS0003493 Camellia sinensis var. sinensis HOM05D018231 ORTHO05D010439 1.0e-34 149.8 96 84.4
CSS0005375 Camellia sinensis var. sinensis HOM05D018231 ORTHO05D010439 3.2e-31 138.3 96 80.2
CSS0010853 Camellia sinensis var. sinensis HOM05D018231 ORTHO05D010439 3.2e-31 138.3 96 80.2
CSS0012144 Camellia sinensis var. sinensis HOM05D018231 ORTHO05D010439 3.2e-31 138.3 96 80.2
Nn8g39368 Nelumbo nucifera HOM05D003010 ORTHO05D010439 2.4e-10 68.9 97 52.6
Rhsim01G0078400 Rhododendron simsii HOM05D003010 ORTHO05D010439 5.2e-10 67.8 100 50.0
Cc06_g08930 Coffea canephora HOM05D018231 ORTHO05D010439 4.4e-09 64.7 94 44.7
DCAR_009212 Daucus carota HOM05D000639 ORTHO05D005966 7.6e-09 63.9 96 47.9
Atru.chr7.1234 Acer truncatum HOM05D009305 ORTHO05D010439 2.2e-08 62.4 102 45.1
TAR625G0712 Trochodendron aralioides HOM05D003010 ORTHO05D010439 3.8e-08 61.6 92 45.7
Manes.11G101800 Manihot esculenta HOM05D009305 ORTHO05D010439 6.4e-08 60.8 96 45.8
Cfa003337 Carpinus fangiana HOM05D003010 ORTHO05D010439 8.4e-08 60.5 99 48.5
Haze_25626 Corylus avellana HOM05D003010 ORTHO05D010439 8.4e-08 60.5 99 46.5
Ciclev10010147m.g Citrus clementina HOM05D003010 ORTHO05D010439 1.4e-07 59.7 96 45.8
HanXRQChr08g0229131 Helianthus annuus HOM05D003010 ORTHO05D003623 2.4e-07 58.9 95 45.3
QL02p087437 Quercus lobata HOM05D009305 ORTHO05D010439 3.2e-07 58.5 95 46.3
Aqoxy7G02055 Aquilegia oxysepala HOM05D003010 ORTHO05D003623 5.4e-07 57.8 93 43.0
CiPaw.04G169500 Carya illinoinensis HOM05D009305 ORTHO05D010439 5.4e-07 57.8 93 45.2
Duzib205G1418 Durio zibethinus HOM05D003010 ORTHO05D003623 1.6e-06 56.2 99 37.4
CAN.G761.23 Capsicum annuum HOM05D003010 ORTHO05D003623 3.5e-06 55.1 98 37.8
HanXRQChr10g0316761 Helianthus annuus HOM05D003010 ORTHO05D003623 3.5e-06 55.1 96 42.7
Cpa.g.sc13.241 Carica papaya HOM05D003010 ORTHO05D003623 4.6e-06 54.7 92 39.1
Prupe.7G238200 Prunus persica HOM05D009305 ORTHO05D010439 4.6e-06 54.7 100 42.0
Gohir.A08G165900 Gossypium hirsutum HOM05D003010 ORTHO05D003623 7.8e-06 53.9 99 37.4
Potri.008G015800 Populus trichocarpa HOM05D003010 ORTHO05D010439 7.8e-06 53.9 91 39.6
Thecc.09G121000 Theobroma cacao HOM05D029830 ORTHO05D010439 7.8e-06 53.9 98 41.8


User provided reference genes

Program Settings