Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046866 Camellia sinensis var. sinensis HOM05D006168 ORTHO05D007602 1.1e-54 216.9 155 100.0
Dinv03501 Davidia involucrata HOM05D006168 ORTHO05D007602 2.2e-42 176.0 99 88.9
Dinv03506 Davidia involucrata HOM05D006168 ORTHO05D007602 2.2e-42 176.0 99 88.9
GSVIVG01024249001 Vitis vinifera HOM05D006168 ORTHO05D007602 6.0e-40 167.9 97 86.6
Peaxi162Scf00643g00537 Petunia axillaris HOM05D006168 ORTHO05D007602 7.8e-40 167.5 97 83.5
Lsat_1_v5_gn_2_6441 Lactuca sativa HOM05D006168 ORTHO05D007602 2.3e-39 166.0 97 85.6
HanXRQChr14g0428251 Helianthus annuus HOM05D006168 ORTHO05D007602 3.0e-39 165.6 95 87.4
ECA238G2000 Erigeron canadensis HOM05D006168 ORTHO05D007602 1.1e-38 163.7 100 81.0
CiPaw.16G075600 Carya illinoinensis HOM05D006168 ORTHO05D007602 2.5e-38 162.5 97 83.5
Rhsim12G0137000 Rhododendron simsii HOM05D006168 ORTHO05D007602 2.5e-38 162.5 87 92.0
Sabra04G0045100 Salix brachista HOM05D006168 ORTHO05D007602 2.5e-38 162.5 96 84.4
Gohir.D05G295400 Gossypium hirsutum HOM05D006168 ORTHO05D007602 3.3e-38 162.2 97 83.5
Gohir.A05G294800 Gossypium hirsutum HOM05D006168 ORTHO05D007602 5.6e-38 161.4 97 83.5
CANSAT35G1332 Cannabis sativa HOM05D006168 ORTHO05D007602 7.3e-38 161.0 96 83.3
MELO3C002180.2 Cucumis melo HOM05D006168 ORTHO05D007602 7.3e-38 161.0 96 84.4
Potri.004G067300 Populus trichocarpa HOM05D006168 ORTHO05D007602 1.6e-37 159.8 96 82.3
CsaV3_1G007610 Cucumis sativus L. HOM05D006168 ORTHO05D007602 2.1e-37 159.5 96 84.4
Duzib114G0883 Durio zibethinus HOM05D006168 ORTHO05D007602 2.1e-37 159.5 94 83.0
Duzib128G1786 Durio zibethinus HOM05D006168 ORTHO05D007602 3.6e-37 158.7 97 79.4
ClCG01G014720 Citrullus lanatus HOM05D006168 ORTHO05D007602 6.2e-37 157.9 96 83.3
Thecc.10G078900 Theobroma cacao HOM05D006168 ORTHO05D007602 6.2e-37 157.9 96 82.3
COL.COLO4_12167 Corchorus olitorius HOM05D006168 ORTHO05D007602 1.4e-36 156.8 97 81.4
Prupe.5G244900 Prunus persica HOM05D006168 ORTHO05D007602 1.4e-36 156.8 104 77.9
Cc02_g29290 Coffea canephora HOM05D006168 ORTHO05D007602 1.8e-36 156.4 96 80.2
Nn3g18550 Nelumbo nucifera HOM05D006168 ORTHO05D007602 2.4e-36 156.0 98 81.6
Manes.02G226600 Manihot esculenta HOM05D006168 ORTHO05D007602 3.1e-36 155.6 96 80.2
vmacro16399 Vaccinium macrocarpon HOM05D006168 ORTHO05D007602 3.1e-36 155.6 82 92.7
Solyc06g072170.2 Solanum lycopersicum HOM05D006168 ORTHO05D007602 4.0e-36 155.2 97 79.4
Sopen06g028470 Solanum pennellii HOM05D006168 ORTHO05D007602 4.0e-36 155.2 97 79.4
CAN.G65.65 Capsicum annuum HOM05D006168 ORTHO05D007602 5.3e-36 154.8 95 77.9
DCAR_011406 Daucus carota HOM05D006168 ORTHO05D007602 5.3e-36 154.8 85 88.2
PGSC0003DMG400027059 Solanum tuberosum HOM05D006168 ORTHO05D007602 5.3e-36 154.8 97 78.4
Atru.chr9.17 Acer truncatum HOM05D006168 ORTHO05D007602 1.2e-35 153.7 90 85.6
Sed0019180 Sechium edule HOM05D006168 ORTHO05D007602 1.2e-35 153.7 96 82.3
Aqoxy2G03978 Aquilegia oxysepala HOM05D006168 ORTHO05D007602 1.5e-35 153.3 97 80.4
Hund08905 Selenicereus undatus HOM05D006168 ORTHO05D007602 3.4e-35 152.1 101 75.2
EL10Ac8g18962 Beta vulgaris HOM05D006168 ORTHO05D007602 7.6e-35 151.0 98 77.6
PGR083G1429 Punica granatum HOM05D006168 ORTHO05D007602 9.9e-35 150.6 95 78.9
Gorai.009G312100 Gossypium raimondii HOM05D006168 ORTHO05D007602 1.3e-34 150.2 91 82.4
ECA238G2968 Erigeron canadensis HOM05D000092 ORTHO05D000042 2.2e-34 149.4 85 84.7
Medtr1g077570 Medicago truncatula HOM05D006168 ORTHO05D007602 2.9e-34 149.1 96 81.2
TWI81G0790 Tripterygium wilfordii HOM05D006168 ORTHO05D007602 2.9e-34 149.1 96 79.2
Ah.14g084700 Amaranthus hybridus HOM05D006168 ORTHO05D007602 3.8e-34 148.7 98 77.6
BolC3t16418H Brassica oleracea HOM05D006168 ORTHO05D007602 4.9e-34 148.3 96 77.1
BraA03t12572Z Brassica rapa HOM05D006168 ORTHO05D007602 6.4e-34 147.9 96 77.1
Lalb_Chr21g0311691 Lupinus albus HOM05D006168 ORTHO05D007602 6.4e-34 147.9 98 76.5
MSTRG.4316 Avicennia marina HOM05D006168 ORTHO05D007602 8.4e-34 147.5 91 81.3
ECA238G0114 Erigeron canadensis HOM05D006168 ORTHO05D007602 8.4e-34 147.5 89 80.9
ECA238G1897 Erigeron canadensis HOM05D006168 ORTHO05D007602 8.4e-34 147.5 89 80.9
THA.LOC104818656 Tarenaya hassleriana HOM05D006168 ORTHO05D007602 8.4e-34 147.5 97 81.4
Cfa017805 Carpinus fangiana HOM05D006168 ORTHO05D007602 1.1e-33 147.1 87 82.8
Lj5g0014337 Lotus japonicus HOM05D006168 ORTHO05D007602 1.4e-33 146.7 96 76.0
CDE04G1298 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 3.2e-33 145.6 99 76.8
AUR62028326 Chenopodium quinoa HOM05D006168 ORTHO05D007602 3.2e-33 145.6 100 74.0
Glyma.10G174000 Glycine max HOM05D006168 ORTHO05D007602 4.2e-33 145.2 91 81.3
TAR629G1867 Trochodendron aralioides HOM05D006168 ORTHO05D007602 4.2e-33 145.2 94 77.7
Ciclev10022597m.g Citrus clementina HOM05D006168 ORTHO05D007602 5.4e-33 144.8 96 76.0
QL10p033704 Quercus lobata HOM05D006168 ORTHO05D007602 5.4e-33 144.8 86 80.2
CDE08G0644 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 7.1e-33 144.4 101 77.2
Migut.D02066 Erythranthe guttata HOM05D006168 ORTHO05D007602 9.3e-33 144.1 95 74.7
Haze_18408 Corylus avellana HOM05D006168 ORTHO05D007602 1.2e-32 143.7 94 76.6
MBI06_g12548_MAGBIO Magnolia biondii HOM05D006168 ORTHO05D007602 1.2e-32 143.7 97 76.3
Glyma.20G216400 Glycine max HOM05D006168 ORTHO05D007602 1.6e-32 143.3 91 80.2
Eucgr.H00657 Eucalyptus grandis HOM05D006168 ORTHO05D007602 3.5e-32 142.1 93 76.3
RcHm_v2.0_Chr7g0176961 Rosa chinensis HOM05D006168 ORTHO05D007602 3.5e-32 142.1 103 72.8
Ca_09928_v3 Cicer arietinum L. HOM05D006168 ORTHO05D007602 4.6e-32 141.7 94 78.7
FvH4_5g18550 Fragaria vesca HOM05D006168 ORTHO05D007602 4.6e-32 141.7 97 76.3
FAN04G0186 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.6e-32 141.7 97 76.3
FAN18G0639 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.6e-32 141.7 97 76.3
Psat6g054520 Pisum sativum HOM05D006168 ORTHO05D007602 4.6e-32 141.7 96 77.1
HPP92_020852 Vanilla planifolia HOM05D006168 ORTHO05D007602 4.6e-32 141.7 91 79.1
PSO063G5228 Papaver somniferum HOM05D006168 ORTHO05D007602 6.0e-32 141.4 97 74.2
Phvul.L006301 Phaseolus vulgaris HOM05D006168 ORTHO05D007602 1.0e-31 140.6 90 77.8
CARHR079400 Cardamine hirsuta HOM05D006168 ORTHO05D007602 1.8e-31 139.8 96 71.9
VMungo0720G1915 Vigna mungo HOM05D006168 ORTHO05D007602 3.9e-31 138.7 90 76.7
SGA_v2.0_scaffold387G50509 Striga asiatica HOM05D006168 ORTHO05D007602 5.1e-31 138.3 93 74.2
FAN08G3581 Fragaria x ananassa HOM05D006168 ORTHO05D007602 6.7e-31 137.9 96 75.0
AUR62025335 Chenopodium quinoa HOM05D006168 ORTHO05D007602 1.1e-30 137.1 87 78.2
Aa31LG5G15370 Aethionema arabicum HOM05D006168 ORTHO05D007602 1.9e-30 136.3 96 72.9
Sp3g03900 Schrenkiella parvula HOM05D006168 ORTHO05D007602 1.9e-30 136.3 96 70.8
MD06G1240400 Malus domestica HOM05D006168 ORTHO05D007602 3.3e-30 135.6 94 73.4
unitig_21.g20432 Utricularia gibba HOM05D006168 ORTHO05D007602 3.3e-30 135.6 90 74.4
ATR0124G011 Amborella trichopoda HOM05D006168 ORTHO05D007602 7.4e-30 134.4 91 74.7
MD14G1246600 Malus domestica HOM05D006168 ORTHO05D007602 3.7e-29 132.1 94 72.3
Nitab4.5_0000477g0160 Nicotiana tabacum HOM05D006168 ORTHO05D007602 1.4e-28 130.2 86 75.6
AL3G15460 Arabidopsis lyrata HOM05D006168 ORTHO05D007602 1.8e-28 129.8 96 68.8
Thhalv10021722m.g Eutrema salsugineum HOM05D006168 ORTHO05D007602 4.0e-28 128.6 90 71.1
SEGI_05677 Sequoiadendron giganteum HOM05D006168 ORTHO05D007602 9.0e-28 127.5 96 66.7
Nitab4.5_0002771g0020 Nicotiana tabacum HOM05D006168 ORTHO05D007602 1.2e-27 127.1 84 75.0
AT3G05070 Arabidopsis thaliana HOM05D006168 ORTHO05D007602 1.0e-26 124.0 96 66.7
C05p62160 Brassica napus HOM05D006168 ORTHO05D007602 1.0e-26 124.0 96 66.7
BolC5t34874H Brassica oleracea HOM05D006168 ORTHO05D007602 1.0e-26 124.0 96 66.7
A05p42500 Brassica napus HOM05D006168 ORTHO05D007602 2.9e-26 122.5 96 65.6
BraA05t23002Z Brassica rapa HOM05D006168 ORTHO05D007602 2.9e-26 122.5 96 65.6
Carub.0003s0432 Capsella rubella HOM05D006168 ORTHO05D007602 6.5e-26 121.3 96 63.5
Oeu034422.1 Olea europaea HOM05D006168 ORTHO05D007602 1.4e-25 120.2 81 75.3
Pp3c19_22150 Physcomitrium patens HOM05D006168 ORTHO05D007602 4.6e-24 115.2 91 64.8
AagrBONN_evm.TU.Sc2ySwM_368.389 Anthoceros agrestis HOM05D006168 ORTHO05D007602 7.9e-24 114.4 91 63.7
Os06g0730800 Oryza sativa ssp. japonica HOM05D006168 ORTHO05D007602 1.0e-23 114.0 91 61.5
Zm00001eb228960 Zea mays HOM05D006168 ORTHO05D007602 1.0e-23 114.0 91 62.6
BcaB04g19282 Brassica carinata HOM05D006168 ORTHO05D007602 1.8e-23 113.2 82 73.2
BcaC05g29992 Brassica carinata HOM05D006168 ORTHO05D007602 4.3e-22 108.6 96 58.3
Potri.017G154100 Populus trichocarpa HOM05D006168 ORTHO05D007602 4.8e-21 105.1 90 64.4
SalBow8G4549 Salvia bowleyana HOM05D006168 ORTHO05D007602 4.8e-21 105.1 93 62.4
Sed0015845 Sechium edule HOM05D006168 ORTHO05D007602 6.2e-21 104.8 79 72.2
RcHm_v2.0_Chr5g0006211 Rosa chinensis HOM05D006168 ORTHO05D007602 3.1e-20 102.4 94 57.4
arahy.Tifrunner.gnm1.ann1.52MA05 Arachis hypogaea HOM05D006168 ORTHO05D007602 6.9e-20 101.3 82 63.4
Mapoly0133s0024 Marchantia polymorpha HOM05D006168 ORTHO05D007602 2.0e-19 99.8 85 58.8
SMO147G0110 Selaginella moellendorffii HOM05D006168 ORTHO05D007602 2.6e-19 99.4 79 63.3
CBR_g57849 Chara braunii HOM05D006168 ORTHO05D007602 2.5e-17 92.8 94 53.2
FAN21G2556 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.1e-16 89.7 93 57.0
FAN25G2877 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.7e-16 89.4 94 54.3
FvH4_3g03920 Fragaria vesca HOM05D006168 ORTHO05D007602 1.0e-15 87.4 91 51.6
FAN11G1802 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.0e-15 87.4 91 51.6
FAN16G2203 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.3e-15 87.0 94 51.1
TPR.G8871 Trifolium pratense HOM05D006168 ORTHO05D007602 3.0e-15 85.9 49 85.7
BcaC01g04336 Brassica carinata HOM05D006168 ORTHO05D007602 1.4e-12 77.0 47 76.6
Cre12.g518300 Chlamydomonas reinhardtii HOM05D006168 ORTHO05D007602 6.9e-12 74.7 87 48.3
arahy.Tifrunner.gnm1.ann1.S1M3RU Arachis hypogaea HOM05D006168 ORTHO05D007602 7.7e-11 71.2 57 57.9
Sc15g0000010 Simmondsia chinensis HOM05D006168 ORTHO05D007602 1.0e-10 70.9 47 74.5
FAN13G0455 Fragaria x ananassa HOM05D006168 ORTHO05D007602 3.2e-09 65.9 47 66.0
TPR.G35595 Trifolium pratense HOM05D006168 ORTHO05D007602 4.2e-09 65.5 47 68.1
MCO12G027 Micromonas commoda HOM05D006168 ORTHO05D007602 6.1e-08 61.6 86 40.7


User provided reference genes

Program Settings