Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046837 Camellia sinensis var. sinensis HOM05D000085 ORTHO05D018167 5.1e-124 448.0 262 100.0
CSS0035510 Camellia sinensis var. sinensis HOM05D000085 ORTHO05D001460 1.4e-97 360.1 271 84.9
GSVIVG01015198001 Vitis vinifera HOM05D000085 ORTHO05D001460 1.6e-37 160.6 317 38.8
Actinidia29904 Actinidia chinensis HOM05D000085 ORTHO05D001460 1.3e-26 124.4 296 45.3
vmacro06293 Vaccinium macrocarpon HOM05D000085 ORTHO05D001460 3.5e-24 116.3 360 37.8
CSS0043178 Camellia sinensis var. sinensis HOM05D000085 ORTHO05D001460 1.1e-22 111.3 389 31.9
TAR624G1145 Trochodendron aralioides HOM05D000085 ORTHO05D001460 1.3e-15 87.8 201 37.3
TAR636G0560 Trochodendron aralioides HOM05D000085 ORTHO05D001460 9.0e-12 75.1 303 32.0
Haze_25916 Corylus avellana HOM05D005251 ORTHO05D006680 1.5e-11 74.3 125 47.2
Rhsim03G0232000 Rhododendron simsii HOM05D000085 ORTHO05D001460 3.4e-11 73.2 98 53.1
TAR383G0447 Trochodendron aralioides HOM05D000085 ORTHO05D001460 4.9e-10 69.3 126 43.7
Actinidia19137 Actinidia chinensis HOM05D000085 ORTHO05D001460 8.4e-10 68.6 86 54.7
FAN23G0628 Fragaria x ananassa HOM05D000085 ORTHO05D001460 3.2e-09 66.6 244 30.7
Actinidia38445 Actinidia chinensis HOM05D000085 ORTHO05D018167 7.1e-09 65.5 74 56.8
CsaV3_1G040470 Cucumis sativus L. HOM05D000085 ORTHO05D001460 1.6e-08 64.3 309 28.8
Sabra06G0120300 Salix brachista HOM05D000085 ORTHO05D001460 2.7e-08 63.5 246 32.1
Prupe.7G209300 Prunus persica HOM05D000085 ORTHO05D001460 7.8e-08 62.0 72 51.4
FAN28G1764 Fragaria x ananassa HOM05D000085 ORTHO05D001460 5.1e-07 59.3 246 30.5
Lj7A676T39 Lonicera japonica HOM05D000085 ORTHO05D001460 5.1e-07 59.3 68 51.5
Cfa003081 Carpinus fangiana HOM05D000085 ORTHO05D001460 1.1e-06 58.2 125 44.0
FvH4_1g07530 Fragaria vesca HOM05D000085 ORTHO05D001460 1.5e-06 57.8 213 31.9
Medtr2g039290 Medicago truncatula HOM05D000085 ORTHO05D001460 1.9e-06 57.4 170 31.2
Nitab4.5_0006552g0020 Nicotiana tabacum HOM05D000085 ORTHO05D001460 1.9e-06 57.4 139 34.5
ClCG03G015570 Citrullus lanatus HOM05D000085 ORTHO05D001460 3.3e-06 56.6 338 26.9
Oeu041224.1 Olea europaea HOM05D019999 ORTHO05D018167 5.6e-06 55.8 127 38.6
Psat1g141200 Pisum sativum HOM05D000085 ORTHO05D001460 5.6e-06 55.8 119 38.7
Glyma.15G170000 Glycine max HOM05D000085 ORTHO05D001460 7.3e-06 55.5 80 46.2


User provided reference genes

Program Settings