Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046795 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 8.8e-108 393.7 203 100.0
CSS0004605 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 3.4e-107 391.7 203 99.5
CSS0005556 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.0e-105 384.0 205 97.6
CSS0033649 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 3.4e-99 365.2 203 94.1
CSS0023584 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 1.2e-96 356.7 198 93.4
CSS0039680 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 1.0e-92 343.6 203 89.7
CSS0014156 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 2.2e-82 309.3 189 86.8
CSS0010984 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 4.3e-78 295.0 203 79.3
CSS0038307 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.1e-70 270.4 203 73.4
CSS0041790 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 1.6e-53 213.4 221 54.8
CSS0025555 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 2.3e-47 193.0 218 52.8
CSS0030058 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.9e-26 122.9 236 39.8
CSS0030897 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 1.1e-25 120.9 166 45.8
CSS0007143 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 3.3e-22 109.4 116 52.6
QL03p030360 Quercus lobata HOM05D000045 ORTHO05D000067 4.2e-17 92.4 167 38.9
CSS0047537 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 8.8e-15 84.7 149 38.9
QL05p086352 Quercus lobata HOM05D000045 ORTHO05D000067 1.3e-13 80.9 88 50.0
vmacro17252 Vaccinium macrocarpon HOM05D000045 ORTHO05D009940 1.5e-11 73.9 192 34.9
CSS0004826 Camellia sinensis var. sinensis HOM05D057373 ORTHO05D012494 1.3e-10 70.9 188 33.0
CSS0044320 Camellia sinensis var. sinensis HOM05D057373 ORTHO05D012494 1.4e-09 67.4 176 35.8
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 2.5e-09 66.6 98 41.8
vmacro03885 Vaccinium macrocarpon HOM05D011242 ORTHO05D012494 5.5e-09 65.5 129 37.2
vmacro19402 Vaccinium macrocarpon HOM05D011242 ORTHO05D012494 1.6e-08 63.9 140 35.7
Aqoxy6G02399 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 2.7e-08 63.2 101 42.6
Hma1.2p1_3064F.1_g332250 Hydrangea macrophylla HOM05D000045 ORTHO05D009940 2.7e-08 63.2 146 33.6
Hma1.2p1_0002F.1_g002660 Hydrangea macrophylla HOM05D000045 ORTHO05D012494 3.6e-08 62.8 108 39.8
Atru.chr12.1768 Acer truncatum HOM05D000045 ORTHO05D009940 7.9e-08 61.6 109 38.5
Aqoxy7G01613 Aquilegia oxysepala HOM05D003219 ORTHO05D000067 1.8e-07 60.5 101 42.6
Aqoxy5G02938 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 3.9e-07 59.3 101 41.6
TAR371G0903 Trochodendron aralioides HOM05D000045 ORTHO05D000067 4.4e-06 55.8 151 30.5
vmacro17071 Vaccinium macrocarpon HOM05D011242 ORTHO05D012494 4.4e-06 55.8 101 42.6
vmacro09617 Vaccinium macrocarpon HOM05D011242 ORTHO05D012494 5.7e-06 55.5 138 34.8


User provided reference genes

Program Settings