Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046759 Camellia sinensis var. sinensis HOM05D007311 ORTHO05D009011 9.6e-59 229.9 116 100.0
Prupe.5G015700 Prunus persica HOM05D007311 ORTHO05D009011 3.8e-47 191.4 111 86.5
QL12p002522 Quercus lobata HOM05D007311 ORTHO05D009011 1.1e-46 189.9 110 85.5
CiPaw.11G077300 Carya illinoinensis HOM05D007311 ORTHO05D009011 2.5e-46 188.7 111 85.6
GSVIVG01036913001 Vitis vinifera HOM05D007311 ORTHO05D009011 3.6e-45 184.9 111 83.8
Manes.15G187600 Manihot esculenta HOM05D007311 ORTHO05D009011 4.6e-45 184.5 111 82.9
MD16G1286900 Malus domestica HOM05D007311 ORTHO05D009011 2.3e-44 182.2 111 82.9
RcHm_v2.0_Chr7g0214961 Rosa chinensis HOM05D007311 ORTHO05D009011 3.0e-44 181.8 111 82.0
Cc01_g03300 Coffea canephora HOM05D007311 ORTHO05D009011 3.9e-44 181.4 111 82.0
DCAR_030948 Daucus carota HOM05D007311 ORTHO05D009011 6.7e-44 180.6 111 82.9
Glyma.19G247100 Glycine max HOM05D007311 ORTHO05D009011 8.8e-44 180.3 111 81.1
Nn3g18546 Nelumbo nucifera HOM05D007311 ORTHO05D009011 8.8e-44 180.3 111 79.3
Lalb_Chr15g0076111 Lupinus albus HOM05D007311 ORTHO05D009011 1.1e-43 179.9 111 80.2
Hma1.2p1_0294F.1_g116450 Hydrangea macrophylla HOM05D007311 ORTHO05D009011 4.3e-43 177.9 108 82.4
Dinv37446 Davidia involucrata HOM05D007311 ORTHO05D009011 5.7e-43 177.6 104 83.7
Lj1g0003439 Lotus japonicus HOM05D007311 ORTHO05D009011 5.7e-43 177.6 111 78.4
Haze_08033 Corylus avellana HOM05D007311 ORTHO05D009011 7.4e-43 177.2 102 86.3
Duzib205G2009 Durio zibethinus HOM05D007311 ORTHO05D009011 7.4e-43 177.2 113 77.9
TWI32G0505 Tripterygium wilfordii HOM05D007311 ORTHO05D009011 7.4e-43 177.2 111 78.4
Glyma.03G249600 Glycine max HOM05D007311 ORTHO05D009011 9.7e-43 176.8 111 77.5
FAN18G0784 Fragaria x ananassa HOM05D007311 ORTHO05D009011 1.3e-42 176.4 111 80.2
Gohir.D08G169100 Gossypium hirsutum HOM05D007311 ORTHO05D009011 1.7e-42 176.0 113 77.9
QL12p002612 Quercus lobata HOM05D007311 ORTHO05D009011 1.7e-42 176.0 105 82.9
Peaxi162Scf00330g01216 Petunia axillaris HOM05D007311 ORTHO05D009011 2.8e-42 175.3 109 75.2
COL.COLO4_16729 Corchorus olitorius HOM05D007311 ORTHO05D009011 4.8e-42 174.5 113 77.0
FvH4_5g24490 Fragaria vesca HOM05D007311 ORTHO05D009011 4.8e-42 174.5 111 79.3
Oeu031947.3 Olea europaea HOM05D007311 ORTHO05D009011 6.3e-42 174.1 109 78.9
Potri.003G106700 Populus trichocarpa HOM05D007311 ORTHO05D009011 8.2e-42 173.7 111 80.2
Aqoxy102s011 Aquilegia oxysepala HOM05D007311 ORTHO05D009011 1.1e-41 173.3 111 74.8
Aqoxy2G03516 Aquilegia oxysepala HOM05D007311 ORTHO05D009011 1.1e-41 173.3 111 74.8
Nitab4.5_0007008g0080 Nicotiana tabacum HOM05D007311 ORTHO05D009011 1.1e-41 173.3 109 75.2
arahy.Tifrunner.gnm1.ann1.C28JQA Arachis hypogaea HOM05D007311 ORTHO05D009011 1.4e-41 172.9 111 75.7
arahy.Tifrunner.gnm1.ann1.M0M2WX Arachis hypogaea HOM05D007311 ORTHO05D009011 1.4e-41 172.9 111 75.7
Sabra03G0073500 Salix brachista HOM05D007311 ORTHO05D009011 1.4e-41 172.9 111 78.4
Gorai.004G176300 Gossypium raimondii HOM05D007311 ORTHO05D009011 1.8e-41 172.6 113 77.9
Nitab4.5_0000623g0080 Nicotiana tabacum HOM05D007311 ORTHO05D009011 1.8e-41 172.6 109 74.3
Phvul.006G104200 Phaseolus vulgaris HOM05D007311 ORTHO05D009011 1.8e-41 172.6 111 76.6
FAN08G0573 Fragaria x ananassa HOM05D007311 ORTHO05D009011 5.3e-41 171.0 107 80.4
PGR031G0344 Punica granatum HOM05D007311 ORTHO05D009011 5.3e-41 171.0 111 73.0
Ciclev10002031m.g Citrus clementina HOM05D007311 ORTHO05D009011 6.9e-41 170.6 111 73.9
VMungo0540G0453 Vigna mungo HOM05D007311 ORTHO05D009011 6.9e-41 170.6 111 75.7
Gohir.A08G147900 Gossypium hirsutum HOM05D007311 ORTHO05D009011 9.1e-41 170.2 111 77.5
ClCG07G011190 Citrullus lanatus HOM05D000351 ORTHO05D000250 1.2e-40 169.9 111 73.9
MBI03_g29283_MAGBIO Magnolia biondii HOM05D006174 ORTHO05D007987 1.2e-40 169.9 111 73.0
Migut.E01383 Erythranthe guttata HOM05D007311 ORTHO05D009011 1.5e-40 169.5 111 75.7
TAR629G0827 Trochodendron aralioides HOM05D007311 ORTHO05D009011 1.5e-40 169.5 111 75.7
CAN.G22.34 Capsicum annuum HOM05D007311 ORTHO05D009011 2.6e-40 168.7 109 74.3
Eucgr.E01832 Eucalyptus grandis HOM05D007311 ORTHO05D009011 3.4e-40 168.3 111 74.8
MELO3C016211.2 Cucumis melo HOM05D007311 ORTHO05D009011 7.7e-40 167.2 111 73.0
Sed0011898 Sechium edule HOM05D000351 ORTHO05D000250 7.7e-40 167.2 108 74.1
vmacro22112 Vaccinium macrocarpon HOM05D007311 ORTHO05D009011 7.7e-40 167.2 134 68.7
Solyc08g075070.3 Solanum lycopersicum HOM05D007311 ORTHO05D009011 1.7e-39 166.0 109 73.4
THA.LOC104811225 Tarenaya hassleriana HOM05D007311 ORTHO05D009011 1.7e-39 166.0 111 71.2
CsaV3_4G007060 Cucumis sativus L. HOM05D007311 ORTHO05D009011 2.2e-39 165.6 111 72.1
MSTRG.1753 Avicennia marina HOM05D007311 ORTHO05D009011 3.8e-39 164.9 111 73.0
BraA01t01079Z Brassica rapa HOM05D007311 ORTHO05D009011 3.8e-39 164.9 111 70.3
Aa31LG6G2000 Aethionema arabicum HOM05D007311 ORTHO05D009011 5.0e-39 164.5 111 73.9
HanXRQChr07g0198461 Helianthus annuus HOM05D007311 ORTHO05D009011 5.0e-39 164.5 111 72.1
Thecc.03G322100 Theobroma cacao HOM05D007311 ORTHO05D009011 5.0e-39 164.5 119 73.9
A01p11360 Brassica napus HOM05D000351 ORTHO05D009011 8.5e-39 163.7 111 69.4
Psat0s3161g0160 Pisum sativum HOM05D007311 ORTHO05D009011 8.5e-39 163.7 111 75.7
Cfa012633 Carpinus fangiana HOM05D007311 ORTHO05D009011 1.1e-38 163.3 99 83.8
BcaC09g51414 Brassica carinata HOM05D007311 ORTHO05D009011 1.4e-38 162.9 111 70.3
TPR.G7011 Trifolium pratense HOM05D007311 ORTHO05D009011 1.4e-38 162.9 111 73.0
AUR62039076 Chenopodium quinoa HOM05D007311 ORTHO05D009011 1.9e-38 162.5 111 72.1
Thhalv10024796m.g Eutrema salsugineum HOM05D000351 ORTHO05D009011 2.5e-38 162.2 111 70.3
Medtr7g115450 Medicago truncatula HOM05D007311 ORTHO05D009011 4.2e-38 161.4 111 73.0
Medtr7g115470 Medicago truncatula HOM05D007311 ORTHO05D009011 4.2e-38 161.4 111 73.0
Lsat_1_v5_gn_9_12020 Lactuca sativa HOM05D007311 ORTHO05D009011 5.5e-38 161.0 111 73.9
SalBow3G0367 Salvia bowleyana HOM05D007311 ORTHO05D009011 5.5e-38 161.0 109 72.5
C01p13360 Brassica napus HOM05D007311 ORTHO05D009011 7.2e-38 160.6 111 69.4
Sp7g18020 Schrenkiella parvula HOM05D007311 ORTHO05D009011 9.4e-38 160.2 111 69.4
EL10Ac9g22274 Beta vulgaris HOM05D007311 ORTHO05D009011 1.2e-37 159.8 111 71.2
CARHR226190 Cardamine hirsuta HOM05D007311 ORTHO05D009011 1.2e-37 159.8 111 69.4
Ca_09529_v3 Cicer arietinum L. HOM05D007311 ORTHO05D009011 1.2e-37 159.8 111 73.0
CANSAT35G1819 Cannabis sativa HOM05D000351 ORTHO05D000250 3.6e-37 158.3 111 72.1
Carub.0007s2183 Capsella rubella HOM05D007311 ORTHO05D009011 4.7e-37 157.9 111 66.7
ECA233G4235 Erigeron canadensis HOM05D007311 ORTHO05D009011 4.7e-37 157.9 111 71.2
BcaNung01781 Brassica carinata HOM05D007311 ORTHO05D009011 6.1e-37 157.5 111 67.6
AT4G19400 Arabidopsis thaliana HOM05D007311 ORTHO05D009011 7.9e-37 157.1 111 67.6
AT4G19410 Arabidopsis thaliana HOM05D000351 ORTHO05D009011 7.9e-37 157.1 111 67.6
SGA_v2.0_scaffold144G35891 Striga asiatica HOM05D007311 ORTHO05D009011 3.9e-36 154.8 131 63.4
Hund06317 Selenicereus undatus HOM05D007311 ORTHO05D009011 6.7e-36 154.1 111 67.6
AL7G34740 Arabidopsis lyrata HOM05D007311 ORTHO05D009011 1.5e-35 152.9 111 64.9
PSO210G1792 Papaver somniferum HOM05D007311 ORTHO05D009011 7.4e-35 150.6 109 67.0
ATR0796G066 Amborella trichopoda HOM05D007311 ORTHO05D009011 9.7e-35 150.2 111 66.7
CDE11G0786 Ceratophyllum demersum HOM05D007311 ORTHO05D009011 2.2e-34 149.1 111 65.8
PSO238G0022 Papaver somniferum HOM05D007311 ORTHO05D009011 4.8e-34 147.9 109 66.1
PGSC0003DMG400020814 Solanum tuberosum HOM05D007311 ORTHO05D009011 4.8e-34 147.9 101 69.3
Ah.01g011070 Amaranthus hybridus HOM05D007311 ORTHO05D009011 8.2e-34 147.1 104 71.2
HPP92_005283 Vanilla planifolia HOM05D007311 ORTHO05D009011 2.4e-33 145.6 108 64.8
Sc18g0005580 Simmondsia chinensis HOM05D007311 ORTHO05D009011 5.3e-33 144.4 99 71.7
unitig_899.g14733 Utricularia gibba HOM05D007311 ORTHO05D009011 9.1e-33 143.7 112 65.2
Sopen08g023700 Solanum pennellii HOM05D007311 ORTHO05D009011 5.9e-32 141.0 94 71.3
AUR62010310 Chenopodium quinoa HOM05D007311 ORTHO05D009011 2.1e-29 132.5 83 77.1
Zm00001eb284430 Zea mays HOM05D007311 ORTHO05D009011 5.2e-28 127.9 109 55.0
Cpa.g.sc542.2 Carica papaya HOM05D007311 ORTHO05D009011 5.7e-27 124.4 87 72.4
SEGI_31752 Sequoiadendron giganteum HOM05D007311 ORTHO05D009011 7.7e-24 114.0 101 49.5
Eucgr.E01869 Eucalyptus grandis HOM05D007311 ORTHO05D009011 1.8e-20 102.8 66 72.7
BcaC02g07636 Brassica carinata HOM05D007311 ORTHO05D009011 1.2e-19 100.1 103 54.4
SalBow1G6002 Salvia bowleyana HOM05D007311 ORTHO05D009011 2.6e-19 99.0 64 75.0
SalBow8G5581 Salvia bowleyana HOM05D007311 ORTHO05D009011 5.7e-19 97.8 65 72.3
Os05g0241400 Oryza sativa ssp. japonica HOM05D007311 ORTHO05D009011 2.8e-18 95.5 83 54.2
TWI60G1527 Tripterygium wilfordii HOM05D007311 ORTHO05D009011 5.3e-17 91.3 111 47.7
Rhsim07G0141400 Rhododendron simsii HOM05D000351 ORTHO05D000250 8.5e-15 84.0 51 84.3
Medtr5g045430 Medicago truncatula HOM05D007311 ORTHO05D009011 3.6e-13 78.6 66 62.1
AagrBONN_evm.TU.Sc2ySwM_228.4293 Anthoceros agrestis HOM05D007311 ORTHO05D009011 8.0e-13 77.4 101 32.7
SMO139G0010 Selaginella moellendorffii HOM05D007311 ORTHO05D009011 3.7e-10 68.6 114 33.3
Eucgr.E01790 Eucalyptus grandis HOM05D007311 ORTHO05D009011 5.4e-09 64.7 44 72.7
Ca_12103_v3 Cicer arietinum L. HOM05D007311 ORTHO05D009011 9.1e-09 63.9 38 76.3
Medtr2g084355 Medicago truncatula HOM05D003237 ORTHO05D003631 2.3e-07 59.3 44 68.2
Mapoly0040s0015 Marchantia polymorpha HOM05D007311 ORTHO05D009011 3.8e-07 58.5 105 27.6


User provided reference genes

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