Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046736 Camellia sinensis var. sinensis HOM05D009257 ORTHO05D010622 1.3e-62 243.0 132 100.0
vmacro00417 Vaccinium macrocarpon HOM05D009257 ORTHO05D010622 2.2e-22 109.4 148 52.0
TAR630G0006 Trochodendron aralioides HOM05D009257 ORTHO05D010622 6.3e-22 107.8 124 58.9
Dinv05170 Davidia involucrata HOM05D009257 ORTHO05D010622 7.7e-20 100.9 135 54.1
Dinv07644 Davidia involucrata HOM05D009257 ORTHO05D010622 2.9e-19 99.0 131 56.5
TAR629G1655 Trochodendron aralioides HOM05D009257 ORTHO05D010622 3.6e-17 92.0 124 51.6
Aqoxy3G03825 Aquilegia oxysepala HOM05D009257 ORTHO05D010622 6.7e-16 87.8 123 52.0
Actinidia31972 Actinidia chinensis HOM05D009257 ORTHO05D010622 1.5e-15 86.7 127 50.4
Duzib251G0093 Durio zibethinus HOM05D009257 ORTHO05D010299 4.4e-15 85.1 137 51.8
DCAR_026775 Daucus carota HOM05D009525 ORTHO05D010622 5.7e-15 84.7 132 50.0
Duzib268G0344 Durio zibethinus HOM05D009257 ORTHO05D010299 5.7e-15 84.7 142 50.0
Oeu003389.1 Olea europaea HOM05D009525 ORTHO05D010622 2.4e-13 79.3 129 48.8
Oeu045864.1 Olea europaea HOM05D009525 ORTHO05D010622 2.4e-13 79.3 131 47.3
Lsat_1_v5_gn_8_43780 Lactuca sativa HOM05D009525 ORTHO05D010622 4.1e-13 78.6 126 45.2
Thecc.02G281400 Theobroma cacao HOM05D009257 ORTHO05D010299 4.1e-13 78.6 143 44.8
DCAR_023605 Daucus carota HOM05D009525 ORTHO05D010622 7.0e-13 77.8 125 46.4
Gohir.D02G144800 Gossypium hirsutum HOM05D009257 ORTHO05D010299 9.1e-13 77.4 141 48.9
Gorai.002G179300 Gossypium raimondii HOM05D009257 ORTHO05D010299 2.0e-12 76.3 130 52.3
Gohir.A03G121900 Gossypium hirsutum HOM05D009257 ORTHO05D010299 2.6e-12 75.9 141 46.8
Gorai.005G162200 Gossypium raimondii HOM05D009257 ORTHO05D010299 3.5e-12 75.5 141 51.8
Duzib248G0803 Durio zibethinus HOM05D009257 ORTHO05D010299 5.9e-12 74.7 141 50.4
Gohir.D01G145300 Gossypium hirsutum HOM05D009257 ORTHO05D010299 1.3e-11 73.6 130 51.5
TPR.G35414 Trifolium pratense HOM05D011582 ORTHO05D010299 6.5e-11 71.2 124 50.0
Haze_11006 Corylus avellana HOM05D012022 ORTHO05D013822 2.5e-10 69.3 60 60.0
Dinv14877 Davidia involucrata HOM05D010187 ORTHO05D011391 9.4e-10 67.4 119 42.0
Manes.15G127400 Manihot esculenta HOM05D009257 ORTHO05D010622 1.6e-09 66.6 124 48.4
Nn4g24157 Nelumbo nucifera HOM05D009257 ORTHO05D010622 3.6e-09 65.5 97 50.5
Nn4g24141 Nelumbo nucifera HOM05D032416 ORTHO05D010622 4.7e-09 65.1 138 40.6
Potri.010G113300 Populus trichocarpa HOM05D009257 ORTHO05D010622 1.0e-08 63.9 133 48.1
Gohir.D12G154200 Gossypium hirsutum HOM05D009257 ORTHO05D010299 1.4e-08 63.5 141 45.4
Gorai.008G166600 Gossypium raimondii HOM05D009257 ORTHO05D010299 1.4e-08 63.5 141 45.4
Nitab4.5_0001832g0070 Nicotiana tabacum HOM05D009525 ORTHO05D010622 1.4e-08 63.5 139 41.7
RcHm_v2.0_Chr4g0441251 Rosa chinensis HOM05D012022 ORTHO05D013822 1.8e-08 63.2 57 52.6
Manes.17G076800 Manihot esculenta HOM05D009257 ORTHO05D010622 2.3e-08 62.8 122 46.7
PSO478G0446 Papaver somniferum HOM05D009257 ORTHO05D010622 3.0e-08 62.4 146 44.5
Gohir.A12G150500 Gossypium hirsutum HOM05D009257 ORTHO05D010299 4.0e-08 62.0 141 45.4
Nitab4.5_0002523g0010 Nicotiana tabacum HOM05D009525 ORTHO05D010622 4.0e-08 62.0 138 39.1
Nn3g18217 Nelumbo nucifera HOM05D032416 ORTHO05D010622 5.2e-08 61.6 134 42.5
Peaxi162Scf00253g01317 Petunia axillaris HOM05D009525 ORTHO05D010622 6.7e-08 61.2 138 42.0
CiPaw.03G068700 Carya illinoinensis HOM05D010187 ORTHO05D011391 8.8e-08 60.8 139 38.1
Gohir.A01G152400 Gossypium hirsutum HOM05D009257 ORTHO05D010299 1.2e-07 60.5 130 46.2
EL10Ac6g14215 Beta vulgaris HOM05D000504 ORTHO05D010622 1.5e-07 60.1 114 40.4
ECA233G1414 Erigeron canadensis HOM05D009525 ORTHO05D010622 2.6e-07 59.3 136 40.4
PGSC0003DMG400030541 Solanum tuberosum HOM05D009525 ORTHO05D010622 4.4e-07 58.5 159 30.2
Sed0015271 Sechium edule HOM05D031424 ORTHO05D010622 5.7e-07 58.2 119 45.4
Lsat_1_v5_gn_4_14541 Lactuca sativa HOM05D009525 ORTHO05D010622 7.5e-07 57.8 142 40.8
Potri.008G129100 Populus trichocarpa HOM05D009257 ORTHO05D010622 7.5e-07 57.8 148 39.2
QL01p001752 Quercus lobata HOM05D012022 ORTHO05D013822 9.7e-07 57.4 46 54.3
VMungo0251G2113 Vigna mungo HOM05D011582 ORTHO05D010299 1.7e-06 56.6 137 43.8
MSTRG.2171 Avicennia marina HOM05D009525 ORTHO05D010622 2.2e-06 56.2 48 45.8
Glyma.07G165300 Glycine max HOM05D011582 ORTHO05D010299 2.2e-06 56.2 149 39.6
Medtr4g084970 Medicago truncatula HOM05D011582 ORTHO05D010299 2.2e-06 56.2 126 45.2
Glyma.07G216800 Glycine max HOM05D011582 ORTHO05D010299 2.8e-06 55.8 145 43.4
CiPaw.05G249600 Carya illinoinensis HOM05D012022 ORTHO05D013822 3.7e-06 55.5 57 49.1
Lsat_1_v5_gn_3_54740 Lactuca sativa HOM05D009525 ORTHO05D010622 3.7e-06 55.5 142 37.3
MELO3C005323.2 Cucumis melo HOM05D022403 ORTHO05D025077 4.8e-06 55.1 138 39.1
CsaV3_5G028600 Cucumis sativus L. HOM05D022403 ORTHO05D025077 6.3e-06 54.7 134 41.0
CAN.G1317.2 Capsicum annuum HOM05D009525 ORTHO05D010622 8.2e-06 54.3 148 35.1
ClCG01G006080 Citrullus lanatus HOM05D022403 ORTHO05D025077 8.2e-06 54.3 140 37.9


User provided reference genes

Program Settings