Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046732 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 6.5e-79 297.4 154 100.0
CSS0025826 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 2.8e-66 255.4 150 79.3
CiPaw.12G128400 Carya illinoinensis HOM05D006458 ORTHO05D008433 5.4e-65 251.1 154 78.6
Dinv22275 Davidia involucrata HOM05D006458 ORTHO05D008433 3.5e-64 248.4 154 78.6
Cfa020375 Carpinus fangiana HOM05D006458 ORTHO05D008433 5.9e-64 247.7 126 88.1
CAN.G416.46 Capsicum annuum HOM05D006458 ORTHO05D008433 1.0e-63 246.9 125 88.8
Manes.03G125000 Manihot esculenta HOM05D006458 ORTHO05D008433 2.3e-63 245.7 128 85.2
CANSAT11G2101 Cannabis sativa HOM05D006458 ORTHO05D008433 2.9e-63 245.4 126 88.1
arahy.Tifrunner.gnm1.ann1.717SVK Arachis hypogaea HOM05D006458 ORTHO05D008433 5.0e-63 244.6 126 87.3
Lj1A870G91 Lonicera japonica HOM05D006458 ORTHO05D008433 6.6e-63 244.2 126 85.7
MD11G1221600 Malus domestica HOM05D006458 ORTHO05D008433 6.6e-63 244.2 128 87.5
Prupe.4G210000 Prunus persica HOM05D006458 ORTHO05D008433 6.6e-63 244.2 154 75.3
QL08p011516 Quercus lobata HOM05D006458 ORTHO05D008433 6.6e-63 244.2 153 73.9
Cc05_g13560 Coffea canephora HOM05D006458 ORTHO05D008433 8.6e-63 243.8 154 74.0
Potri.011G137100 Populus trichocarpa HOM05D006458 ORTHO05D008433 8.6e-63 243.8 128 85.9
Solyc12g005150.2 Solanum lycopersicum HOM05D006458 ORTHO05D008433 8.6e-63 243.8 154 76.0
Hma1.2p1_0673F.1_g201190 Hydrangea macrophylla HOM05D006458 ORTHO05D008433 1.1e-62 243.4 126 88.1
PGSC0003DMG400001097 Solanum tuberosum HOM05D006458 ORTHO05D008433 1.5e-62 243.0 154 75.3
Actinidia05107 Actinidia chinensis HOM05D006458 ORTHO05D008433 1.9e-62 242.7 124 88.7
DCAR_010044 Daucus carota HOM05D006458 ORTHO05D008433 1.9e-62 242.7 126 84.9
arahy.Tifrunner.gnm1.ann1.JDXG8H Arachis hypogaea HOM05D006458 ORTHO05D008433 2.5e-62 242.3 125 87.2
Sopen12g001140 Solanum pennellii HOM05D006458 ORTHO05D008433 3.3e-62 241.9 154 75.3
MD03G1206100 Malus domestica HOM05D006458 ORTHO05D008433 4.2e-62 241.5 128 87.5
Phvul.006G040400 Phaseolus vulgaris HOM05D006458 ORTHO05D008433 4.2e-62 241.5 128 84.4
Ciclev10009738m.g Citrus clementina HOM05D006458 ORTHO05D008433 5.5e-62 241.1 125 87.2
Medtr3g051110 Medicago truncatula HOM05D006458 ORTHO05D008433 5.5e-62 241.1 128 84.4
Nitab4.5_0000749g0130 Nicotiana tabacum HOM05D006458 ORTHO05D008433 7.2e-62 240.7 154 74.7
Dinv40738 Davidia involucrata HOM05D000653 ORTHO05D008581 9.5e-62 240.4 145 78.6
Nitab4.5_0000653g0030 Nicotiana tabacum HOM05D006458 ORTHO05D008433 1.6e-61 239.6 154 73.4
Psat5g192520 Pisum sativum HOM05D006458 ORTHO05D008433 1.6e-61 239.6 124 84.7
GSVIVG01037612001 Vitis vinifera HOM05D006458 ORTHO05D008433 1.6e-61 239.6 125 84.0
Ca_14717_v3 Cicer arietinum L. HOM05D006458 ORTHO05D008433 2.1e-61 239.2 154 74.0
Lj6g0005932 Lotus japonicus HOM05D006458 ORTHO05D008433 2.1e-61 239.2 154 73.4
SGA_v2.0_scaffold7G03986 Striga asiatica HOM05D006458 ORTHO05D008433 2.1e-61 239.2 126 84.9
VMungo0540G0475 Vigna mungo HOM05D006458 ORTHO05D008433 2.1e-61 239.2 128 83.6
Glyma.08G314400 Glycine max HOM05D006458 ORTHO05D008433 2.8e-61 238.8 125 86.4
Hma1.2p1_1271F.1_g271730 Hydrangea macrophylla HOM05D006458 ORTHO05D008433 2.8e-61 238.8 128 83.6
Phvul.005G120100 Phaseolus vulgaris HOM05D006458 ORTHO05D008433 2.8e-61 238.8 127 83.5
Duzib170G0083 Durio zibethinus HOM05D006458 ORTHO05D008433 3.6e-61 238.4 128 82.0
Duzib170G1029 Durio zibethinus HOM05D006458 ORTHO05D008433 3.6e-61 238.4 128 82.0
Migut.M01780 Erythranthe guttata HOM05D006458 ORTHO05D008433 3.6e-61 238.4 124 87.1
Glyma.18G099800 Glycine max HOM05D006458 ORTHO05D008433 3.6e-61 238.4 125 85.6
Lalb_Chr15g0081001 Lupinus albus HOM05D006458 ORTHO05D008433 6.1e-61 237.7 126 84.9
Sed0021211 Sechium edule HOM05D006458 ORTHO05D008433 8.0e-61 237.3 128 82.0
Thecc.07G043100 Theobroma cacao HOM05D006458 ORTHO05D008433 8.0e-61 237.3 128 82.8
FvH4_3g22360 Fragaria vesca HOM05D006458 ORTHO05D008433 1.8e-60 236.1 128 82.8
FAN11G3779 Fragaria x ananassa HOM05D006458 ORTHO05D008433 1.8e-60 236.1 128 82.8
Gorai.013G160500 Gossypium raimondii HOM05D006458 ORTHO05D008433 1.8e-60 236.1 128 80.5
Nitab4.5_0004336g0030 Nicotiana tabacum HOM05D006458 ORTHO05D008433 1.8e-60 236.1 126 84.9
SalBow5G1944 Salvia bowleyana HOM05D006458 ORTHO05D008433 1.8e-60 236.1 126 83.3
CsaV3_3G005240 Cucumis sativus L. HOM05D006458 ORTHO05D008433 2.3e-60 235.7 128 82.0
Duzib170G0736 Durio zibethinus HOM05D006458 ORTHO05D008433 2.3e-60 235.7 128 81.2
ClCG10G005510 Citrullus lanatus HOM05D006458 ORTHO05D008433 4.0e-60 235.0 128 82.8
Lsat_1_v5_gn_7_109420 Lactuca sativa HOM05D006458 ORTHO05D008433 4.0e-60 235.0 123 84.6
Gohir.A13G138900 Gossypium hirsutum HOM05D006458 ORTHO05D008433 5.2e-60 234.6 128 79.7
HanXRQChr11g0336301 Helianthus annuus HOM05D006458 ORTHO05D008433 1.2e-59 233.4 126 81.7
Sabra16G0288000 Salix brachista HOM05D006458 ORTHO05D008433 1.2e-59 233.4 128 80.5
COL.COLO4_09642 Corchorus olitorius HOM05D000451 ORTHO05D008433 1.5e-59 233.0 126 82.5
Haze_09655 Corylus avellana HOM05D000653 ORTHO05D008581 1.5e-59 233.0 119 87.4
Nitab4.5_0001604g0080 Nicotiana tabacum HOM05D006458 ORTHO05D008433 2.6e-59 232.3 127 82.7
RcHm_v2.0_Chr5g0038891 Rosa chinensis HOM05D006458 ORTHO05D008433 2.6e-59 232.3 128 82.0
TWI39G1057 Tripterygium wilfordii HOM05D006458 ORTHO05D008433 2.6e-59 232.3 123 82.1
Cpa.g.sc97.30 Carica papaya HOM05D006458 ORTHO05D008433 4.4e-59 231.5 127 83.5
MSTRG.15157 Avicennia marina HOM05D006458 ORTHO05D008433 7.5e-59 230.7 126 82.5
Peaxi162Scf00450g00732 Petunia axillaris HOM05D006458 ORTHO05D008433 2.2e-58 229.2 125 81.6
FAN21G0544 Fragaria x ananassa HOM05D006458 ORTHO05D008433 2.9e-58 228.8 128 81.2
TAR626G0847 Trochodendron aralioides HOM05D006458 ORTHO05D008433 2.9e-58 228.8 128 79.7
Gohir.D13G143700 Gossypium hirsutum HOM05D006458 ORTHO05D008433 4.9e-58 228.0 128 78.1
Aqoxy2G01543 Aquilegia oxysepala HOM05D006458 ORTHO05D008433 1.4e-57 226.5 125 78.4
TAR629G1817 Trochodendron aralioides HOM05D006458 ORTHO05D008433 1.8e-57 226.1 126 79.4
vmacro09731 Vaccinium macrocarpon HOM05D006458 ORTHO05D008433 1.8e-57 226.1 165 67.9
PGR031G1917 Punica granatum HOM05D006458 ORTHO05D008433 1.2e-56 223.4 127 81.1
Gorai.002G087500 Gossypium raimondii HOM05D006458 ORTHO05D008433 2.0e-56 222.6 126 75.4
Sc03g0008720 Simmondsia chinensis HOM05D006458 ORTHO05D008433 2.0e-56 222.6 126 81.7
Gohir.D01G065600 Gossypium hirsutum HOM05D006458 ORTHO05D008433 2.7e-56 222.2 126 75.4
Gohir.A01G078500 Gossypium hirsutum HOM05D006458 ORTHO05D008433 3.5e-56 221.9 126 76.2
AUR62015736 Chenopodium quinoa HOM05D006458 ORTHO05D008433 5.9e-56 221.1 121 83.5
AUR62020475 Chenopodium quinoa HOM05D006458 ORTHO05D008433 5.9e-56 221.1 121 83.5
THA.LOC104817659 Tarenaya hassleriana HOM05D006458 ORTHO05D008433 5.9e-56 221.1 124 80.6
PSO541G1528 Papaver somniferum HOM05D006458 ORTHO05D008433 7.8e-56 220.7 128 76.6
Thhalv10014954m.g Eutrema salsugineum HOM05D006458 ORTHO05D008433 1.3e-55 219.9 124 79.0
PSO675G3423 Papaver somniferum HOM05D006458 ORTHO05D008433 2.3e-55 219.2 128 76.6
MBI18_g24806_MAGBIO Magnolia biondii HOM05D006458 ORTHO05D008433 3.9e-55 218.4 119 82.4
CARHR268190 Cardamine hirsuta HOM05D006458 ORTHO05D008433 5.0e-55 218.0 124 79.0
CDE05G1373 Ceratophyllum demersum HOM05D006458 ORTHO05D008433 5.0e-55 218.0 123 77.2
Sp6g16820 Schrenkiella parvula HOM05D006458 ORTHO05D008433 5.0e-55 218.0 124 78.2
Aa31LG3G10770 Aethionema arabicum HOM05D006458 ORTHO05D008433 6.6e-55 217.6 123 78.0
SalBow7G4274 Salvia bowleyana HOM05D006458 ORTHO05D008433 2.5e-54 215.7 153 66.7
Zm00001eb178010 Zea mays HOM05D006458 ORTHO05D008433 2.5e-54 215.7 126 76.2
AL8G30300 Arabidopsis lyrata HOM05D006458 ORTHO05D008433 4.3e-54 214.9 124 77.4
ATR0752G141 Amborella trichopoda HOM05D006458 ORTHO05D008433 7.3e-54 214.2 122 75.4
AT5G54855 Arabidopsis thaliana HOM05D006458 ORTHO05D008433 7.3e-54 214.2 124 77.4
BcaB08g35852 Brassica carinata HOM05D006458 ORTHO05D008433 9.5e-54 213.8 124 76.6
Carub.0008s1515 Capsella rubella HOM05D006458 ORTHO05D008433 9.5e-54 213.8 123 77.2
Os02g0317800 Oryza sativa ssp. japonica HOM05D006458 ORTHO05D008433 1.2e-53 213.4 121 77.7
BcaC04g20291 Brassica carinata HOM05D006458 ORTHO05D008433 2.1e-53 212.6 124 76.6
BraA10t43315Z Brassica rapa HOM05D006458 ORTHO05D008433 2.1e-53 212.6 124 76.6
RhsimUnG0251700 Rhododendron simsii HOM05D006458 ORTHO05D008433 2.1e-53 212.6 215 54.0
CDE02G3449 Ceratophyllum demersum HOM05D006458 ORTHO05D008433 4.7e-53 211.5 123 76.4
EL10Ac4g07850 Beta vulgaris HOM05D006458 ORTHO05D008433 1.0e-52 210.3 121 79.3
A10p12190 Brassica napus HOM05D006458 ORTHO05D008433 1.0e-52 210.3 124 75.8
Hund02079 Selenicereus undatus HOM05D006458 ORTHO05D008433 3.1e-52 208.8 123 77.2
Ah.04g165770 Amaranthus hybridus HOM05D006458 ORTHO05D008433 4.0e-52 208.4 124 75.0
C09p45410 Brassica napus HOM05D006458 ORTHO05D008433 4.0e-52 208.4 123 75.6
unitig_8.g4602 Utricularia gibba HOM05D006458 ORTHO05D008433 8.9e-52 207.2 124 77.4
CSS0035522 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 4.4e-51 204.9 128 76.6
Nn1g03576 Nelumbo nucifera HOM05D006458 ORTHO05D008433 9.2e-49 197.2 107 82.2
HPP92_005293 Vanilla planifolia HOM05D006458 ORTHO05D008433 2.3e-47 192.6 127 66.1
Sabra11G0123000 Salix brachista HOM05D006458 ORTHO05D008433 3.9e-47 191.8 159 61.0
MELO3C031911.2 Cucumis melo HOM05D006458 ORTHO05D008433 3.1e-44 182.2 101 83.2
Oeu062597.2 Olea europaea HOM05D006458 ORTHO05D008433 4.0e-44 181.8 94 87.2
Eucgr.F03456 Eucalyptus grandis HOM05D006458 ORTHO05D008433 8.9e-44 180.6 93 88.2
ECA236G2465 Erigeron canadensis HOM05D000653 ORTHO05D008581 2.6e-43 179.1 96 82.3
SalBow7G3069 Salvia bowleyana HOM05D006458 ORTHO05D008433 8.3e-42 174.1 96 81.2
Atru.chr2.3327 Acer truncatum HOM05D006458 ORTHO05D008433 3.0e-39 165.6 96 82.3
Nitab4.5_0000296g0120 Nicotiana tabacum HOM05D006458 ORTHO05D008433 1.6e-37 159.8 97 74.2
SEGI_29279 Sequoiadendron giganteum HOM05D006458 ORTHO05D008433 1.6e-32 143.3 102 69.6
AUR62029374 Chenopodium quinoa HOM05D001363 ORTHO05D006255 1.1e-22 110.5 110 55.5
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 1.7e-15 86.7 43 86.0
Atru.chr2.3388 Acer truncatum HOM05D006458 ORTHO05D008433 2.3e-15 86.3 71 59.2
FAN25G2931 Fragaria x ananassa HOM05D006458 ORTHO05D008433 2.2e-10 69.7 35 94.3
RcHm_v2.0_Chr5g0038871 Rosa chinensis HOM05D006458 ORTHO05D008433 1.2e-08 63.9 58 50.0
TPR.G13209 Trifolium pratense HOM05D006458 ORTHO05D008433 2.1e-08 63.2 31 80.6
Nitab4.5_0000286g0120 Nicotiana tabacum HOM05D006458 ORTHO05D008433 5.1e-07 58.5 59 52.5
MD13G1229600 Malus domestica HOM05D006458 ORTHO05D245398 9.6e-06 54.3 36 69.4


User provided reference genes

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