Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046697 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 1.1e-209 733.0 372 100.0
Actinidia10609 Actinidia chinensis HOM05D005438 ORTHO05D006744 3.7e-144 515.4 386 72.8
Rhsim02G0235700 Rhododendron simsii HOM05D005438 ORTHO05D006744 7.9e-139 497.7 371 72.0
Dinv37597 Davidia involucrata HOM05D005438 ORTHO05D006744 6.1e-131 471.5 384 69.0
TAR374G1319 Trochodendron aralioides HOM05D005438 ORTHO05D006744 2.7e-126 456.1 376 67.3
vmacro11410 Vaccinium macrocarpon HOM05D005438 ORTHO05D006744 5.9e-126 454.9 381 66.4
CiPaw.11G129800 Carya illinoinensis HOM05D005438 ORTHO05D006744 2.0e-121 439.9 386 64.0
GSVIVG01019417001 Vitis vinifera HOM05D005438 ORTHO05D006744 7.5e-121 438.0 382 64.1
Ciclev10020644m.g Citrus clementina HOM05D005438 ORTHO05D006744 2.0e-118 429.9 387 63.6
CsaV3_5G002390 Cucumis sativus L. HOM05D005438 ORTHO05D006744 2.7e-118 429.5 383 62.1
QL12p031793 Quercus lobata HOM05D005438 ORTHO05D006744 3.5e-118 429.1 416 59.1
Atru.chr9.2115 Acer truncatum HOM05D005438 ORTHO05D006744 1.0e-117 427.6 387 62.8
arahy.Tifrunner.gnm1.ann1.Y7QUAU Arachis hypogaea HOM05D005438 ORTHO05D006744 5.0e-117 425.2 374 62.8
HanXRQChr02g0049721 Helianthus annuus HOM05D005438 ORTHO05D006744 5.0e-117 425.2 375 64.0
arahy.Tifrunner.gnm1.ann1.I29YTG Arachis hypogaea HOM05D005438 ORTHO05D006744 1.9e-116 423.3 376 62.5
Nn1g01673 Nelumbo nucifera HOM05D005438 ORTHO05D006744 2.5e-116 422.9 403 58.3
MELO3C005715.2 Cucumis melo HOM05D005438 ORTHO05D006744 4.2e-116 422.2 379 61.7
Thecc.03G286500 Theobroma cacao HOM05D005438 ORTHO05D006744 4.7e-115 418.7 383 63.2
ECA233G5263 Erigeron canadensis HOM05D005438 ORTHO05D006744 1.4e-114 417.2 383 61.9
Phvul.002G293100 Phaseolus vulgaris HOM05D005438 ORTHO05D006744 1.4e-114 417.2 381 60.4
Gohir.D03G078500 Gossypium hirsutum HOM05D005438 ORTHO05D006744 1.8e-114 416.8 383 61.6
PGSC0003DMG400012320 Solanum tuberosum HOM05D005438 ORTHO05D006744 3.0e-114 416.0 369 61.5
Gorai.003G085600 Gossypium raimondii HOM05D005438 ORTHO05D006744 2.0e-113 413.3 384 61.7
Nitab4.5_0007906g0070 Nicotiana tabacum HOM05D005438 ORTHO05D006744 2.6e-113 412.9 371 60.9
Nitab4.5_0003015g0090 Nicotiana tabacum HOM05D005438 ORTHO05D006744 4.4e-113 412.1 373 60.9
Gohir.A02G105300 Gossypium hirsutum HOM05D005438 ORTHO05D006744 5.7e-113 411.8 381 61.2
CAN.G532.38 Capsicum annuum HOM05D005438 ORTHO05D006744 7.5e-113 411.4 369 60.2
VMungo0251G0328 Vigna mungo HOM05D005438 ORTHO05D006744 7.5e-113 411.4 380 60.0
COL.COLO4_08362 Corchorus olitorius HOM05D005438 ORTHO05D006744 1.3e-112 410.6 381 62.5
TWI60G1446 Tripterygium wilfordii HOM05D005438 ORTHO05D006744 1.3e-112 410.6 389 60.4
Duzib084G0802 Durio zibethinus HOM05D005438 ORTHO05D006744 2.2e-112 409.8 383 61.4
Cc08_g15250 Coffea canephora HOM05D005438 ORTHO05D006744 6.3e-112 408.3 385 61.3
Prupe.5G106500 Prunus persica HOM05D005438 ORTHO05D006744 1.1e-111 407.5 384 61.2
Manes.01G057900 Manihot esculenta HOM05D005438 ORTHO05D006744 9.2e-111 404.4 414 58.9
Lsat_1_v5_gn_3_8761 Lactuca sativa HOM05D005438 ORTHO05D006744 2.0e-110 403.3 379 62.5
Solyc08g081580.4 Solanum lycopersicum HOM05D005438 ORTHO05D006744 2.7e-110 402.9 368 60.3
Glyma.08G018100 Glycine max HOM05D005438 ORTHO05D006744 5.9e-110 401.7 376 60.4
Lj2C178T12 Lonicera japonica HOM05D005438 ORTHO05D006744 7.8e-110 401.4 383 61.6
MD14G1111900 Malus domestica HOM05D005438 ORTHO05D006744 5.0e-109 398.7 377 60.7
Ca_10950_v3 Cicer arietinum L. HOM05D005438 ORTHO05D006744 8.6e-109 397.9 376 60.1
Atru.BG.199.p Acer truncatum HOM05D005438 ORTHO05D006744 1.1e-108 397.5 375 61.6
CSS0015982 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 1.1e-108 397.5 370 64.1
Lj4g0011941 Lotus japonicus HOM05D005438 ORTHO05D006744 1.5e-108 397.1 378 59.8
ClCG01G002320 Citrullus lanatus HOM05D005438 ORTHO05D006744 1.9e-108 396.7 376 59.6
Peaxi162Scf00074g01737 Petunia axillaris HOM05D005438 ORTHO05D006744 5.6e-108 395.2 372 59.1
Sed0027839 Sechium edule HOM05D005438 ORTHO05D006744 1.6e-107 393.7 385 59.0
Sopen08g029890 Solanum pennellii HOM05D005438 ORTHO05D006744 1.6e-107 393.7 369 58.8
CANSAT21G0041 Cannabis sativa HOM05D005438 ORTHO05D006744 2.1e-107 393.3 385 59.0
Potri.003G132600 Populus trichocarpa HOM05D005438 ORTHO05D006744 2.8e-107 392.9 423 54.8
Duzib205G0010 Durio zibethinus HOM05D005438 ORTHO05D006744 8.0e-107 391.3 373 59.8
Lalb_Chr05g0224491 Lupinus albus HOM05D005438 ORTHO05D006744 1.0e-106 391.0 376 59.0
DCAR_004611 Daucus carota HOM05D005438 ORTHO05D006744 1.8e-106 390.2 376 59.3
Sabra03G0095000 Salix brachista HOM05D005438 ORTHO05D006744 1.8e-106 390.2 422 54.5
Eucgr.L02379 Eucalyptus grandis HOM05D005438 ORTHO05D006744 2.3e-106 389.8 377 59.4
Eucgr.D01812 Eucalyptus grandis HOM05D005438 ORTHO05D006744 4.0e-106 389.0 377 59.4
Gorai.008G250200 Gossypium raimondii HOM05D005438 ORTHO05D006744 6.8e-106 388.3 384 60.4
RcHm_v2.0_Chr7g0196591 Rosa chinensis HOM05D005438 ORTHO05D006744 6.8e-106 388.3 373 60.3
Glyma.05G211800 Glycine max HOM05D005438 ORTHO05D006744 1.2e-105 387.5 376 59.0
Gohir.D12G233900 Gossypium hirsutum HOM05D005438 ORTHO05D006744 3.4e-105 386.0 377 59.4
Aqoxy7G00195 Aquilegia oxysepala HOM05D005438 ORTHO05D006744 5.7e-105 385.2 385 57.4
Hund11433 Selenicereus undatus HOM05D005438 ORTHO05D006744 7.5e-105 384.8 385 57.4
Migut.J01399 Erythranthe guttata HOM05D005438 ORTHO05D006744 9.8e-105 384.4 377 60.5
MBI11_g09068_MAGBIO Magnolia biondii HOM05D005438 ORTHO05D006744 1.7e-104 383.6 365 60.5
FAN08G1515 Fragaria x ananassa HOM05D005438 ORTHO05D006744 2.2e-104 383.3 374 59.1
FAN04G0810 Fragaria x ananassa HOM05D005438 ORTHO05D006744 2.4e-103 379.8 375 59.2
Medtr8g098940 Medicago truncatula HOM05D005438 ORTHO05D006744 2.4e-103 379.8 379 57.8
FvH4_5g03190 Fragaria vesca HOM05D005438 ORTHO05D006744 1.2e-102 377.5 374 58.8
FAN18G2027 Fragaria x ananassa HOM05D005438 ORTHO05D006744 2.7e-102 376.3 374 58.6
FAN13G0364 Fragaria x ananassa HOM05D005438 ORTHO05D006744 5.9e-102 375.2 374 58.3
PGR031G2565 Punica granatum HOM05D005438 ORTHO05D006744 5.9e-102 375.2 378 59.5
Psat7g029680 Pisum sativum HOM05D005438 ORTHO05D006744 1.7e-101 373.6 375 57.6
TPR.G12953 Trifolium pratense HOM05D005438 ORTHO05D006744 2.5e-100 369.8 376 58.8
AUR62019752 Chenopodium quinoa HOM05D005438 ORTHO05D006744 4.3e-100 369.0 375 55.5
AUR62010754 Chenopodium quinoa HOM05D005438 ORTHO05D006744 7.3e-100 368.2 375 55.7
SGA_v2.0_scaffold173G39139 Striga asiatica HOM05D005438 ORTHO05D006744 4.0e-98 362.5 402 55.5
Ah.12g051920 Amaranthus hybridus HOM05D005438 ORTHO05D006744 5.8e-97 358.6 390 53.1
PSO266G0069 Papaver somniferum HOM05D005438 ORTHO05D006744 9.8e-97 357.8 395 54.4
PSO478G3903 Papaver somniferum HOM05D005438 ORTHO05D006744 6.4e-96 355.1 395 53.9
EL10Ac5g12834 Beta vulgaris HOM05D005438 ORTHO05D006744 3.2e-95 352.8 353 56.1
THA.LOC104817794 Tarenaya hassleriana HOM05D005438 ORTHO05D006744 3.2e-95 352.8 394 53.6
PSO017G3503 Papaver somniferum HOM05D005438 ORTHO05D006744 4.1e-95 352.4 391 53.2
Migut.A00720 Erythranthe guttata HOM05D005438 ORTHO05D006744 9.2e-95 351.3 385 55.1
Zm00001eb001860 Zea mays HOM05D005438 ORTHO05D006744 2.0e-94 350.1 399 54.6
Os03g0125300 Oryza sativa ssp. japonica HOM05D005438 ORTHO05D006744 3.5e-94 349.4 394 53.0
MD06G1091000 Malus domestica HOM05D005438 ORTHO05D006744 5.6e-92 342.0 373 54.7
HanXRQChr17g0533211 Helianthus annuus HOM05D005438 ORTHO05D006744 7.3e-92 341.7 363 55.6
Aa31LG2G1070 Aethionema arabicum HOM05D005438 ORTHO05D006744 9.5e-92 341.3 397 52.1
ATR0661G541 Amborella trichopoda HOM05D005438 ORTHO05D006744 2.3e-90 336.7 415 49.6
Gohir.A12G233400 Gossypium hirsutum HOM05D005438 ORTHO05D006744 8.9e-90 334.7 376 55.3
HPP92_021018 Vanilla planifolia HOM05D005438 ORTHO05D006744 1.2e-89 334.3 373 53.9
CDE04G0809 Ceratophyllum demersum HOM05D005438 ORTHO05D006744 1.5e-89 334.0 375 54.9
Thhalv10023525m.g Eutrema salsugineum HOM05D005438 ORTHO05D006744 2.0e-89 333.6 403 51.9
AL2G11130 Arabidopsis lyrata HOM05D005438 ORTHO05D006744 2.6e-89 333.2 407 50.6
AT1G63980 Arabidopsis thaliana HOM05D005438 ORTHO05D006744 4.4e-89 332.4 420 50.0
Carub.0002s0086 Capsella rubella HOM05D005438 ORTHO05D006744 4.4e-89 332.4 413 50.6
A09p14060 Brassica napus HOM05D005438 ORTHO05D006744 7.5e-89 331.6 415 50.6
BcaC04g22661 Brassica carinata HOM05D005438 ORTHO05D006744 1.4e-87 327.4 417 49.6
BcaB07g31532 Brassica carinata HOM05D005438 ORTHO05D006744 7.1e-87 325.1 424 49.1
C09p18360 Brassica napus HOM05D005438 ORTHO05D006744 4.6e-86 322.4 430 49.3
BraA09t37053Z Brassica rapa HOM05D005438 ORTHO05D006744 1.0e-85 321.2 416 49.3
BcaB07g31422 Brassica carinata HOM05D005438 ORTHO05D006744 1.3e-85 320.9 417 47.7
Sp2g00710 Schrenkiella parvula HOM05D005438 ORTHO05D006744 3.0e-85 319.7 429 47.6
BolC9t54592H Brassica oleracea HOM05D005438 ORTHO05D006744 1.1e-84 317.8 419 49.2
A09p15160 Brassica napus HOM05D005438 ORTHO05D006744 1.9e-84 317.0 425 48.9
BolC9t54729H Brassica oleracea HOM05D005438 ORTHO05D006744 3.3e-84 316.2 431 48.0
C09p16950 Brassica napus HOM05D005438 ORTHO05D006744 9.5e-84 314.7 422 49.1
CARHR047000 Cardamine hirsuta HOM05D005438 ORTHO05D006744 2.1e-83 313.5 413 47.9
BraA09t37158Z Brassica rapa HOM05D005438 ORTHO05D006744 3.1e-82 309.7 429 47.8
SEGI_20773 Sequoiadendron giganteum HOM05D005438 ORTHO05D006744 6.8e-82 308.5 436 45.2
Sc01g0009850 Simmondsia chinensis HOM05D005438 ORTHO05D006744 5.8e-81 305.4 320 54.7
unitig_32.g10979 Utricularia gibba HOM05D005438 ORTHO05D006744 1.2e-70 271.2 335 51.0
Haze_08758 Corylus avellana HOM05D005438 ORTHO05D006744 6.9e-66 255.4 312 51.9
SMO134G0098 Selaginella moellendorffii HOM05D005438 ORTHO05D006744 2.4e-58 230.3 368 41.0
Lsat_1_v5_gn_1_49360 Lactuca sativa HOM05D005438 ORTHO05D006744 2.6e-57 226.9 187 69.0
Lsat_1_v5_gn_5_103140 Lactuca sativa HOM05D005438 ORTHO05D006744 2.6e-57 226.9 187 69.0
Lsat_1_v5_gn_9_38321 Lactuca sativa HOM05D005438 ORTHO05D006744 2.6e-57 226.9 187 69.0
Actinidia28345 Actinidia chinensis HOM05D005438 ORTHO05D006744 3.0e-53 213.4 382 43.7
Pp3c2_28530 Physcomitrium patens HOM05D005438 ORTHO05D006744 1.9e-52 210.7 423 38.1
Mapoly0090s0083 Marchantia polymorpha HOM05D005438 ORTHO05D006744 1.4e-50 204.5 491 34.4
CSS0040427 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 2.1e-46 190.7 149 69.1
BcaC04g22519 Brassica carinata HOM05D005438 ORTHO05D006744 6.7e-45 185.7 297 43.1
SHI31900 Sapria himalayana HOM05D005438 ORTHO05D006744 4.3e-44 183.0 301 42.5
AagrBONN_evm.TU.Sc2ySwM_344.4712 Anthoceros agrestis HOM05D005438 ORTHO05D006744 4.8e-43 179.5 544 31.4
CDE12G0222 Ceratophyllum demersum HOM05D005438 ORTHO05D006744 7.4e-36 155.6 150 57.3
Pp3c7_27020 Physcomitrium patens HOM05D005438 ORTHO05D006744 4.8e-35 152.9 401 33.4
Cpa.g.c39085 Carica papaya HOM05D005438 ORTHO05D006744 6.3e-35 152.5 161 56.5
Cpa.g.sc631.4 Carica papaya HOM05D005438 ORTHO05D006744 1.4e-31 141.4 149 55.7
BcaNung05361 Brassica carinata HOM05D005438 ORTHO05D006744 3.0e-29 133.7 206 45.1
CBR_g35011 Chara braunii HOM05D005438 ORTHO05D006744 1.9e-23 114.4 316 32.0
ATR0661G444 Amborella trichopoda HOM05D005438 ORTHO05D006744 3.9e-21 106.7 200 39.0
Cre07.g347300 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D021338 4.8e-19 99.8 377 26.3
Cre07.g347400 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D006744 4.8e-19 99.8 377 26.3
ECA246G3112 Erigeron canadensis HOM05D005438 ORTHO05D006744 1.7e-16 91.3 83 57.8
HanXRQChr16g0521071 Helianthus annuus HOM05D005438 ORTHO05D006744 4.4e-12 76.6 45 80.0
ClCG01G002340 Citrullus lanatus HOM05D005438 ORTHO05D006744 1.3e-11 75.1 112 42.9
Cre01.g054000 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D006744 9.4e-07 58.9 79 41.8
MCO11G547 Micromonas commoda HOM05D005438 ORTHO05D006744 6.1e-06 56.2 322 24.5
AagrBONN_evm.TU.Sc2ySwM_344.4702 Anthoceros agrestis HOM05D005438 ORTHO05D006744 8.0e-06 55.8 126 31.7


User provided reference genes

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