Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046667 Camellia sinensis var. sinensis HOM05D007057 ORTHO05D008878 7.1e-114 414.8 388 100.0
CSS0040779 Camellia sinensis var. sinensis HOM05D007057 ORTHO05D008878 1.8e-64 250.8 203 85.2
CSS0018282 Camellia sinensis var. sinensis HOM05D007057 ORTHO05D008878 3.0e-64 250.0 203 84.7
CSS0040898 Camellia sinensis var. sinensis HOM05D007057 ORTHO05D008878 3.0e-64 250.0 203 84.7
vmacro06001 Vaccinium macrocarpon HOM05D007057 ORTHO05D008878 5.1e-56 222.6 228 73.2
Potri.013G087200 Populus trichocarpa HOM05D007057 ORTHO05D008878 1.7e-54 217.6 226 67.7
Rhsim03G0265600 Rhododendron simsii HOM05D007057 ORTHO05D008878 6.3e-54 215.7 228 71.5
GSVIVG01019130001 Vitis vinifera HOM05D007057 ORTHO05D008878 1.4e-53 214.5 228 66.7
Dinv04346 Davidia involucrata HOM05D007057 ORTHO05D008878 4.1e-53 213.0 228 69.3
TWI18G1405 Tripterygium wilfordii HOM05D007057 ORTHO05D008878 1.2e-52 211.5 391 72.4
Haze_04538 Corylus avellana HOM05D007057 ORTHO05D008878 4.5e-52 209.5 226 66.4
Duzib177G0705 Durio zibethinus HOM05D007057 ORTHO05D008878 1.0e-51 208.4 226 65.0
Gohir.A05G390700 Gossypium hirsutum HOM05D007057 ORTHO05D008878 1.7e-51 207.6 226 66.4
Duzib128G1528 Durio zibethinus HOM05D007057 ORTHO05D008878 2.2e-51 207.2 226 66.4
Gohir.D04G026500 Gossypium hirsutum HOM05D007057 ORTHO05D008878 6.5e-51 205.7 226 66.4
Thecc.05G201600 Theobroma cacao HOM05D007057 ORTHO05D008878 1.9e-50 204.1 222 66.7
Manes.08G104600 Manihot esculenta HOM05D007057 ORTHO05D008878 1.2e-49 201.4 225 65.3
Cfa006273 Carpinus fangiana HOM05D007057 ORTHO05D008878 1.6e-49 201.1 226 65.5
QL01p045590 Quercus lobata HOM05D007057 ORTHO05D008878 6.1e-49 199.1 225 60.9
Cpa.g.sc123.6 Carica papaya HOM05D007057 ORTHO05D008878 2.3e-48 197.2 227 66.5
RcHm_v2.0_Chr3g0448121 Rosa chinensis HOM05D007057 ORTHO05D008878 5.2e-48 196.1 228 60.5
Ciclev10013603m.g Citrus clementina HOM05D007057 ORTHO05D008878 6.7e-48 195.7 228 64.0
CsaV3_1G044640 Cucumis sativus L. HOM05D007057 ORTHO05D008878 4.4e-47 193.0 225 62.2
Actinidia34764 Actinidia chinensis HOM05D007057 ORTHO05D008878 7.4e-47 192.2 195 74.4
MELO3C010073.2 Cucumis melo HOM05D007057 ORTHO05D008878 1.7e-46 191.0 225 61.3
Eucgr.H01380 Eucalyptus grandis HOM05D007057 ORTHO05D008878 3.1e-45 186.8 227 61.2
Sed0005007 Sechium edule HOM05D007057 ORTHO05D008878 3.1e-45 186.8 224 60.3
FAN02G0321 Fragaria x ananassa HOM05D007057 ORTHO05D008878 4.1e-45 186.4 228 55.3
ClCG03G010890 Citrullus lanatus HOM05D007057 ORTHO05D008878 7.0e-45 185.7 224 61.6
PGR031G0541 Punica granatum HOM05D007057 ORTHO05D008878 1.2e-44 184.9 226 61.1
FAN05G1805 Fragaria x ananassa HOM05D007057 ORTHO05D008878 1.6e-44 184.5 228 54.8
CANSAT54G2802 Cannabis sativa HOM05D007057 ORTHO05D008878 2.0e-44 184.1 231 63.2
FvH4_6g00680 Fragaria vesca HOM05D007057 ORTHO05D008878 4.5e-44 183.0 228 54.8
FAN14G3263 Fragaria x ananassa HOM05D007057 ORTHO05D008878 4.5e-44 183.0 228 54.8
Glyma.09G251800 Glycine max HOM05D007057 ORTHO05D008878 1.0e-43 181.8 226 64.6
Atru.chr10.1100 Acer truncatum HOM05D007057 ORTHO05D008878 1.7e-43 181.0 227 63.0
FAN27G3162 Fragaria x ananassa HOM05D007057 ORTHO05D008878 6.5e-43 179.1 225 55.1
Glyma.18G240800 Glycine max HOM05D007057 ORTHO05D008878 6.5e-43 179.1 226 63.7
FAN09G2991 Fragaria x ananassa HOM05D007057 ORTHO05D008878 8.5e-43 178.7 228 52.2
Sopen04g025560 Solanum pennellii HOM05D007057 ORTHO05D008878 9.4e-42 175.3 225 61.8
Lj1g0009704 Lotus japonicus HOM05D007057 ORTHO05D008878 1.2e-41 174.9 226 63.3
VMungo1383G0494 Vigna mungo HOM05D007057 ORTHO05D008878 1.2e-41 174.9 225 64.0
Prupe.6G359800 Prunus persica HOM05D007057 ORTHO05D008878 1.6e-41 174.5 226 59.7
Solyc04g056640.1 Solanum lycopersicum HOM05D007057 ORTHO05D008878 1.6e-41 174.5 225 62.2
PGSC0003DMG400010523 Solanum tuberosum HOM05D007057 ORTHO05D008878 2.1e-41 174.1 225 62.2
TWI75G1373 Tripterygium wilfordii HOM05D007057 ORTHO05D008878 6.1e-41 172.6 226 60.6
Medtr7g079550 Medicago truncatula HOM05D007057 ORTHO05D008878 4.0e-40 169.9 225 61.8
Gorai.012G029100 Gossypium raimondii HOM05D007057 ORTHO05D008878 8.8e-40 168.7 226 60.2
Peaxi162Scf00006g00421 Petunia axillaris HOM05D007057 ORTHO05D008878 8.8e-40 168.7 226 61.9
Peaxi162Scf00976g00023 Petunia axillaris HOM05D007057 ORTHO05D008878 8.8e-40 168.7 225 62.2
Nitab4.5_0001857g0020 Nicotiana tabacum HOM05D007057 ORTHO05D008878 1.2e-39 168.3 387 70.8
MSTRG.8219 Avicennia marina HOM05D007057 ORTHO05D008878 3.4e-39 166.8 226 58.0
TAR362G1011 Trochodendron aralioides HOM05D007057 ORTHO05D008878 3.4e-39 166.8 220 60.9
CAN.G217.2 Capsicum annuum HOM05D007057 ORTHO05D008878 1.7e-38 164.5 226 60.6
FAN28G1564 Fragaria x ananassa HOM05D007057 ORTHO05D008878 2.2e-38 164.1 212 54.7
Lalb_Chr19g0126731 Lupinus albus HOM05D007057 ORTHO05D008878 4.8e-38 162.9 223 59.6
TPR.G28458 Trifolium pratense HOM05D007057 ORTHO05D008878 1.1e-37 161.8 224 62.5
Cc09_g03450 Coffea canephora HOM05D007057 ORTHO05D008878 1.4e-37 161.4 225 60.4
Nitab4.5_0000946g0060 Nicotiana tabacum HOM05D007057 ORTHO05D008878 5.4e-37 159.5 225 60.0
AL2G22040 Arabidopsis lyrata HOM05D007057 ORTHO05D008878 2.0e-36 157.5 232 45.3
AT1G65380 Arabidopsis thaliana HOM05D007057 ORTHO05D008878 2.0e-36 157.5 232 46.6
DCAR_001923 Daucus carota HOM05D007057 ORTHO05D008878 5.9e-36 156.0 225 57.3
Lalb_Chr03g0038391 Lupinus albus HOM05D007057 ORTHO05D008878 5.9e-36 156.0 223 57.0
Oeu010152.2 Olea europaea HOM05D007057 ORTHO05D008878 2.2e-35 154.1 227 59.0
Carub.0002s1110 Capsella rubella HOM05D007057 ORTHO05D008878 3.8e-35 153.3 228 50.4
Ah.04g158850 Amaranthus hybridus HOM05D007057 ORTHO05D008878 1.9e-34 151.0 228 56.6
Aa31LG2G2430 Aethionema arabicum HOM05D007057 ORTHO05D008878 2.5e-34 150.6 228 43.9
BcaB05g24110 Brassica carinata HOM05D007057 ORTHO05D008878 4.2e-34 149.8 225 50.7
Thhalv10018195m.g Eutrema salsugineum HOM05D007057 ORTHO05D008878 7.2e-34 149.1 228 45.6
AUR62006672 Chenopodium quinoa HOM05D007057 ORTHO05D008878 1.2e-33 148.3 228 54.4
C02p21340 Brassica napus HOM05D007057 ORTHO05D008878 2.1e-33 147.5 227 44.9
EL10Ac4g09982 Beta vulgaris HOM05D007057 ORTHO05D008878 2.7e-33 147.1 227 53.7
A02p13180 Brassica napus HOM05D007057 ORTHO05D008878 2.7e-33 147.1 227 48.9
BraA02t06374Z Brassica rapa HOM05D007057 ORTHO05D008878 6.1e-33 146.0 227 49.3
AUR62000330 Chenopodium quinoa HOM05D007057 ORTHO05D008878 6.1e-33 146.0 228 53.9
BcaC03g14695 Brassica carinata HOM05D007057 ORTHO05D008878 8.0e-33 145.6 227 48.9
BolC2t08271H Brassica oleracea HOM05D007057 ORTHO05D008878 8.0e-33 145.6 227 48.9
Migut.L01029 Erythranthe guttata HOM05D007057 ORTHO05D008878 1.4e-32 144.8 226 56.2
THA.LOC104823816 Tarenaya hassleriana HOM05D007057 ORTHO05D008878 1.4e-32 144.8 217 46.1
CARHR057050 Cardamine hirsuta HOM05D007057 ORTHO05D008878 2.3e-32 144.1 228 44.7
ECA248G3256 Erigeron canadensis HOM05D007057 ORTHO05D008878 5.2e-32 142.9 223 56.1
COL.COLO4_27405 Corchorus olitorius HOM05D007057 ORTHO05D008878 1.5e-31 141.4 163 69.3
Sp5g20120 Schrenkiella parvula HOM05D007057 ORTHO05D008878 2.0e-31 141.0 227 52.4
Aqoxy2G03299 Aquilegia oxysepala HOM05D007057 ORTHO05D008878 7.5e-31 139.0 220 56.8
HanXRQChr01g0025821 Helianthus annuus HOM05D007057 ORTHO05D008878 3.1e-29 133.7 225 57.3
Psat3g104800 Pisum sativum HOM05D007057 ORTHO05D008878 3.1e-29 133.7 226 55.8
Ca_07967_v3 Cicer arietinum L. HOM05D007057 ORTHO05D008878 4.1e-29 133.3 226 56.2
Sc16g0010320 Simmondsia chinensis HOM05D007057 ORTHO05D008878 9.1e-29 132.1 229 52.4
Nn4g26683 Nelumbo nucifera HOM05D007057 ORTHO05D008878 4.5e-28 129.8 222 55.9
SGA_v2.0_scaffold71G23872 Striga asiatica HOM05D007057 ORTHO05D008878 2.3e-27 127.5 227 55.1
MBI08_g39972_MAGBIO Magnolia biondii HOM05D007057 ORTHO05D008878 3.8e-27 126.7 223 54.7
Lsat_1_v5_gn_1_58361 Lactuca sativa HOM05D007057 ORTHO05D008878 1.1e-26 125.2 230 54.8
PSO017G0140 Papaver somniferum HOM05D007057 ORTHO05D008878 4.2e-26 123.2 223 53.4
PSO675G4505 Papaver somniferum HOM05D007057 ORTHO05D008878 6.1e-25 119.4 223 52.5
CiPaw.07G078900 Carya illinoinensis HOM05D007057 ORTHO05D008878 5.7e-23 112.8 99 60.6
HPP92_021394 Vanilla planifolia HOM05D007057 ORTHO05D008878 6.3e-22 109.4 226 48.7
SalBow6G0986 Salvia bowleyana HOM05D007057 ORTHO05D008878 1.6e-17 94.7 152 45.4
ATR0824G263 Amborella trichopoda HOM05D007057 ORTHO05D008878 1.2e-15 88.6 187 51.3
Os02g0603100 Oryza sativa ssp. japonica HOM05D007057 ORTHO05D008878 4.6e-12 76.6 229 44.5
AUR62000327 Chenopodium quinoa HOM05D007057 ORTHO05D008878 6.0e-12 76.3 266 59.8
FAN26G2527 Fragaria x ananassa HOM05D007057 ORTHO05D008878 3.0e-11 73.9 76 50.0
Zm00001eb184050 Zea mays HOM05D007057 ORTHO05D008878 3.0e-11 73.9 238 43.3
SEGI_34516 Sequoiadendron giganteum HOM05D007057 ORTHO05D008878 1.5e-07 61.6 202 45.5
SEGI_35016 Sequoiadendron giganteum HOM05D007057 ORTHO05D008878 1.5e-07 61.6 202 45.5
BcaC03g14701 Brassica carinata HOM05D007057 ORTHO05D008878 3.4e-07 60.5 106 49.1
BcaB05g24109 Brassica carinata HOM05D007057 ORTHO05D008878 1.3e-06 58.5 45 66.7
BcaC03g14699 Brassica carinata HOM05D007057 ORTHO05D008878 2.2e-06 57.8 39 69.2


User provided reference genes

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