Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046664 Camellia sinensis var. sinensis HOM05D003518 ORTHO05D026429 7.3e-42 173.3 79 100.0
CSS0046424 Camellia sinensis var. sinensis HOM05D003518 ORTHO05D026429 2.6e-31 138.3 79 81.0
CSS0002907 Camellia sinensis var. sinensis HOM05D003518 ORTHO05D026429 1.3e-30 136.0 79 79.7
CSS0048282 Camellia sinensis var. sinensis HOM05D003518 ORTHO05D015542 7.6e-15 83.6 57 71.9
Actinidia33452 Actinidia chinensis HOM05D003518 ORTHO05D005164 1.3e-14 82.8 56 66.1
Dinv43741 Davidia involucrata HOM05D003518 ORTHO05D005164 1.3e-14 82.8 56 69.6
Potri.002G151800 Populus trichocarpa HOM05D003518 ORTHO05D005164 1.3e-14 82.8 56 71.4
Rhsim07G0023000 Rhododendron simsii HOM05D003518 ORTHO05D005164 2.9e-14 81.6 56 60.7
Dinv32408 Davidia involucrata HOM05D003518 ORTHO05D005164 1.4e-13 79.3 56 67.9
vmacro20980 Vaccinium macrocarpon HOM05D003518 ORTHO05D005164 1.4e-13 79.3 56 64.3
Sabra02G0120000 Salix brachista HOM05D003518 ORTHO05D005164 7.1e-13 77.0 55 65.5
GSVIVG01027580001 Vitis vinifera HOM05D003518 ORTHO05D005164 1.2e-12 76.3 56 60.7
CiPaw.01G258000 Carya illinoinensis HOM05D003518 ORTHO05D005164 2.7e-12 75.1 56 58.9
Actinidia27231 Actinidia chinensis HOM05D003518 ORTHO05D026429 3.5e-12 74.7 45 73.3
TWI59G1247 Tripterygium wilfordii HOM05D003518 ORTHO05D005164 3.5e-12 74.7 56 62.5
TAR614G0002 Trochodendron aralioides HOM05D003518 ORTHO05D005164 3.5e-12 74.7 56 62.5
Hma1.2p1_0132F.1_g060640 Hydrangea macrophylla HOM05D003518 ORTHO05D005164 6.0e-12 73.9 56 62.5
Manes.05G041800 Manihot esculenta HOM05D003518 ORTHO05D005164 7.9e-12 73.6 56 58.9
Sabra14G0053000 Salix brachista HOM05D003518 ORTHO05D005164 7.9e-12 73.6 56 58.9
TWI14G0835 Tripterygium wilfordii HOM05D003518 ORTHO05D005164 1.0e-11 73.2 56 60.7
Haze_16711 Corylus avellana HOM05D003518 ORTHO05D005164 1.3e-11 72.8 60 56.7
Rhsim01G0160000 Rhododendron simsii HOM05D003518 ORTHO05D005164 1.8e-11 72.4 56 58.9
CSS0016703 Camellia sinensis var. sinensis HOM05D003518 ORTHO05D015542 2.3e-11 72.0 42 73.8
CSS0010985 Camellia sinensis var. sinensis HOM05D003518 ORTHO05D015542 3.0e-11 71.6 42 73.8
Potri.014G074300 Populus trichocarpa HOM05D003518 ORTHO05D005164 3.0e-11 71.6 56 55.4
Manes.01G263400 Manihot esculenta HOM05D003518 ORTHO05D005164 3.9e-11 71.2 60 53.3
Duzib138G0903 Durio zibethinus HOM05D003518 ORTHO05D005164 5.1e-11 70.9 56 57.1
MD02G1197300 Malus domestica HOM05D003518 ORTHO05D005164 5.1e-11 70.9 56 55.4
FAN10G3707 Fragaria x ananassa HOM05D003518 ORTHO05D005164 1.9e-10 68.9 56 57.1
QL08p051054 Quercus lobata HOM05D003518 ORTHO05D005164 1.9e-10 68.9 56 55.4
CANSAT56G2265 Cannabis sativa HOM05D003518 ORTHO05D005164 2.5e-10 68.6 54 59.3
COL.COLO4_12652 Corchorus olitorius HOM05D003518 ORTHO05D005164 2.5e-10 68.6 56 58.9
Duzib133G1143 Durio zibethinus HOM05D003518 ORTHO05D005164 3.3e-10 68.2 56 55.4
MD07G1123700 Malus domestica HOM05D003518 ORTHO05D005164 3.3e-10 68.2 56 55.4
Oeu024431.2 Olea europaea HOM05D003518 ORTHO05D005164 3.3e-10 68.2 56 55.4
Thecc.01G371200 Theobroma cacao HOM05D003518 ORTHO05D005164 3.3e-10 68.2 56 57.1
Ciclev10019439m.g Citrus clementina HOM05D003518 ORTHO05D005164 5.6e-10 67.4 60 53.3
PGR042G3961 Punica granatum HOM05D003518 ORTHO05D005164 5.6e-10 67.4 56 55.4
Atru.chr5.372 Acer truncatum HOM05D003518 ORTHO05D005164 9.6e-10 66.6 56 57.1
Sc23g0003400 Simmondsia chinensis HOM05D003518 ORTHO05D005164 9.6e-10 66.6 56 57.1
Gohir.A11G083800 Gossypium hirsutum HOM05D003518 ORTHO05D005164 1.3e-09 66.2 60 51.7
RcHm_v2.0_Chr1g0351731 Rosa chinensis HOM05D003518 ORTHO05D005164 1.6e-09 65.9 56 55.4
FvH4_7g12710 Fragaria vesca HOM05D003518 ORTHO05D005164 2.1e-09 65.5 56 55.4
FAN01G1761 Fragaria x ananassa HOM05D003518 ORTHO05D005164 2.1e-09 65.5 56 55.4
FAN06G1131 Fragaria x ananassa HOM05D003518 ORTHO05D005164 2.1e-09 65.5 56 55.4
FAN06G5121 Fragaria x ananassa HOM05D003518 ORTHO05D005164 2.1e-09 65.5 56 55.4
Prupe.2G151300 Prunus persica HOM05D003518 ORTHO05D005164 2.1e-09 65.5 57 50.9
Cpa.g.sc18.167 Carica papaya HOM05D003518 ORTHO05D005164 2.8e-09 65.1 56 51.8
DCAR_015924 Daucus carota HOM05D003518 ORTHO05D005164 2.8e-09 65.1 56 57.1
Gohir.D11G088000 Gossypium hirsutum HOM05D003518 ORTHO05D005164 2.8e-09 65.1 56 53.6
Gorai.007G093900 Gossypium raimondii HOM05D003518 ORTHO05D005164 2.8e-09 65.1 56 53.6
TAR636G1560 Trochodendron aralioides HOM05D003518 ORTHO05D005164 2.8e-09 65.1 56 55.4
FAN03G3110 Fragaria x ananassa HOM05D003518 ORTHO05D005164 3.7e-09 64.7 56 55.4
DCAR_006891 Daucus carota HOM05D003518 ORTHO05D005164 4.8e-09 64.3 56 50.0
Migut.B01669 Erythranthe guttata HOM05D003518 ORTHO05D005164 6.2e-09 63.9 53 54.7
FAN10G3827 Fragaria x ananassa HOM05D003518 ORTHO05D005164 6.2e-09 63.9 56 53.6
CiPaw.02G164700 Carya illinoinensis HOM05D003518 ORTHO05D005164 8.1e-09 63.5 53 54.7
Eucgr.E01329 Eucalyptus grandis HOM05D003518 ORTHO05D005164 8.1e-09 63.5 56 50.0
A03p25290 Brassica napus HOM05D003518 ORTHO05D005164 2.4e-08 62.0 56 48.2
CARHR140890 Cardamine hirsuta HOM05D003518 ORTHO05D005164 2.4e-08 62.0 56 50.0
THA.LOC104802006 Tarenaya hassleriana HOM05D003518 ORTHO05D005164 2.4e-08 62.0 56 48.2
Cc02_g37010 Coffea canephora HOM05D003518 ORTHO05D005164 3.1e-08 61.6 53 50.9
Nn6g34312 Nelumbo nucifera HOM05D003518 ORTHO05D005164 3.1e-08 61.6 56 50.0
BcaC01g05115 Brassica carinata HOM05D003518 ORTHO05D005164 4.0e-08 61.2 56 48.2
C03p30180 Brassica napus HOM05D003518 ORTHO05D005164 4.0e-08 61.2 56 48.2
Carub.0004s2832 Capsella rubella HOM05D003518 ORTHO05D005164 4.0e-08 61.2 56 50.0
AL4G44840 Arabidopsis lyrata HOM05D003518 ORTHO05D005164 5.3e-08 60.8 56 48.2
Psat3g059680 Pisum sativum HOM05D003518 ORTHO05D022796 5.3e-08 60.8 62 50.0
Psat4g198920 Pisum sativum HOM05D003518 ORTHO05D005164 5.3e-08 60.8 62 50.0
Gohir.A12G102800 Gossypium hirsutum HOM05D003518 ORTHO05D005164 6.9e-08 60.5 62 46.8
BolC3t15366H Brassica oleracea HOM05D003518 ORTHO05D005164 9.0e-08 60.1 56 48.2
Gorai.008G115300 Gossypium raimondii HOM05D003518 ORTHO05D005164 9.0e-08 60.1 56 48.2
Sopen01g037730 Solanum pennellii HOM05D003518 ORTHO05D005164 9.0e-08 60.1 56 50.0
BraA03t11733Z Brassica rapa HOM05D003518 ORTHO05D005164 1.2e-07 59.7 56 46.4
SalBow7G3081 Salvia bowleyana HOM05D003518 ORTHO05D005164 1.2e-07 59.7 57 49.1
Solyc01g091950.4 Solanum lycopersicum HOM05D003518 ORTHO05D005164 1.5e-07 59.3 56 50.0
Aa31LG1G27140 Aethionema arabicum HOM05D003518 ORTHO05D005164 3.4e-07 58.2 56 48.2
CAN.G170.67 Capsicum annuum HOM05D003518 ORTHO05D005164 3.4e-07 58.2 56 46.4
BcaC02g07077 Brassica carinata HOM05D003518 ORTHO05D005164 4.5e-07 57.8 56 48.2
A04p33950 Brassica napus HOM05D003518 ORTHO05D005164 4.5e-07 57.8 56 48.2
C04p71760 Brassica napus HOM05D003518 ORTHO05D005164 4.5e-07 57.8 56 48.2
BolC4t28675H Brassica oleracea HOM05D003518 ORTHO05D005164 4.5e-07 57.8 56 48.2
BraA04t18856Z Brassica rapa HOM05D003518 ORTHO05D005164 4.5e-07 57.8 56 48.2
SGA_v2.0_scaffold153G37052 Striga asiatica HOM05D003518 ORTHO05D005164 5.8e-07 57.4 53 49.1
Ca_23782_v3 Cicer arietinum L. HOM05D003518 ORTHO05D005164 1.3e-06 56.2 56 48.2
BcaB01g03262 Brassica carinata HOM05D003518 ORTHO05D005164 1.7e-06 55.8 56 44.6
Thhalv10001388m.g Eutrema salsugineum HOM05D003518 ORTHO05D005164 1.7e-06 55.8 56 46.4
Lj3g0010840 Lotus japonicus HOM05D003518 ORTHO05D005164 1.7e-06 55.8 58 48.3
Nn1g01294 Nelumbo nucifera HOM05D003518 ORTHO05D005164 1.7e-06 55.8 56 46.4
BcaB06g29432 Brassica carinata HOM05D003518 ORTHO05D005164 2.2e-06 55.5 56 46.4
AUR62033382 Chenopodium quinoa HOM05D003518 ORTHO05D005164 2.2e-06 55.5 56 42.9
MSTRG.20781 Avicennia marina HOM05D003518 ORTHO05D005164 2.9e-06 55.1 53 47.2
EL10Ac1g00954 Beta vulgaris HOM05D003518 ORTHO05D005164 2.9e-06 55.1 57 43.9
Peaxi162Scf00021g00116 Petunia axillaris HOM05D003518 ORTHO05D005164 3.8e-06 54.7 56 46.4
Sp4g27710 Schrenkiella parvula HOM05D003518 ORTHO05D005164 4.9e-06 54.3 56 44.6


User provided reference genes

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