Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046659 Camellia sinensis var. sinensis HOM05D005091 ORTHO05D006047 1.1e-49 199.5 93 100.0
CSS0007587 Camellia sinensis var. sinensis HOM05D005091 ORTHO05D006047 4.1e-44 181.0 98 88.8
CSS0014539 Camellia sinensis var. sinensis HOM05D005091 ORTHO05D006047 6.8e-31 137.1 70 92.9
CSS0022719 Camellia sinensis var. sinensis HOM05D005091 ORTHO05D006047 6.8e-31 137.1 70 92.9
CSS0037916 Camellia sinensis var. sinensis HOM05D005091 ORTHO05D006047 2.0e-30 135.6 70 91.4
CSS0016397 Camellia sinensis var. sinensis HOM05D005091 ORTHO05D006047 4.4e-30 134.4 70 91.4
CSS0020327 Camellia sinensis var. sinensis HOM05D005091 ORTHO05D006047 1.3e-29 132.9 70 88.6
CSS0039319 Camellia sinensis var. sinensis HOM05D005091 ORTHO05D006047 4.9e-29 131.0 70 88.6
TAR625G0679 Trochodendron aralioides HOM05D005091 ORTHO05D006047 4.6e-27 124.4 66 83.3
Dinv42028 Davidia involucrata HOM05D005091 ORTHO05D006047 1.7e-26 122.5 70 81.4
Haze_02317 Corylus avellana HOM05D005091 ORTHO05D006047 5.1e-26 120.9 70 77.1
Actinidia02234 Actinidia chinensis HOM05D005091 ORTHO05D006047 6.6e-26 120.6 70 81.4
Hma1.2p1_0066F.1_g036020 Hydrangea macrophylla HOM05D005091 ORTHO05D006047 1.5e-25 119.4 70 78.6
Hma1.2p1_0066F.1_g036030 Hydrangea macrophylla HOM05D005091 ORTHO05D006047 1.5e-25 119.4 70 78.6
TWI79G0003 Tripterygium wilfordii HOM05D005091 ORTHO05D006047 1.5e-25 119.4 70 74.3
DCAR_004295 Daucus carota HOM05D005091 ORTHO05D006047 1.9e-25 119.0 70 78.6
QL11p045411 Quercus lobata HOM05D005091 ORTHO05D006047 5.6e-25 117.5 73 71.2
Ca_23899_v3 Cicer arietinum L. HOM05D005091 ORTHO05D006047 9.5e-25 116.7 70 74.3
Glyma.13G201900 Glycine max HOM05D005091 ORTHO05D006047 1.6e-24 115.9 70 72.9
Peaxi162Scf00016g00337 Petunia axillaris HOM05D005091 ORTHO05D006047 1.6e-24 115.9 70 74.3
MSTRG.16832 Avicennia marina HOM05D005091 ORTHO05D006047 2.1e-24 115.5 70 75.7
Lj3g0010610 Lotus japonicus HOM05D005091 ORTHO05D006047 2.1e-24 115.5 70 75.7
CiPaw.06G131700 Carya illinoinensis HOM05D005091 ORTHO05D006047 2.8e-24 115.2 66 75.8
Psat4g148720 Pisum sativum HOM05D005091 ORTHO05D006047 2.8e-24 115.2 70 71.4
GSVIVG01024219001 Vitis vinifera HOM05D005091 ORTHO05D006047 2.8e-24 115.2 70 75.7
Medtr8g037340 Medicago truncatula HOM05D005091 ORTHO05D006047 6.2e-24 114.0 70 71.4
Phvul.011G210700 Phaseolus vulgaris HOM05D005091 ORTHO05D006047 6.2e-24 114.0 70 72.9
TPR.G1894 Trifolium pratense HOM05D005091 ORTHO05D006047 8.1e-24 113.6 70 71.4
Eucgr.G01705 Eucalyptus grandis HOM05D005091 ORTHO05D006047 1.1e-23 113.2 70 74.3
MBI01_g12681_MAGBIO Magnolia biondii HOM05D005091 ORTHO05D006047 1.1e-23 113.2 66 74.2
Thecc.02G079100 Theobroma cacao HOM05D005091 ORTHO05D006047 1.1e-23 113.2 70 72.9
Migut.B00202 Erythranthe guttata HOM05D005091 ORTHO05D006047 2.3e-23 112.1 70 72.9
Glyma.12G236400 Glycine max HOM05D005091 ORTHO05D006047 3.1e-23 111.7 70 70.0
FAN20G0404 Fragaria x ananassa HOM05D005091 ORTHO05D006047 4.0e-23 111.3 70 71.4
Lalb_Chr03g0034131 Lupinus albus HOM05D005091 ORTHO05D006047 4.0e-23 111.3 70 71.4
Nn5g29154 Nelumbo nucifera HOM05D005091 ORTHO05D006047 4.0e-23 111.3 66 72.7
Oeu041611.2 Olea europaea HOM05D005091 ORTHO05D006047 4.0e-23 111.3 70 72.9
Ah.01g019050 Amaranthus hybridus HOM05D005091 ORTHO05D006047 5.2e-23 110.9 66 75.8
VMungo1127G0930 Vigna mungo HOM05D005091 ORTHO05D006047 5.2e-23 110.9 70 71.4
Cpa.g.sc150.55 Carica papaya HOM05D005091 ORTHO05D006047 6.8e-23 110.5 70 70.0
Nitab4.5_0009512g0060 Nicotiana tabacum HOM05D005091 ORTHO05D006047 6.8e-23 110.5 70 72.9
Hund06247 Selenicereus undatus HOM05D005091 ORTHO05D006047 6.8e-23 110.5 66 75.8
Aqoxy6G01233 Aquilegia oxysepala HOM05D005091 ORTHO05D006047 8.9e-23 110.2 66 72.7
CiPaw.05G070800 Carya illinoinensis HOM05D005091 ORTHO05D006047 8.9e-23 110.2 66 72.7
COL.COLO4_26004 Corchorus olitorius HOM05D005091 ORTHO05D006047 8.9e-23 110.2 70 71.4
FAN15G1732 Fragaria x ananassa HOM05D005091 ORTHO05D006047 8.9e-23 110.2 70 70.0
Solyc01g110030.3 Solanum lycopersicum HOM05D005091 ORTHO05D006047 8.9e-23 110.2 70 71.4
Sopen01g052220 Solanum pennellii HOM05D005091 ORTHO05D006047 8.9e-23 110.2 70 71.4
PGSC0003DMG400030963 Solanum tuberosum HOM05D005091 ORTHO05D006047 8.9e-23 110.2 70 71.4
RcHm_v2.0_Chr6g0266641 Rosa chinensis HOM05D005091 ORTHO05D006047 1.2e-22 109.8 70 70.0
Rhsim05G0070500 Rhododendron simsii HOM05D005091 ORTHO05D006047 1.5e-22 109.4 70 74.3
arahy.Tifrunner.gnm1.ann1.PP2YAD Arachis hypogaea HOM05D005091 ORTHO05D006047 2.0e-22 109.0 76 65.8
Gohir.D01G004000 Gossypium hirsutum HOM05D005091 ORTHO05D006047 2.0e-22 109.0 70 68.6
Gorai.002G004900 Gossypium raimondii HOM05D005091 ORTHO05D006047 2.0e-22 109.0 70 68.6
Atru.chr5.3102 Acer truncatum HOM05D005091 ORTHO05D006047 2.6e-22 108.6 70 71.4
arahy.Tifrunner.gnm1.ann1.6QR9E7 Arachis hypogaea HOM05D005091 ORTHO05D006047 2.6e-22 108.6 76 65.8
Duzib132G0651 Durio zibethinus HOM05D005091 ORTHO05D006047 2.6e-22 108.6 70 67.1
FvH4_2g09910 Fragaria vesca HOM05D005091 ORTHO05D006047 2.6e-22 108.6 70 68.6
FAN24G2910 Fragaria x ananassa HOM05D005091 ORTHO05D006047 2.6e-22 108.6 70 68.6
Nitab4.5_0005919g0020 Nicotiana tabacum HOM05D005091 ORTHO05D006047 3.4e-22 108.2 70 70.0
EL10Ac9g21684 Beta vulgaris HOM05D005091 ORTHO05D006047 4.4e-22 107.8 66 74.2
Potri.004G160000 Populus trichocarpa HOM05D005091 ORTHO05D006047 4.4e-22 107.8 70 70.0
CDE06G2285 Ceratophyllum demersum HOM05D005091 ORTHO05D006047 5.8e-22 107.5 66 75.8
AUR62010439 Chenopodium quinoa HOM05D005091 ORTHO05D006047 7.6e-22 107.1 66 74.2
Ciclev10028263m.g Citrus clementina HOM05D005091 ORTHO05D006047 7.6e-22 107.1 70 67.1
MD05G1059400 Malus domestica HOM05D005091 ORTHO05D006047 7.6e-22 107.1 66 72.7
PGR042G2402 Punica granatum HOM05D005091 ORTHO05D006047 7.6e-22 107.1 70 68.6
AUR62016783 Chenopodium quinoa HOM05D005091 ORTHO05D006047 9.9e-22 106.7 66 74.2
Lj5C193G6 Lonicera japonica HOM05D005091 ORTHO05D006047 9.9e-22 106.7 93 61.3
PSO541G2662 Papaver somniferum HOM05D005091 ORTHO05D006047 9.9e-22 106.7 66 71.2
PSO675G3543 Papaver somniferum HOM05D005091 ORTHO05D006047 9.9e-22 106.7 66 71.2
Gohir.A01G004000 Gossypium hirsutum HOM05D005091 ORTHO05D006047 1.7e-21 105.9 70 67.1
Cc02_g17150 Coffea canephora HOM05D005091 ORTHO05D006047 2.2e-21 105.5 70 67.1
Gohir.A04G124200 Gossypium hirsutum HOM05D005091 ORTHO05D006047 4.9e-21 104.4 70 67.1
Sabra04G0107000 Salix brachista HOM05D005091 ORTHO05D006047 4.9e-21 104.4 70 65.7
Prupe.8G089300 Prunus persica HOM05D005091 ORTHO05D006047 6.4e-21 104.0 70 67.1
vmacro17453 Vaccinium macrocarpon HOM05D005091 ORTHO05D006047 6.4e-21 104.0 70 75.7
CANSAT11G2456 Cannabis sativa HOM05D005091 ORTHO05D006047 1.1e-20 103.2 70 67.1
Gorai.012G154700 Gossypium raimondii HOM05D005091 ORTHO05D006047 1.4e-20 102.8 70 65.7
Manes.12G155700 Manihot esculenta HOM05D005091 ORTHO05D006047 1.4e-20 102.8 70 68.6
Oeu004806.3 Olea europaea HOM05D005091 ORTHO05D006047 1.9e-20 102.4 66 72.7
SalBow6G4139 Salvia bowleyana HOM05D005091 ORTHO05D006047 1.9e-20 102.4 70 65.7
ClCG11G004080 Citrullus lanatus HOM05D005091 ORTHO05D006047 4.1e-20 101.3 70 65.7
Gohir.D04G166300 Gossypium hirsutum HOM05D005091 ORTHO05D006047 4.1e-20 101.3 70 64.3
Lsat_1_v5_gn_7_91761 Lactuca sativa HOM05D005091 ORTHO05D006047 4.1e-20 101.3 70 64.3
Carub.0003s3018 Capsella rubella HOM05D005091 ORTHO05D006047 5.4e-20 100.9 101 52.5
CsaV3_2G015120 Cucumis sativus L. HOM05D005091 ORTHO05D006047 9.2e-20 100.1 70 64.3
unitig_21.g20796 Utricularia gibba HOM05D005091 ORTHO05D006047 9.2e-20 100.1 66 71.2
CARHR106660 Cardamine hirsuta HOM05D005091 ORTHO05D006047 1.6e-19 99.4 70 68.6
Aa31LG8G13770 Aethionema arabicum HOM05D005091 ORTHO05D006047 2.7e-19 98.6 70 65.7
ATR0665G578 Amborella trichopoda HOM05D005091 ORTHO05D006047 2.7e-19 98.6 66 68.2
MELO3C023337.2 Cucumis melo HOM05D005091 ORTHO05D006047 2.7e-19 98.6 66 66.7
AL3G52590 Arabidopsis lyrata HOM05D005091 ORTHO05D006047 4.6e-19 97.8 70 65.7
AT2G16405 Arabidopsis thaliana HOM05D005091 ORTHO05D006047 4.6e-19 97.8 70 65.7
Sp3g29690 Schrenkiella parvula HOM05D005091 ORTHO05D006047 6.0e-19 97.4 70 65.7
MD10G1067500 Malus domestica HOM05D005091 ORTHO05D006047 7.8e-19 97.1 64 67.2
Thhalv10022667m.g Eutrema salsugineum HOM05D005091 ORTHO05D006047 1.3e-18 96.3 70 67.1
Os01g0776400 Oryza sativa ssp. japonica HOM05D005091 ORTHO05D006047 1.3e-18 96.3 66 66.7
BcaB03g16352 Brassica carinata HOM05D005091 ORTHO05D006047 2.3e-18 95.5 70 67.1
BcaC06g36149 Brassica carinata HOM05D005091 ORTHO05D006047 2.3e-18 95.5 70 67.1
A07p04510 Brassica napus HOM05D005091 ORTHO05D006047 2.3e-18 95.5 70 67.1
C07p07220 Brassica napus HOM05D005091 ORTHO05D006047 2.3e-18 95.5 70 67.1
BolC7t41142H Brassica oleracea HOM05D005091 ORTHO05D006047 2.3e-18 95.5 70 67.1
BraA07t28242Z Brassica rapa HOM05D005091 ORTHO05D006047 2.3e-18 95.5 70 67.1
THA.LOC104807298 Tarenaya hassleriana HOM05D005091 ORTHO05D006047 2.3e-18 95.5 66 69.7
Sed0016950 Sechium edule HOM05D005091 ORTHO05D006047 3.9e-18 94.7 70 62.9
HPP92_010256 Vanilla planifolia HOM05D005091 ORTHO05D006047 3.9e-18 94.7 66 69.7
SEGI_12567 Sequoiadendron giganteum HOM05D005091 ORTHO05D006047 6.6e-18 94.0 66 60.6
SEGI_20344 Sequoiadendron giganteum HOM05D005091 ORTHO05D006047 6.6e-18 94.0 66 60.6
Lsat_1_v5_gn_9_107760 Lactuca sativa HOM05D005091 ORTHO05D006047 4.3e-17 91.3 66 63.6
ECA236G1753 Erigeron canadensis HOM05D005091 ORTHO05D006047 5.6e-17 90.9 70 57.1
HanXRQChr04g0127771 Helianthus annuus HOM05D005091 ORTHO05D006047 5.6e-17 90.9 70 57.1
Zm00001eb151660 Zea mays HOM05D005091 ORTHO05D006047 5.6e-17 90.9 66 66.7
MBI03_g43429_MAGBIO Magnolia biondii HOM05D005091 ORTHO05D006047 1.2e-14 83.2 50 72.0
HPP92_010449 Vanilla planifolia HOM05D005091 ORTHO05D006047 3.2e-12 75.1 66 59.1
TAR381G0064 Trochodendron aralioides HOM05D005091 ORTHO05D006047 7.1e-12 73.9 47 70.2
Mapoly0099s0024 Marchantia polymorpha HOM05D005091 ORTHO05D006047 1.3e-10 69.7 66 40.9
AagrBONN_evm.TU.Sc2ySwM_344.1521 Anthoceros agrestis HOM05D005091 ORTHO05D006047 5.1e-10 67.8 70 42.9
SGA_v2.0_scaffold58G20494 Striga asiatica HOM05D005091 ORTHO05D006047 5.6e-09 64.3 36 77.8
SMO232G0022 Selaginella moellendorffii HOM05D005091 ORTHO05D006047 9.6e-09 63.5 66 42.4
Sc08g0000700 Simmondsia chinensis HOM05D005091 ORTHO05D006047 1.6e-08 62.8 32 87.5
Pp3c21_5350 Physcomitrium patens HOM05D005091 ORTHO05D006047 5.3e-07 57.8 73 41.1
CBR_g20107 Chara braunii HOM05D005091 ORTHO05D006047 6.9e-07 57.4 67 41.8
RcHm_v2.0_Chr6g0266811 Rosa chinensis HOM05D005091 ORTHO05D006047 1.2e-06 56.6 89 41.6


User provided reference genes

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