Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046654 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.1e-65 252.3 135 100.0
CSS0048436 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.4e-61 238.8 135 95.6
CSS0008280 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.1e-58 229.9 135 91.9
CSS0015628 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.9e-58 229.2 134 91.8
CSS0008104 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.4e-56 223.0 135 89.6
CSS0030227 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.6e-55 218.8 135 89.6
CSS0025185 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 3.4e-55 218.4 135 89.6
CSS0039010 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 5.8e-55 217.6 133 88.0
CSS0004656 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.9e-54 215.3 131 88.5
CSS0022599 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.5e-50 203.0 135 85.2
Cpa.g.sc53.120 Carica papaya HOM05D008138 ORTHO05D010043 1.9e-13 79.7 98 42.9
Sed0002378 Sechium edule HOM05D008138 ORTHO05D010043 3.5e-12 75.5 107 43.0
Thecc.02G319500 Theobroma cacao HOM05D008138 ORTHO05D010043 6.0e-12 74.7 102 41.2
GSVIVG01010138001 Vitis vinifera HOM05D008138 ORTHO05D010043 6.0e-12 74.7 94 50.0
GSVIVG01010131001 Vitis vinifera HOM05D008138 ORTHO05D010043 1.0e-11 73.9 104 44.2
RhsimUnG0062800 Rhododendron simsii HOM05D009462 ORTHO05D013623 2.3e-11 72.8 73 52.1
RhsimUnG0060000 Rhododendron simsii HOM05D009462 ORTHO05D013623 8.7e-11 70.9 74 51.4
ClCG05G023400 Citrullus lanatus HOM05D008138 ORTHO05D010043 1.5e-10 70.1 109 40.4
Lj2g0015438 Lotus japonicus HOM05D008138 ORTHO05D010043 3.3e-10 68.9 94 44.7
RhsimUnG0090300 Rhododendron simsii HOM05D009462 ORTHO05D013623 7.4e-10 67.8 124 37.1
RhsimUnG0090100 Rhododendron simsii HOM05D009462 ORTHO05D013623 9.6e-10 67.4 76 47.4
ClCG01G007380 Citrullus lanatus HOM05D022360 ORTHO05D010043 1.6e-09 66.6 110 42.7
CsaV3_5G018850 Cucumis sativus L. HOM05D022360 ORTHO05D034989 2.1e-09 66.2 94 44.7
Sed0011337 Sechium edule HOM05D022360 ORTHO05D010043 2.1e-09 66.2 99 42.4
TAR629G0219 Trochodendron aralioides HOM05D008138 ORTHO05D010043 4.8e-09 65.1 113 36.3
Glyma.01G069000 Glycine max HOM05D008138 ORTHO05D010043 8.2e-09 64.3 93 39.8
Nn4g23585 Nelumbo nucifera HOM05D008138 ORTHO05D010043 1.4e-08 63.5 97 37.1
Potri.013G126000 Populus trichocarpa HOM05D008138 ORTHO05D010043 1.4e-08 63.5 98 43.9
Nn3g17583 Nelumbo nucifera HOM05D008138 ORTHO05D010043 1.8e-08 63.2 103 35.0
RhsimUnG0175000 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.8e-08 63.2 95 41.1
RhsimUnG0201100 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.8e-08 63.2 75 45.3
RhsimUnG0204000 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.8e-08 63.2 75 48.0
RhsimUnG0201400 Rhododendron simsii HOM05D009462 ORTHO05D013623 4.0e-08 62.0 116 40.5
Glyma.02G125900 Glycine max HOM05D008138 ORTHO05D010043 6.9e-08 61.2 93 37.6
Cpa.g.sc9.360 Carica papaya HOM05D008138 ORTHO05D010043 9.0e-08 60.8 89 37.1
RhsimUnG0216100 Rhododendron simsii HOM05D009462 ORTHO05D013623 9.0e-08 60.8 122 37.7
QL10p055344 Quercus lobata HOM05D008138 ORTHO05D010043 1.2e-07 60.5 87 39.1
RhsimUnG0222200 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.2e-07 60.5 114 39.5
RhsimUnG0060400 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.5e-07 60.1 117 39.3
RhsimUnG0203600 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.5e-07 60.1 113 38.9
TPR.G2576 Trifolium pratense HOM05D008138 ORTHO05D010043 2.6e-07 59.3 99 38.4
Rhsim09G0118100 Rhododendron simsii HOM05D008138 ORTHO05D010043 3.4e-07 58.9 103 38.8
Eucgr.G01572 Eucalyptus grandis HOM05D008138 ORTHO05D010043 4.5e-07 58.5 102 37.3
Eucgr.G02403 Eucalyptus grandis HOM05D008138 ORTHO05D010043 5.8e-07 58.2 102 37.3
RhsimUnG0012100 Rhododendron simsii HOM05D009462 ORTHO05D013623 5.8e-07 58.2 127 33.9
RhsimUnG0108600 Rhododendron simsii HOM05D009462 ORTHO05D013623 5.8e-07 58.2 127 33.9
Ciclev10022615m.g Citrus clementina HOM05D017113 ORTHO05D019028 1.0e-06 57.4 114 36.0
Ciclev10022667m.g Citrus clementina HOM05D017113 ORTHO05D019028 1.3e-06 57.0 112 35.7
Eucgr.G01398 Eucalyptus grandis HOM05D008138 ORTHO05D010043 2.2e-06 56.2 96 36.5
Ciclev10022611m.g Citrus clementina HOM05D017113 ORTHO05D019028 2.9e-06 55.8 114 36.0
Rhsim09G0118800 Rhododendron simsii HOM05D008138 ORTHO05D010043 2.9e-06 55.8 99 39.4
Atru.chr4.1346 Acer truncatum HOM05D058995 ORTHO05D010043 3.8e-06 55.5 123 34.1
TAR629G0644 Trochodendron aralioides HOM05D008138 ORTHO05D010043 3.8e-06 55.5 97 35.1
QL10p055339 Quercus lobata HOM05D008138 ORTHO05D010043 6.5e-06 54.7 98 33.7
Manes.04G036300 Manihot esculenta HOM05D008138 ORTHO05D010043 8.4e-06 54.3 98 34.7


User provided reference genes

Program Settings