Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 9.8e-75 283.5 154 100.0
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 9.8e-75 283.5 154 100.0
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 7.0e-65 250.8 158 88.6
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.5e-62 243.0 146 93.8
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 2.9e-50 202.2 155 76.8
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 7.8e-48 194.1 160 71.9
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 1.1e-44 183.7 156 71.2
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 1.8e-44 183.0 162 69.8
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 5.2e-44 181.4 158 69.6
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 3.4e-43 178.7 160 70.6
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 2.9e-42 175.6 158 69.6
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 6.4e-42 174.5 158 69.0
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 2.4e-41 172.6 157 68.2
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 9.2e-41 170.6 154 68.8
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 9.2e-41 170.6 153 71.2
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 1.2e-40 170.2 158 67.7
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 4.6e-40 168.3 156 68.6
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 1.3e-39 166.8 159 66.7
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 2.3e-39 166.0 160 66.9
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 3.0e-39 165.6 158 66.5
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 5.1e-39 164.9 159 64.8
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 8.6e-39 164.1 158 66.5
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 1.1e-38 163.7 147 69.4
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 2.5e-38 162.5 158 67.1
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 2.5e-38 162.5 156 69.2
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 4.3e-38 161.8 160 63.1
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 4.3e-38 161.8 153 66.7
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 5.6e-38 161.4 151 66.9
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 5.6e-38 161.4 159 65.4
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 9.5e-38 160.6 112 83.0
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 1.2e-37 160.2 151 66.2
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 1.2e-37 160.2 155 63.9
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 1.6e-37 159.8 103 89.3
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 3.6e-37 158.7 151 66.2
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 3.6e-37 158.7 151 66.2
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 6.2e-37 157.9 151 65.6
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 6.2e-37 157.9 151 65.6
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 6.2e-37 157.9 154 65.6
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 6.2e-37 157.9 149 65.8
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 1.1e-36 157.1 152 67.1
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 1.4e-36 156.8 154 64.9
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 1.4e-36 156.8 151 67.5
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 1.8e-36 156.4 103 83.5
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 1.8e-36 156.4 195 56.9
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 2.3e-36 156.0 151 65.6
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 5.2e-36 154.8 156 61.5
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 5.2e-36 154.8 156 64.7
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 8.9e-36 154.1 151 62.9
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 1.2e-35 153.7 103 84.5
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 1.2e-35 153.7 155 63.2
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 1.5e-35 153.3 159 62.9
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 2.0e-35 152.9 165 53.3
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 4.4e-35 151.8 151 64.9
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 5.8e-35 151.4 155 65.2
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 5.8e-35 151.4 160 60.0
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 1.7e-34 149.8 153 61.4
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 2.2e-34 149.4 151 64.9
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 2.2e-34 149.4 152 67.8
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 2.2e-34 149.4 127 63.8
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 2.9e-34 149.1 158 61.4
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 3.7e-34 148.7 105 79.0
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 4.9e-34 148.3 106 82.1
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 4.9e-34 148.3 153 62.1
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 6.4e-34 147.9 151 60.9
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 6.4e-34 147.9 159 62.3
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 2.4e-33 146.0 151 61.6
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 2.4e-33 146.0 100 84.0
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 2.4e-33 146.0 150 62.0
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 3.2e-33 145.6 157 65.0
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 3.2e-33 145.6 149 60.4
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 5.4e-33 144.8 125 70.4
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 9.2e-33 144.1 110 73.6
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 1.2e-32 143.7 151 60.3
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 1.2e-32 143.7 110 73.6
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 1.6e-32 143.3 154 60.4
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 1.6e-32 143.3 108 79.6
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 2.1e-32 142.9 152 61.2
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 3.5e-32 142.1 99 84.8
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 3.5e-32 142.1 98 83.7
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 3.5e-32 142.1 152 62.5
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 1.7e-31 139.8 104 79.8
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 1.7e-31 139.8 101 80.2
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 2.3e-31 139.4 112 72.3
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 5.1e-31 138.3 104 78.8
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 6.6e-31 137.9 154 58.4
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 6.6e-31 137.9 106 78.3
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 8.6e-31 137.5 110 74.5
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 8.6e-31 137.5 145 60.7
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 1.1e-30 137.1 109 75.2
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 1.9e-30 136.3 108 75.9
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 4.3e-30 135.2 100 79.0
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 1.2e-29 133.7 149 59.7
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 1.5e-27 126.7 70 78.6
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 2.0e-27 126.3 94 79.8
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 1.1e-25 120.6 101 71.3
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 5.4e-25 118.2 98 72.4
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 7.1e-25 117.9 153 56.2
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 9.3e-25 117.5 80 85.0
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 1.0e-23 114.0 75 86.7
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 6.6e-23 111.3 75 86.7
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 6.6e-23 111.3 91 69.2
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 8.7e-23 110.9 89 70.8
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 2.4e-20 102.8 83 71.1
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 9.0e-20 100.9 89 62.9
Gohir.A05G061100 Gossypium hirsutum HOM05D007253 ORTHO05D009055 3.0e-15 85.9 97 52.6
CsaV3_4G036390 Cucumis sativus L. HOM05D018710 ORTHO05D009055 1.9e-09 66.6 97 47.4
Haze_21370 Corylus avellana HOM05D007253 ORTHO05D009055 2.4e-09 66.2 90 47.8
Rhsim07G0166900 Rhododendron simsii HOM05D018710 ORTHO05D023780 3.2e-09 65.9 84 51.2
Cfa013009 Carpinus fangiana HOM05D018710 ORTHO05D009055 4.2e-09 65.5 78 51.3
QL02p017999 Quercus lobata HOM05D007253 ORTHO05D009055 1.1e-06 57.4 73 52.1
Hma1.2p1_0022F.1_g014850 Hydrangea macrophylla HOM05D007253 ORTHO05D009055 3.3e-06 55.8 33 84.8
Sabra18G0019900 Salix brachista HOM05D018710 ORTHO05D023780 5.6e-06 55.1 97 41.2


User provided reference genes

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