Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043795 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 4.2e-74 281.2 133 100.0
CSS0046602 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 4.2e-74 281.2 133 100.0
Aqoxy1G00759 Aquilegia oxysepala HOM05D005457 ORTHO05D006350 1.1e-34 150.2 85 82.4
CSS0049881 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 3.2e-34 148.7 77 85.7
Sed0019872 Sechium edule HOM05D005457 ORTHO05D006350 3.2e-34 148.7 85 80.0
Ciclev10027683m.g Citrus clementina HOM05D005457 ORTHO05D006350 4.2e-34 148.3 77 87.0
CiPaw.13G084000 Carya illinoinensis HOM05D005457 ORTHO05D006350 5.5e-34 147.9 72 90.3
QL01p028955 Quercus lobata HOM05D005457 ORTHO05D006350 5.5e-34 147.9 72 88.9
Rhsim13G0075000 Rhododendron simsii HOM05D005457 ORTHO05D006350 7.2e-34 147.5 81 80.2
Dinv34321 Davidia involucrata HOM05D005457 ORTHO05D006350 9.4e-34 147.1 77 84.4
Gohir.A03G047700 Gossypium hirsutum HOM05D005457 ORTHO05D006350 9.4e-34 147.1 80 82.5
Gohir.D03G119400 Gossypium hirsutum HOM05D005457 ORTHO05D006350 9.4e-34 147.1 80 82.5
Gorai.003G125700 Gossypium raimondii HOM05D005457 ORTHO05D006350 9.4e-34 147.1 80 82.5
Thecc.09G309000 Theobroma cacao HOM05D005457 ORTHO05D006350 9.4e-34 147.1 85 78.8
Dinv17076 Davidia involucrata HOM05D005457 ORTHO05D006350 1.2e-33 146.7 72 88.9
Dinv43020 Davidia involucrata HOM05D005457 ORTHO05D006350 1.2e-33 146.7 72 88.9
Dinv43077 Davidia involucrata HOM05D005457 ORTHO05D006350 1.2e-33 146.7 72 88.9
MD03G1079900 Malus domestica HOM05D005457 ORTHO05D006350 1.2e-33 146.7 86 77.9
Lj2C1073G13 Lonicera japonica HOM05D005457 ORTHO05D006350 1.6e-33 146.4 77 83.1
PSO170G6745 Papaver somniferum HOM05D005457 ORTHO05D006350 1.6e-33 146.4 77 83.1
PSO782G3368 Papaver somniferum HOM05D005457 ORTHO05D006350 1.6e-33 146.4 77 83.1
Atru.chr3.4038 Acer truncatum HOM05D005457 ORTHO05D006350 2.1e-33 146.0 86 76.7
TAR369G0749 Trochodendron aralioides HOM05D005457 ORTHO05D006350 2.1e-33 146.0 77 84.4
Haze_24232 Corylus avellana HOM05D005457 ORTHO05D006350 2.7e-33 145.6 72 87.5
MD11G1084500 Malus domestica HOM05D005457 ORTHO05D006350 2.7e-33 145.6 69 91.3
Medtr4g037575 Medicago truncatula HOM05D005457 ORTHO05D006350 2.7e-33 145.6 72 86.1
ClCG03G001030 Citrullus lanatus HOM05D005457 ORTHO05D006350 3.6e-33 145.2 72 88.9
CsaV3_1G035890 Cucumis sativus L. HOM05D005457 ORTHO05D006350 3.6e-33 145.2 72 88.9
RcHm_v2.0_Chr5g0067371 Rosa chinensis HOM05D005457 ORTHO05D006350 3.6e-33 145.2 77 83.1
TAR623G1178 Trochodendron aralioides HOM05D005457 ORTHO05D006350 3.6e-33 145.2 77 83.1
FvH4_3g37470 Fragaria vesca HOM05D005457 ORTHO05D006350 4.7e-33 144.8 72 87.5
FAN11G1716 Fragaria x ananassa HOM05D005457 ORTHO05D006350 4.7e-33 144.8 72 87.5
FAN25G1264 Fragaria x ananassa HOM05D005457 ORTHO05D006350 4.7e-33 144.8 72 87.5
Nn2g11331 Nelumbo nucifera HOM05D005457 ORTHO05D006350 4.7e-33 144.8 77 81.8
SHI05894 Sapria himalayana HOM05D005457 ORTHO05D006350 4.7e-33 144.8 69 91.3
vmacro03007 Vaccinium macrocarpon HOM05D005457 ORTHO05D006350 4.7e-33 144.8 72 86.1
Hma1.2p1_0543F.1_g175290 Hydrangea macrophylla HOM05D005457 ORTHO05D006350 6.1e-33 144.4 77 80.5
Psat7g154880 Pisum sativum HOM05D005457 ORTHO05D006350 6.1e-33 144.4 77 81.8
Gorai.003G125900 Gossypium raimondii HOM05D005457 ORTHO05D006350 8.0e-33 144.1 77 83.1
Lalb_Chr01g0000381 Lupinus albus HOM05D005457 ORTHO05D006350 8.0e-33 144.1 69 89.9
Nn2g13569 Nelumbo nucifera HOM05D005457 ORTHO05D006350 8.0e-33 144.1 77 81.8
GSVIVG01024823001 Vitis vinifera HOM05D005457 ORTHO05D006350 8.0e-33 144.1 77 81.8
FAN21G0431 Fragaria x ananassa HOM05D005457 ORTHO05D006350 1.0e-32 143.7 72 86.1
Ca_19579_v3 Cicer arietinum L. HOM05D005457 ORTHO05D006350 1.4e-32 143.3 72 84.7
arahy.Tifrunner.gnm1.ann1.L17SH6 Arachis hypogaea HOM05D005457 ORTHO05D006350 1.8e-32 142.9 69 88.4
arahy.Tifrunner.gnm1.ann1.U9UY67 Arachis hypogaea HOM05D005457 ORTHO05D006350 1.8e-32 142.9 69 88.4
FAN16G3594 Fragaria x ananassa HOM05D005457 ORTHO05D006350 1.8e-32 142.9 72 86.1
Lj3g0007084 Lotus japonicus HOM05D005457 ORTHO05D006350 1.8e-32 142.9 69 88.4
TPR.G3642 Trifolium pratense HOM05D005457 ORTHO05D006350 1.8e-32 142.9 69 88.4
Cpa.g.sc112.89 Carica papaya HOM05D005457 ORTHO05D006350 2.3e-32 142.5 77 81.8
Glyma.09G228800 Glycine max HOM05D005457 ORTHO05D006350 2.3e-32 142.5 69 88.4
Glyma.12G007800 Glycine max HOM05D005457 ORTHO05D006350 2.3e-32 142.5 69 88.4
VMungo1127G1417 Vigna mungo HOM05D005457 ORTHO05D006350 2.3e-32 142.5 69 88.4
Lj1C143T9 Lonicera japonica HOM05D005457 ORTHO05D006350 3.0e-32 142.1 77 79.2
Manes.02G123500 Manihot esculenta HOM05D005457 ORTHO05D006350 3.0e-32 142.1 71 87.3
Gohir.A03G047600 Gossypium hirsutum HOM05D005457 ORTHO05D006350 4.0e-32 141.7 77 81.8
Sabra09G0028400 Salix brachista HOM05D005457 ORTHO05D006350 4.0e-32 141.7 72 84.7
Lsat_1_v5_gn_9_25441 Lactuca sativa HOM05D005457 ORTHO05D006350 6.8e-32 141.0 69 88.4
Phvul.011G009900 Phaseolus vulgaris HOM05D005457 ORTHO05D006350 6.8e-32 141.0 69 88.4
Potri.001G247100 Populus trichocarpa HOM05D005457 ORTHO05D006350 6.8e-32 141.0 72 84.7
Prupe.6G064800 Prunus persica HOM05D005457 ORTHO05D006350 6.8e-32 141.0 72 83.3
Gohir.D03G119500 Gossypium hirsutum HOM05D005457 ORTHO05D006350 8.8e-32 140.6 77 81.8
DCAR_027735 Daucus carota HOM05D005457 ORTHO05D006350 1.5e-31 139.8 72 86.1
COL.COLO4_19073 Corchorus olitorius HOM05D005457 ORTHO05D006350 2.6e-31 139.0 69 87.0
Hund11609 Selenicereus undatus HOM05D005457 ORTHO05D006350 2.6e-31 139.0 80 76.2
Sc12g0001060 Simmondsia chinensis HOM05D005457 ORTHO05D006350 3.4e-31 138.7 69 85.5
Zm00001eb358910 Zea mays HOM05D005457 ORTHO05D006350 1.3e-30 136.7 69 85.5
AUR62001711 Chenopodium quinoa HOM05D005457 ORTHO05D006350 1.7e-30 136.3 85 71.8
ECA247G2917 Erigeron canadensis HOM05D005457 ORTHO05D006350 1.7e-30 136.3 77 76.6
HanXRQChr08g0237081 Helianthus annuus HOM05D005457 ORTHO05D006350 1.7e-30 136.3 69 84.1
DCAR_027739 Daucus carota HOM05D005457 ORTHO05D006350 2.8e-30 135.6 72 80.6
Zm00001eb159160 Zea mays HOM05D005457 ORTHO05D006350 2.8e-30 135.6 72 81.9
Ah.14g082630 Amaranthus hybridus HOM05D005457 ORTHO05D006350 3.7e-30 135.2 69 82.6
EL10Ac7g16099 Beta vulgaris HOM05D005457 ORTHO05D006350 4.8e-30 134.8 80 73.8
THA.LOC104799410 Tarenaya hassleriana HOM05D005457 ORTHO05D006350 1.8e-29 132.9 69 84.1
HPP92_001490 Vanilla planifolia HOM05D005457 ORTHO05D006350 2.4e-29 132.5 72 79.2
DCAR_027737 Daucus carota HOM05D005457 ORTHO05D006350 4.1e-29 131.7 72 79.2
MBI14_g32924_MAGBIO Magnolia biondii HOM05D005457 ORTHO05D006350 2.7e-28 129.0 69 79.7
Cc00_g21960 Coffea canephora HOM05D005457 ORTHO05D006350 2.2e-27 125.9 72 72.2
ATR0618G328 Amborella trichopoda HOM05D005457 ORTHO05D006350 3.8e-27 125.2 69 76.8
CAN.G1002.16 Capsicum annuum HOM05D005457 ORTHO05D006350 4.2e-26 121.7 85 63.5
Solyc09g031650.3 Solanum lycopersicum HOM05D005457 ORTHO05D006350 7.2e-26 120.9 85 61.2
Sopen09g014590 Solanum pennellii HOM05D005457 ORTHO05D006350 7.2e-26 120.9 85 61.2
Nitab4.5_0000752g0010 Nicotiana tabacum HOM05D005457 ORTHO05D006350 1.2e-25 120.2 72 69.4
Nitab4.5_0006476g0010 Nicotiana tabacum HOM05D005457 ORTHO05D006350 1.2e-25 120.2 72 69.4
Peaxi162Scf00433g00116 Petunia axillaris HOM05D005457 ORTHO05D006350 1.2e-25 120.2 72 69.4
Oeu002456.1 Olea europaea HOM05D005457 ORTHO05D006350 3.6e-25 118.6 80 62.5
SalBow2G3533 Salvia bowleyana HOM05D005457 ORTHO05D006350 4.7e-25 118.2 69 71.0
SGA_v2.0_scaffold199G41161 Striga asiatica HOM05D005457 ORTHO05D006350 1.5e-23 113.2 69 68.1
A03p11920 Brassica napus HOM05D005457 ORTHO05D006350 3.7e-22 108.6 72 63.9
Migut.N00905 Erythranthe guttata HOM05D005457 ORTHO05D006350 1.4e-21 106.7 77 58.4
BcaB08g36300 Brassica carinata HOM05D012589 ORTHO05D006350 1.2e-20 103.6 126 47.6
BolC3t13849H Brassica oleracea HOM05D005457 ORTHO05D006350 1.2e-20 103.6 69 65.2
CDE09G0137 Ceratophyllum demersum HOM05D000076 ORTHO05D001377 1.8e-13 79.7 54 64.8
BraA03t10504Z Brassica rapa HOM05D005457 ORTHO05D006350 8.6e-11 70.9 68 51.5
BcaB01g04624 Brassica carinata HOM05D005457 ORTHO05D006350 1.0e-08 63.9 50 56.0
Actinidia08559 Actinidia chinensis HOM05D005457 ORTHO05D006350 3.1e-08 62.4 79 45.6
Duzib170G0080 Durio zibethinus HOM05D005457 ORTHO05D006350 2.2e-06 56.2 110 38.2
CBR_g49555 Chara braunii HOM05D005457 ORTHO05D006350 4.9e-06 55.1 59 33.9


User provided reference genes

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