Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046587 Camellia sinensis var. sinensis HOM05D006932 ORTHO05D014708 1.5e-43 179.1 87 100.0
RhsimUnG0065200 Rhododendron simsii HOM05D006932 ORTHO05D009616 1.7e-15 85.9 64 68.8
Actinidia37937 Actinidia chinensis HOM05D006932 ORTHO05D009616 4.6e-13 77.8 64 68.8
Lj4C22G4 Lonicera japonica HOM05D006932 ORTHO05D009616 6.0e-13 77.4 64 62.5
TAR628G0089 Trochodendron aralioides HOM05D006932 ORTHO05D009616 2.3e-12 75.5 64 60.9
Dinv31864 Davidia involucrata HOM05D006932 ORTHO05D009616 3.9e-12 74.7 80 55.0
vmacro04363 Vaccinium macrocarpon HOM05D006932 ORTHO05D014708 8.7e-12 73.6 64 65.6
FvH4_2g38240 Fragaria vesca HOM05D006932 ORTHO05D009616 2.1e-10 68.9 63 57.1
TWI56G1403 Tripterygium wilfordii HOM05D006932 ORTHO05D009616 2.1e-10 68.9 63 58.7
FAN27G2636 Fragaria x ananassa HOM05D006932 ORTHO05D009616 1.8e-09 65.9 62 54.8
Nitab4.5_0000337g0050 Nicotiana tabacum HOM05D006932 ORTHO05D009616 2.4e-09 65.5 61 55.7
Nitab4.5_0003251g0090 Nicotiana tabacum HOM05D006932 ORTHO05D009616 2.4e-09 65.5 64 56.2
GSVIVG01009937001 Vitis vinifera HOM05D006932 ORTHO05D014708 6.9e-09 63.9 80 45.0
FAN20G1755 Fragaria x ananassa HOM05D006932 ORTHO05D009616 1.2e-08 63.2 62 54.8
FAN15G2452 Fragaria x ananassa HOM05D006932 ORTHO05D009616 1.5e-08 62.8 62 54.8
RcHm_v2.0_Chr6g0303131 Rosa chinensis HOM05D006932 ORTHO05D009616 2.0e-08 62.4 85 43.5
Potri.013G068501 Populus trichocarpa HOM05D006932 ORTHO05D009616 2.6e-08 62.0 65 55.4
Eucgr.H00968 Eucalyptus grandis HOM05D006932 ORTHO05D014708 7.6e-08 60.5 62 51.6
Atru.chr13.264 Acer truncatum HOM05D006932 ORTHO05D014708 9.9e-08 60.1 55 60.0
Cpa.g.sc26.311 Carica papaya HOM05D006932 ORTHO05D014708 6.4e-07 57.4 50 54.0
Peaxi162Scf00553g00219 Petunia axillaris HOM05D006932 ORTHO05D014708 1.9e-06 55.8 62 53.2
Hund05180 Selenicereus undatus HOM05D006932 ORTHO05D009616 2.4e-06 55.5 59 47.5
CAN.G6.34 Capsicum annuum HOM05D006932 ORTHO05D009616 4.2e-06 54.7 42 66.7
DCAR_019767 Daucus carota HOM05D002235 ORTHO05D006252 5.4e-06 54.3 58 50.0
Duzib093G0008 Durio zibethinus HOM05D006932 ORTHO05D009616 5.4e-06 54.3 61 49.2
MBI09_g14155_MAGBIO Magnolia biondii HOM05D025692 ORTHO05D014708 7.1e-06 53.9 61 52.5
PSO170G2579 Papaver somniferum HOM05D006932 ORTHO05D009616 9.3e-06 53.5 41 61.0


User provided reference genes

Program Settings