Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046586 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 6.3e-179 630.6 298 100.0
CSS0036233 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 2.3e-165 585.5 298 94.3
Actinidia39582 Actinidia chinensis HOM05D005657 ORTHO05D007104 9.2e-138 493.8 310 75.5
Gohir.D05G150300 Gossypium hirsutum HOM05D005657 ORTHO05D007104 1.4e-122 443.4 314 67.2
Gorai.009G154400 Gossypium raimondii HOM05D005657 ORTHO05D007104 5.4e-122 441.4 314 66.9
Gohir.A05G147800 Gossypium hirsutum HOM05D005657 ORTHO05D007104 9.2e-122 440.7 314 67.2
Cfa000932 Carpinus fangiana HOM05D005657 ORTHO05D007104 3.0e-120 435.6 319 64.9
vmacro10957 Vaccinium macrocarpon HOM05D005657 ORTHO05D007104 1.1e-119 433.7 360 61.7
CiPaw.09G122400 Carya illinoinensis HOM05D005657 ORTHO05D007104 4.3e-119 431.8 317 64.0
SalBow8G0891 Salvia bowleyana HOM05D005657 ORTHO05D007104 9.6e-119 430.6 315 65.4
Nitab4.5_0000484g0050 Nicotiana tabacum HOM05D005657 ORTHO05D007104 6.8e-117 424.5 313 65.8
Ciclev10015992m.g Citrus clementina HOM05D005657 ORTHO05D007104 8.9e-117 424.1 316 65.2
PGSC0003DMG401013075 Solanum tuberosum HOM05D005657 ORTHO05D007104 2.0e-116 422.9 320 63.8
Solyc05g053950.4 Solanum lycopersicum HOM05D005657 ORTHO05D007104 9.9e-116 420.6 320 64.1
Sopen05g032420 Solanum pennellii HOM05D005657 ORTHO05D007104 1.3e-115 420.2 318 64.2
PGR031G0971 Punica granatum HOM05D005657 ORTHO05D007104 2.9e-115 419.1 313 64.5
Thecc.06G148800 Theobroma cacao HOM05D005657 ORTHO05D007104 4.9e-115 418.3 314 64.3
Duzib192G0691 Durio zibethinus HOM05D005657 ORTHO05D007104 1.1e-114 417.2 330 63.3
Hma1.2p1_0020F.1_g014110 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 1.4e-114 416.8 315 64.4
Eucgr.E01441 Eucalyptus grandis HOM05D005657 ORTHO05D007104 7.1e-114 414.5 321 62.6
GSVIVG01021513001 Vitis vinifera HOM05D005657 ORTHO05D007104 2.7e-113 412.5 319 61.1
MSTRG.16252 Avicennia marina HOM05D005657 ORTHO05D007104 3.5e-113 412.1 314 63.1
HanXRQChr16g0525711 Helianthus annuus HOM05D005657 ORTHO05D007104 4.6e-113 411.8 308 64.3
TWI53G0207 Tripterygium wilfordii HOM05D005657 ORTHO05D007104 4.6e-113 411.8 315 63.2
QL05p057428 Quercus lobata HOM05D005657 ORTHO05D007104 1.0e-112 410.6 319 63.0
DCAR_007885 Daucus carota HOM05D005657 ORTHO05D007104 1.3e-112 410.2 308 63.0
CAN.G1744.1 Capsicum annuum HOM05D005657 ORTHO05D007104 1.7e-112 409.8 318 64.2
MD05G1282500 Malus domestica HOM05D005657 ORTHO05D007104 2.3e-112 409.5 314 64.6
FAN21G3134 Fragaria x ananassa HOM05D005657 ORTHO05D007104 5.1e-112 408.3 310 64.8
Lj6g0016438 Lotus japonicus HOM05D005657 ORTHO05D007104 6.6e-112 407.9 317 61.2
Cc07_g20130 Coffea canephora HOM05D005657 ORTHO05D007104 4.3e-111 405.2 310 61.3
FvH4_3g05380 Fragaria vesca HOM05D005657 ORTHO05D007104 7.3e-111 404.4 310 64.2
Lalb_Chr18g0055371 Lupinus albus HOM05D005657 ORTHO05D007104 9.6e-111 404.1 319 60.2
Haze_05617 Corylus avellana HOM05D005657 ORTHO05D007104 1.3e-110 403.7 352 57.4
Glyma.13G219000 Glycine max HOM05D005657 ORTHO05D007104 1.6e-110 403.3 318 60.7
RcHm_v2.0_Chr5g0014371 Rosa chinensis HOM05D005657 ORTHO05D007104 2.8e-110 402.5 311 64.3
TAR626G1592 Trochodendron aralioides HOM05D005657 ORTHO05D007104 3.6e-110 402.1 316 59.5
FAN16G0196 Fragaria x ananassa HOM05D005657 ORTHO05D007104 6.2e-110 401.4 310 63.9
Oeu042460.1 Olea europaea HOM05D005657 ORTHO05D007104 6.2e-110 401.4 316 63.0
ClCG01G024690 Citrullus lanatus HOM05D005657 ORTHO05D007104 5.3e-109 398.3 315 59.7
Potri.011G084000 Populus trichocarpa HOM05D005657 ORTHO05D007104 7.6e-108 394.4 311 64.6
Lsat_1_v5_gn_4_29400 Lactuca sativa HOM05D005657 ORTHO05D007104 1.7e-107 393.3 316 60.4
arahy.Tifrunner.gnm1.ann1.1GZ3A6 Arachis hypogaea HOM05D005657 ORTHO05D007104 4.9e-107 391.7 306 60.5
arahy.Tifrunner.gnm1.ann1.PL5EIV Arachis hypogaea HOM05D005657 ORTHO05D007104 2.4e-106 389.4 306 60.5
VMungo0540G0312 Vigna mungo HOM05D005657 ORTHO05D007104 2.4e-106 389.4 317 59.6
Ca_00535_v3 Cicer arietinum L. HOM05D005657 ORTHO05D007104 3.2e-106 389.0 317 58.7
Prupe.4G082300 Prunus persica HOM05D005657 ORTHO05D007104 5.4e-106 388.3 311 61.4
Sabra11G0066600 Salix brachista HOM05D005657 ORTHO05D007104 5.4e-106 388.3 311 63.3
Nn4g26588 Nelumbo nucifera HOM05D005657 ORTHO05D007104 4.6e-105 385.2 313 61.0
CANSAT35G1510 Cannabis sativa HOM05D005657 ORTHO05D007104 1.3e-104 383.6 308 60.7
Medtr2g019220 Medicago truncatula HOM05D005657 ORTHO05D007104 3.0e-104 382.5 318 57.9
Rhsim02G0159200 Rhododendron simsii HOM05D005657 ORTHO05D007104 3.0e-104 382.5 322 61.8
Psat1g188200 Pisum sativum HOM05D005657 ORTHO05D007104 1.5e-103 380.2 317 58.0
Aqoxy1G01688 Aquilegia oxysepala HOM05D005657 ORTHO05D007104 2.5e-103 379.4 324 58.3
CsaV3_6G051800 Cucumis sativus L. HOM05D005657 ORTHO05D007104 2.5e-103 379.4 318 58.2
AT1G30130 Arabidopsis thaliana HOM05D005657 ORTHO05D007104 1.6e-102 376.7 321 57.9
Thhalv10008271m.g Eutrema salsugineum HOM05D005657 ORTHO05D007104 3.6e-102 375.6 311 58.8
ECA234G1983 Erigeron canadensis HOM05D005657 ORTHO05D007104 6.2e-102 374.8 307 59.0
MELO3C007126.2 Cucumis melo HOM05D005657 ORTHO05D007104 2.4e-101 372.9 321 57.0
Sc24g0001740 Simmondsia chinensis HOM05D005657 ORTHO05D007104 4.0e-101 372.1 306 59.8
Manes.17G071500 Manihot esculenta HOM05D005657 ORTHO05D007104 5.3e-101 371.7 318 57.9
PSO384G4094 Papaver somniferum HOM05D005657 ORTHO05D007104 9.0e-101 370.9 324 56.8
PSO339G2615 Papaver somniferum HOM05D005657 ORTHO05D007104 2.0e-100 369.8 324 56.5
Sp1g25990 Schrenkiella parvula HOM05D005657 ORTHO05D007104 4.5e-100 368.6 311 58.2
FAN25G2659 Fragaria x ananassa HOM05D005657 ORTHO05D007104 1.7e-99 366.7 268 68.3
A08p24690 Brassica napus HOM05D005657 ORTHO05D007104 2.2e-99 366.3 316 57.6
TPR.G26242 Trifolium pratense HOM05D005657 ORTHO05D007104 2.2e-99 366.3 270 60.7
BcaC01g00157 Brassica carinata HOM05D005657 ORTHO05D007104 3.8e-99 365.5 316 58.2
BcaB03g12197 Brassica carinata HOM05D005657 ORTHO05D007104 6.4e-99 364.8 312 58.0
C03p76410 Brassica napus HOM05D005657 ORTHO05D007104 1.4e-98 363.6 316 57.6
Aa31LG6G5550 Aethionema arabicum HOM05D005657 ORTHO05D007104 3.2e-98 362.5 313 55.9
BolC3t19896H Brassica oleracea HOM05D005657 ORTHO05D007104 4.2e-98 362.1 316 58.5
BraA08t34424Z Brassica rapa HOM05D005657 ORTHO05D007104 7.1e-98 361.3 316 57.0
CARHR029280 Cardamine hirsuta HOM05D005657 ORTHO05D007104 9.3e-98 360.9 314 57.0
Carub.0001s2836 Capsella rubella HOM05D005657 ORTHO05D007104 1.6e-97 360.1 311 57.6
Sed0002032 Sechium edule HOM05D005657 ORTHO05D007104 4.6e-97 358.6 316 55.1
THA.LOC104812673 Tarenaya hassleriana HOM05D005657 ORTHO05D007104 6.0e-97 358.2 324 54.6
Peaxi162Scf00394g00119 Petunia axillaris HOM05D005657 ORTHO05D007104 1.0e-96 357.5 251 69.3
TPR.G26236 Trifolium pratense HOM05D005657 ORTHO05D007104 3.9e-96 355.5 316 52.5
Actinidia07705 Actinidia chinensis HOM05D005657 ORTHO05D007104 3.3e-95 352.4 311 58.8
MBI18_g24473_MAGBIO Magnolia biondii HOM05D005657 ORTHO05D007104 5.6e-95 351.7 311 58.2
EL10Ac8g19662 Beta vulgaris HOM05D005657 ORTHO05D007104 8.1e-94 347.8 316 54.7
Lj2A319G39 Lonicera japonica HOM05D005657 ORTHO05D007104 1.3e-91 340.5 242 67.4
Dinv30768 Davidia involucrata HOM05D005657 ORTHO05D007104 2.2e-91 339.7 236 70.8
Nitab4.5_0000717g0030 Nicotiana tabacum HOM05D005657 ORTHO05D007104 4.9e-91 338.6 263 64.3
Ah.09g232540 Amaranthus hybridus HOM05D005657 ORTHO05D007104 5.5e-90 335.1 316 54.1
FAN11G2536 Fragaria x ananassa HOM05D005657 ORTHO05D007104 6.7e-88 328.2 310 55.2
ATR1098G050 Amborella trichopoda HOM05D005657 ORTHO05D007104 4.3e-87 325.5 330 51.8
AUR62002729 Chenopodium quinoa HOM05D005657 ORTHO05D007104 5.7e-87 325.1 256 61.7
Migut.D01761 Erythranthe guttata HOM05D005657 ORTHO05D007104 3.7e-86 322.4 236 66.1
HPP92_012186 Vanilla planifolia HOM05D005657 ORTHO05D007104 3.7e-86 322.4 320 51.6
SEGI_34988 Sequoiadendron giganteum HOM05D005657 ORTHO05D007104 4.1e-85 318.9 324 49.4
Phvul.006G165700 Phaseolus vulgaris HOM05D005657 ORTHO05D007104 1.5e-84 317.0 317 51.1
Zm00001eb300160 Zea mays HOM05D005657 ORTHO05D007104 4.2e-82 308.9 333 51.7
Hund15862 Selenicereus undatus HOM05D005657 ORTHO05D007104 1.6e-81 307.0 311 52.1
DCAR_027907 Daucus carota HOM05D005657 ORTHO05D007104 3.1e-77 292.7 271 52.0
DCAR_027906 Daucus carota HOM05D005657 ORTHO05D007104 2.5e-74 283.1 271 50.2
DCAR_027905 Daucus carota HOM05D005657 ORTHO05D007104 7.2e-74 281.6 252 54.8
SalBow2G3627 Salvia bowleyana HOM05D005657 ORTHO05D007104 2.7e-73 279.6 316 43.7
Rhsim02G0159300 Rhododendron simsii HOM05D005657 ORTHO05D007104 2.6e-71 273.1 215 61.9
Pp3c19_5890 Physcomitrium patens HOM05D005657 ORTHO05D007104 1.3e-70 270.8 321 46.7
Atru.chr10.1193 Acer truncatum HOM05D005657 ORTHO05D007104 4.1e-69 265.8 208 60.1
Mapoly0156s0023 Marchantia polymorpha HOM05D005657 ORTHO05D007104 2.6e-68 263.1 276 48.6
AUR62030180 Chenopodium quinoa HOM05D005657 ORTHO05D007104 3.2e-66 256.1 173 64.7
SMO364G0117 Selaginella moellendorffii HOM05D005657 ORTHO05D007104 9.4e-66 254.6 301 47.5
CDE01G0002 Ceratophyllum demersum HOM05D005657 ORTHO05D007104 6.1e-65 251.9 249 51.4
AagrBONN_evm.TU.Sc2ySwM_117.1613 Anthoceros agrestis HOM05D001134 ORTHO05D001035 6.7e-64 248.4 230 53.0
Hma1.2p1_0020F.1_g014100 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 3.1e-61 239.6 177 67.8
BcaB03g12196 Brassica carinata HOM05D005657 ORTHO05D007104 3.2e-58 229.6 156 66.0
Glyma.15G093200 Glycine max HOM05D005657 ORTHO05D007104 2.3e-56 223.4 174 63.2
Os07g0153300 Oryza sativa ssp. japonica HOM05D005657 ORTHO05D007104 8.2e-54 214.9 229 52.0
SGA_v2.0_scaffold333G48980 Striga asiatica HOM05D005657 ORTHO05D007104 1.1e-53 214.5 130 73.1
SalBow2G2566 Salvia bowleyana HOM05D005657 ORTHO05D007104 4.5e-52 209.1 316 37.7
PGSC0003DMG400002455 Solanum tuberosum HOM05D005657 ORTHO05D007104 6.1e-49 198.7 144 63.2
Hma1.2p1_0020F.1_g014120 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 2.7e-44 183.3 143 59.4
AUR62002725 Chenopodium quinoa HOM05D005657 ORTHO05D007104 2.6e-39 166.8 223 41.3
MCO14G385 Micromonas commoda HOM05D005657 ORTHO05D007104 1.7e-38 164.1 234 41.5
unitig_26.g9756 Utricularia gibba HOM05D005657 ORTHO05D007104 1.1e-37 161.4 143 59.4
PRCOL_00005919 Prasinoderma coloniale HOM05D005657 ORTHO05D007104 1.4e-37 161.0 320 34.1
Cre06.g269300 Chlamydomonas reinhardtii HOM05D005657 ORTHO05D007104 7.0e-37 158.7 236 37.7
CBR_g39195 Chara braunii HOM05D005657 ORTHO05D007104 4.5e-36 156.0 470 26.8
TPR.G26247 Trifolium pratense HOM05D005657 ORTHO05D007104 2.1e-33 147.1 97 63.9
SalBow2G0785 Salvia bowleyana HOM05D005657 ORTHO05D007104 1.8e-29 134.0 170 43.5
SGA_v2.0_scaffold37G14914 Striga asiatica HOM05D005657 ORTHO05D007104 3.9e-19 99.8 61 72.1
unitig_26.g9757 Utricularia gibba HOM05D005657 ORTHO05D007104 1.1e-16 91.7 119 46.2
TPR.G7274 Trifolium pratense HOM05D005657 ORTHO05D007104 1.8e-16 90.9 59 61.0
COL.COLO4_31053 Corchorus olitorius HOM05D005657 ORTHO05D007104 3.1e-16 90.1 53 71.7
Glyma.08G293333 Glycine max HOM05D005657 ORTHO05D007104 4.4e-15 86.3 51 72.5
Phvul.007G245866 Phaseolus vulgaris HOM05D005657 ORTHO05D007104 4.7e-09 66.2 47 63.8
CSS0012720 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 1.4e-08 64.7 36 77.8
Duzib160G0546 Durio zibethinus HOM05D005657 ORTHO05D007104 5.8e-07 59.3 37 67.6
SGA_v2.0_scaffold119G32786 Striga asiatica HOM05D005657 ORTHO05D007104 9.9e-07 58.5 31 80.6
MCO01G569 Micromonas commoda HOM05D005657 ORTHO05D007104 1.3e-06 58.2 42 61.9


User provided reference genes

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