Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046577 Camellia sinensis var. sinensis HOM05D007943 ORTHO05D010047 3.0e-93 345.1 170 100.0
CSS0001750 Camellia sinensis var. sinensis HOM05D007943 ORTHO05D010047 5.4e-34 148.3 110 65.5
TAR629G3284 Trochodendron aralioides HOM05D007943 ORTHO05D010047 6.2e-22 108.2 109 51.4
Duzib133G1419 Durio zibethinus HOM05D007943 ORTHO05D010047 1.1e-21 107.5 103 47.6
MD07G1157400 Malus domestica HOM05D007943 ORTHO05D010047 1.5e-20 103.6 103 47.6
RcHm_v2.0_Chr1g0360861 Rosa chinensis HOM05D007943 ORTHO05D010047 4.4e-20 102.1 105 50.5
Oeu042966.1 Olea europaea HOM05D007943 ORTHO05D010047 2.9e-19 99.4 109 47.7
Ciclev10022962m.g Citrus clementina HOM05D007943 ORTHO05D010047 1.4e-18 97.1 113 50.4
FAN10G0207 Fragaria x ananassa HOM05D007943 ORTHO05D010047 1.9e-18 96.7 100 46.0
Manes.05G017800 Manihot esculenta HOM05D007943 ORTHO05D010047 2.4e-18 96.3 104 46.2
QL08p046777 Quercus lobata HOM05D007943 ORTHO05D010047 2.4e-18 96.3 110 45.5
GSVIVG01027420001 Vitis vinifera HOM05D007943 ORTHO05D010047 4.2e-18 95.5 107 47.7
FvH4_7g17420 Fragaria vesca HOM05D007943 ORTHO05D010047 7.1e-18 94.7 100 46.0
FAN06G1823 Fragaria x ananassa HOM05D007943 ORTHO05D010047 7.1e-18 94.7 100 46.0
FAN01G2944 Fragaria x ananassa HOM05D007943 ORTHO05D010047 9.3e-18 94.4 100 46.0
Thecc.01G335100 Theobroma cacao HOM05D007943 ORTHO05D010047 3.5e-17 92.4 90 47.8
FAN03G2903 Fragaria x ananassa HOM05D007943 ORTHO05D010047 4.6e-17 92.0 100 45.0
FAN10G1708 Fragaria x ananassa HOM05D007943 ORTHO05D010047 4.6e-17 92.0 100 45.0
MD01G1087200 Malus domestica HOM05D007943 ORTHO05D010047 7.8e-17 91.3 85 49.4
Gohir.D07G139100 Gossypium hirsutum HOM05D007943 ORTHO05D010047 1.0e-16 90.9 104 42.3
Gorai.001G151200 Gossypium raimondii HOM05D007943 ORTHO05D010047 1.0e-16 90.9 104 42.3
Lj3g0013373 Lotus japonicus HOM05D007943 ORTHO05D010047 1.0e-16 90.9 110 45.5
Prupe.2G195800 Prunus persica HOM05D007943 ORTHO05D010047 1.0e-16 90.9 100 48.0
Gohir.A07G134500 Gossypium hirsutum HOM05D007943 ORTHO05D010047 2.3e-16 89.7 107 40.2
Rhsim01G0178600 Rhododendron simsii HOM05D007943 ORTHO05D010047 2.3e-16 89.7 88 51.1
Glyma.07G051200 Glycine max HOM05D007943 ORTHO05D010047 5.1e-16 88.6 114 43.9
Glyma.16G020300 Glycine max HOM05D007943 ORTHO05D010047 1.5e-15 87.0 112 42.9
Cfa003750 Carpinus fangiana HOM05D007943 ORTHO05D010047 1.9e-15 86.7 114 43.0
Nn3g18838 Nelumbo nucifera HOM05D007943 ORTHO05D010047 1.9e-15 86.7 90 40.0
Potri.002G177700 Populus trichocarpa HOM05D007943 ORTHO05D010047 1.9e-15 86.7 98 42.9
CiPaw.01G081100 Carya illinoinensis HOM05D007943 ORTHO05D010047 2.5e-15 86.3 105 41.9
Hund16743 Selenicereus undatus HOM05D007943 ORTHO05D010047 2.5e-15 86.3 95 44.2
Atru.chr5.749 Acer truncatum HOM05D007943 ORTHO05D010047 3.3e-15 85.9 93 44.1
AUR62004549 Chenopodium quinoa HOM05D007943 ORTHO05D010047 5.6e-15 85.1 115 42.6
Haze_15717 Corylus avellana HOM05D007943 ORTHO05D010047 5.6e-15 85.1 111 43.2
Medtr8g024630 Medicago truncatula HOM05D007943 ORTHO05D010047 9.6e-15 84.3 117 42.7
Potri.014G104100 Populus trichocarpa HOM05D007943 ORTHO05D010047 1.6e-14 83.6 85 45.9
TPR.G4732 Trifolium pratense HOM05D007943 ORTHO05D010047 1.6e-14 83.6 109 38.5
Lalb_Chr10g0100821 Lupinus albus HOM05D007943 ORTHO05D010047 3.6e-14 82.4 86 51.2
Manes.01G241300 Manihot esculenta HOM05D007943 ORTHO05D010047 6.2e-14 81.6 93 38.7
Gorai.007G112000 Gossypium raimondii HOM05D007943 ORTHO05D010047 8.1e-14 81.3 63 55.6
Gohir.D11G104700 Gossypium hirsutum HOM05D007943 ORTHO05D010047 2.4e-13 79.7 63 54.0
Gohir.A11G100000 Gossypium hirsutum HOM05D007943 ORTHO05D010047 3.1e-13 79.3 63 54.0
Psat4g217240 Pisum sativum HOM05D007943 ORTHO05D010047 3.1e-13 79.3 106 46.2
Aqoxy7G00012 Aquilegia oxysepala HOM05D007943 ORTHO05D010047 6.9e-13 78.2 90 42.2
Phvul.006G116500 Phaseolus vulgaris HOM05D007943 ORTHO05D010047 9.0e-13 77.8 113 38.9
COL.COLO4_06217 Corchorus olitorius HOM05D007943 ORTHO05D010047 4.5e-12 75.5 61 54.1
TPR.G25267 Trifolium pratense HOM05D007943 ORTHO05D010047 5.8e-12 75.1 87 49.4
Sabra02G0135900 Salix brachista HOM05D007943 ORTHO05D010047 7.6e-12 74.7 85 43.5
TAR375G0647 Trochodendron aralioides HOM05D007943 ORTHO05D010047 2.9e-11 72.8 67 50.7
arahy.Tifrunner.gnm1.ann1.FJCJ23 Arachis hypogaea HOM05D007943 ORTHO05D010047 3.8e-11 72.4 100 40.0
Glyma.03G260100 Glycine max HOM05D007943 ORTHO05D010047 6.4e-11 71.6 84 42.9
Glyma.19G259000 Glycine max HOM05D007943 ORTHO05D010047 1.4e-10 70.5 85 45.9
Sc23g0001870 Simmondsia chinensis HOM05D007943 ORTHO05D010047 3.2e-10 69.3 86 39.5
BolC8t52866H Brassica oleracea HOM05D007943 ORTHO05D010047 3.5e-09 65.9 80 37.5
A09p68930 Brassica napus HOM05D007943 ORTHO05D010047 7.9e-09 64.7 72 41.7
DCAR_006654 Daucus carota HOM05D007943 ORTHO05D010047 7.9e-09 64.7 65 46.2
AL1G11360 Arabidopsis lyrata HOM05D007943 ORTHO05D010047 1.3e-08 63.9 54 51.9
Phvul.010G118200 Phaseolus vulgaris HOM05D007943 ORTHO05D010047 2.3e-08 63.2 65 47.7
Sed0008180 Sechium edule HOM05D007943 ORTHO05D010047 3.0e-08 62.8 79 35.4
CsaV3_3G007710 Cucumis sativus L. HOM05D007943 ORTHO05D010047 3.9e-08 62.4 100 33.0
Lalb_Chr02g0157681 Lupinus albus HOM05D007943 ORTHO05D010047 5.1e-08 62.0 70 48.6
Carub.0001s0107 Capsella rubella HOM05D007943 ORTHO05D010047 6.7e-08 61.6 50 50.0
MELO3C005988.2 Cucumis melo HOM05D007943 ORTHO05D010047 1.1e-07 60.8 89 39.3
CsaV3_3G007690 Cucumis sativus L. HOM05D007943 ORTHO05D010047 1.1e-07 60.8 87 40.2
HPP92_015077 Vanilla planifolia HOM05D000968 ORTHO05D001687 4.3e-07 58.9 55 50.9
Solyc10g009260.1 Solanum lycopersicum HOM05D007943 ORTHO05D010047 1.3e-06 57.4 43 55.8
ClCG05G000500 Citrullus lanatus HOM05D007943 ORTHO05D010047 1.6e-06 57.0 67 38.8
Os03g0126900 Oryza sativa ssp. japonica HOM05D007943 ORTHO05D010047 2.8e-06 56.2 65 38.5
Sed0006019 Sechium edule HOM05D007943 ORTHO05D010047 4.8e-06 55.5 78 37.2


User provided reference genes

Program Settings