Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046539 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 1.3e-84 316.2 153 100.0
CSS0020713 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 1.8e-44 183.0 144 70.8
vmacro20039 Vaccinium macrocarpon HOM05D006715 ORTHO05D008345 2.2e-42 176.0 150 68.7
Rhsim05G0181200 Rhododendron simsii HOM05D006715 ORTHO05D008345 7.0e-41 171.0 151 66.9
Lj7A376T34 Lonicera japonica HOM05D006715 ORTHO05D008345 1.7e-39 166.4 147 64.6
Dinv41067 Davidia involucrata HOM05D006715 ORTHO05D008345 1.1e-38 163.7 143 63.6
Actinidia17784 Actinidia chinensis HOM05D006715 ORTHO05D008345 1.7e-34 149.8 156 60.3
TWI34G0194 Tripterygium wilfordii HOM05D006715 ORTHO05D008345 1.9e-30 136.3 146 54.1
GSVIVG01034549001 Vitis vinifera HOM05D006715 ORTHO05D008345 1.2e-29 133.7 140 55.7
Nn5g28769 Nelumbo nucifera HOM05D006715 ORTHO05D008345 3.6e-29 132.1 148 53.4
Gorai.010G134600 Gossypium raimondii HOM05D006715 ORTHO05D008345 6.2e-29 131.3 148 55.4
Lsat_1_v5_gn_9_41180 Lactuca sativa HOM05D006715 ORTHO05D008345 1.8e-28 129.8 146 54.1
DCAR_010095 Daucus carota HOM05D006715 ORTHO05D008345 6.8e-28 127.9 123 57.7
Gohir.D06G116900 Gossypium hirsutum HOM05D006715 ORTHO05D008345 1.2e-27 127.1 148 54.1
TAR381G1273 Trochodendron aralioides HOM05D006715 ORTHO05D008345 2.0e-27 126.3 148 54.7
CiPaw.16G011000 Carya illinoinensis HOM05D006715 ORTHO05D008345 3.4e-27 125.6 147 49.7
COL.COLO4_29857 Corchorus olitorius HOM05D006715 ORTHO05D008345 3.4e-27 125.6 149 53.0
ECA232G1953 Erigeron canadensis HOM05D006715 ORTHO05D008345 5.8e-27 124.8 144 52.1
Gohir.A06G112504 Gossypium hirsutum HOM05D006715 ORTHO05D008345 5.8e-27 124.8 148 53.4
Manes.02G180601 Manihot esculenta HOM05D006715 ORTHO05D008345 7.5e-27 124.4 155 51.6
RcHm_v2.0_Chr5g0050861 Rosa chinensis HOM05D006715 ORTHO05D008345 7.5e-27 124.4 144 54.9
RcHm_v2.0_Chr6g0275051 Rosa chinensis HOM05D006715 ORTHO05D008345 7.5e-27 124.4 146 54.8
Sc02g0003950 Simmondsia chinensis HOM05D006715 ORTHO05D008345 9.8e-27 124.0 141 51.8
Migut.N03207 Erythranthe guttata HOM05D006715 ORTHO05D008345 1.7e-26 123.2 121 57.0
Nitab4.5_0001187g0100 Nicotiana tabacum HOM05D006715 ORTHO05D008345 2.2e-26 122.9 144 51.4
Phvul.004G094200 Phaseolus vulgaris HOM05D006715 ORTHO05D008345 3.7e-26 122.1 128 55.5
Ciclev10000601m.g Citrus clementina HOM05D006715 ORTHO05D008345 6.4e-26 121.3 127 55.9
Eucgr.F02698 Eucalyptus grandis HOM05D006715 ORTHO05D008345 1.1e-25 120.6 128 56.2
Cfa018312 Carpinus fangiana HOM05D006715 ORTHO05D008345 1.4e-25 120.2 147 51.0
Hund26691 Selenicereus undatus HOM05D006715 ORTHO05D008345 1.4e-25 120.2 144 47.9
Aqoxy5G00857 Aquilegia oxysepala HOM05D006715 ORTHO05D008345 1.9e-25 119.8 143 51.0
Lalb_Chr01g0009551 Lupinus albus HOM05D006715 ORTHO05D008345 1.9e-25 119.8 129 53.5
Atru.chr13.2084 Acer truncatum HOM05D006715 ORTHO05D008345 2.4e-25 119.4 128 50.8
PGR042G1662 Punica granatum HOM05D006715 ORTHO05D008345 2.4e-25 119.4 149 51.0
Oeu031098.1 Olea europaea HOM05D006715 ORTHO05D008345 3.2e-25 119.0 144 52.8
VMungo0464G1764 Vigna mungo HOM05D006715 ORTHO05D008345 3.2e-25 119.0 132 53.8
Duzib093G1010 Durio zibethinus HOM05D006715 ORTHO05D008345 4.1e-25 118.6 149 51.7
SalBow6G6609 Salvia bowleyana HOM05D006715 ORTHO05D008345 4.1e-25 118.6 128 52.3
HanXRQChr11g0320291 Helianthus annuus HOM05D006715 ORTHO05D008345 5.4e-25 118.2 145 51.0
Lj2g0009741 Lotus japonicus HOM05D006715 ORTHO05D008345 4.6e-24 115.2 129 54.3
SGA_v2.0_scaffold25G11186 Striga asiatica HOM05D006715 ORTHO05D008345 4.6e-24 115.2 149 50.3
CANSAT25G3857 Cannabis sativa HOM05D006715 ORTHO05D008345 6.0e-24 114.8 158 48.7
FvH4_2g13430 Fragaria vesca HOM05D006715 ORTHO05D008345 1.0e-23 114.0 128 53.1
FAN24G1213 Fragaria x ananassa HOM05D006715 ORTHO05D008345 1.0e-23 114.0 128 53.1
MSTRG.24217 Avicennia marina HOM05D006715 ORTHO05D008345 1.3e-23 113.6 160 43.8
CAN.G1215.10 Capsicum annuum HOM05D006715 ORTHO05D008345 1.3e-23 113.6 153 45.1
ClCG08G002210 Citrullus lanatus HOM05D006715 ORTHO05D008345 1.3e-23 113.6 128 49.2
CsaV3_6G002600 Cucumis sativus L. HOM05D006715 ORTHO05D008345 1.3e-23 113.6 128 49.2
FAN27G2814 Fragaria x ananassa HOM05D006715 ORTHO05D008345 1.7e-23 113.2 132 51.5
Peaxi162Scf00599g00121 Petunia axillaris HOM05D006715 ORTHO05D008345 1.7e-23 113.2 171 44.4
unitig_21.g20147 Utricularia gibba HOM05D006715 ORTHO05D008345 3.9e-23 112.1 142 45.8
MELO3C025024.2 Cucumis melo HOM05D006715 ORTHO05D008345 6.6e-23 111.3 130 48.5
Glyma.16G166267 Glycine max HOM05D006715 ORTHO05D008345 1.1e-22 110.5 129 51.9
Medtr2g045070 Medicago truncatula HOM05D006715 ORTHO05D008345 1.1e-22 110.5 147 46.9
BcaB01g02294 Brassica carinata HOM05D006715 ORTHO05D008345 2.5e-22 109.4 122 50.0
CDE12G0089 Ceratophyllum demersum HOM05D006715 ORTHO05D008345 2.5e-22 109.4 142 46.5
THA.LOC104804670 Tarenaya hassleriana HOM05D006715 ORTHO05D008345 2.5e-22 109.4 149 43.6
Thecc.08G154500 Theobroma cacao HOM05D006715 ORTHO05D008345 2.5e-22 109.4 128 53.9
Potri.005G193500 Populus trichocarpa HOM05D006715 ORTHO05D008345 3.3e-22 109.0 127 52.0
Sed0009104 Sechium edule HOM05D006715 ORTHO05D008345 3.3e-22 109.0 132 47.7
Cc10_g14930 Coffea canephora HOM05D006715 ORTHO05D008345 5.6e-22 108.2 128 50.0
A09p00880 Brassica napus HOM05D006715 ORTHO05D008345 7.3e-22 107.8 128 48.4
BraA09t35760Z Brassica rapa HOM05D006715 ORTHO05D008345 7.3e-22 107.8 128 48.4
MD05G1027900 Malus domestica HOM05D006715 ORTHO05D008345 9.5e-22 107.5 153 45.8
Psat1g102000 Pisum sativum HOM05D006715 ORTHO05D008345 2.1e-21 106.3 149 47.7
BcaC04g24108 Brassica carinata HOM05D006715 ORTHO05D008345 2.8e-21 105.9 124 48.4
Sopen04g027550 Solanum pennellii HOM05D006715 ORTHO05D008345 2.8e-21 105.9 152 45.4
C09p00980 Brassica napus HOM05D006715 ORTHO05D008345 3.6e-21 105.5 124 48.4
arahy.Tifrunner.gnm1.ann1.6MC3QX Arachis hypogaea HOM05D006715 ORTHO05D008345 4.7e-21 105.1 144 46.5
BolC9t53031H Brassica oleracea HOM05D006715 ORTHO05D008345 6.2e-21 104.8 124 47.6
Cpa.g.sc1027.1 Carica papaya HOM05D006715 ORTHO05D008345 6.2e-21 104.8 151 47.7
TPR.G23114 Trifolium pratense HOM05D006715 ORTHO05D008345 8.1e-21 104.4 124 53.2
AL1G51600 Arabidopsis lyrata HOM05D006715 ORTHO05D008345 3.1e-20 102.4 119 47.9
Thhalv10003905m.g Eutrema salsugineum HOM05D006715 ORTHO05D008345 5.2e-20 101.7 124 46.0
ATR0820G173 Amborella trichopoda HOM05D006715 ORTHO05D008345 1.2e-19 100.5 136 42.6
CARHR035370 Cardamine hirsuta HOM05D006715 ORTHO05D008345 1.5e-19 100.1 119 47.9
AT1G43245 Arabidopsis thaliana HOM05D006715 ORTHO05D008345 2.0e-19 99.8 119 46.2
MBI17_g41095_MAGBIO Magnolia biondii HOM05D006715 ORTHO05D008345 2.6e-19 99.4 164 43.3
Sp1g32410 Schrenkiella parvula HOM05D006715 ORTHO05D008345 3.4e-19 99.0 123 45.5
Zm00001eb083170 Zea mays HOM05D006715 ORTHO05D008345 3.4e-19 99.0 124 43.5
PSO675G4790 Papaver somniferum HOM05D006715 ORTHO05D008345 9.8e-19 97.4 145 44.8
arahy.Tifrunner.gnm1.ann1.SG7PGU Arachis hypogaea HOM05D006715 ORTHO05D008345 1.1e-17 94.0 163 41.1
EL10Ac1g01568 Beta vulgaris HOM05D006715 ORTHO05D008345 1.1e-17 94.0 121 46.3
Prupe.8G033600 Prunus persica HOM05D006715 ORTHO05D008345 1.1e-17 94.0 110 50.9
HPP92_009296 Vanilla planifolia HOM05D006715 ORTHO05D008345 5.4e-17 91.7 128 45.3
Os04g0423600 Oryza sativa ssp. japonica HOM05D006715 ORTHO05D008345 9.2e-17 90.9 146 41.1
SEGI_11470 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 2.7e-16 89.4 153 37.9
Aa31LG6G9940 Aethionema arabicum HOM05D006715 ORTHO05D008345 4.6e-16 88.6 158 41.8
QL09p013340 Quercus lobata HOM05D006715 ORTHO05D008345 4.6e-16 88.6 116 45.7
SHI09071 Sapria himalayana HOM05D006715 ORTHO05D008345 7.3e-14 81.3 219 31.5
Carub.0001s3454 Capsella rubella HOM05D006715 ORTHO05D008345 1.2e-11 73.9 50 72.0
Medtr3g062560 Medicago truncatula HOM05D006715 ORTHO05D008345 9.9e-11 70.9 73 57.5
Glyma.16G166500 Glycine max HOM05D006715 ORTHO05D008345 1.3e-10 70.5 71 53.5
SEGI_20433 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 1.9e-06 56.6 124 35.5
Lj2g0026984 Lotus japonicus HOM05D006715 ORTHO05D008345 3.3e-06 55.8 30 83.3


User provided reference genes

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