Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046506 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 2.5e-225 785.0 375 100.0
CSS0033600 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 3.1e-199 698.4 348 96.8
Rhsim11G0146300 Rhododendron simsii HOM05D006483 ORTHO05D007837 4.8e-176 621.3 359 82.5
vmacro01915 Vaccinium macrocarpon HOM05D006483 ORTHO05D007837 6.3e-176 620.9 363 81.5
CiPaw.06G161800 Carya illinoinensis HOM05D006483 ORTHO05D007837 1.1e-172 610.1 364 80.8
QL11p027690 Quercus lobata HOM05D006483 ORTHO05D007837 1.9e-172 609.4 363 80.4
Dinv09500 Davidia involucrata HOM05D006483 ORTHO05D007837 7.2e-172 607.4 334 85.0
GSVIVG01036968001 Vitis vinifera HOM05D006483 ORTHO05D007837 6.1e-171 604.4 355 81.1
CiPaw.05G024900 Carya illinoinensis HOM05D006483 ORTHO05D007837 7.9e-171 604.0 332 85.2
Atru.chr5.2145 Acer truncatum HOM05D006483 ORTHO05D007837 1.4e-170 603.2 369 78.6
Duzib132G0719 Durio zibethinus HOM05D006483 ORTHO05D007837 3.0e-170 602.1 356 80.3
Thecc.02G034600 Theobroma cacao HOM05D006483 ORTHO05D007837 3.0e-170 602.1 331 84.9
Duzib248G0339 Durio zibethinus HOM05D006483 ORTHO05D007837 5.1e-170 601.3 332 84.3
Glyma.15G061600 Glycine max HOM05D006483 ORTHO05D007837 5.1e-170 601.3 366 78.1
Phvul.006G198100 Phaseolus vulgaris HOM05D006483 ORTHO05D007837 5.1e-170 601.3 372 77.7
VMungo0540G0518 Vigna mungo HOM05D006483 ORTHO05D007837 6.7e-170 600.9 372 77.7
Cfa004758 Carpinus fangiana HOM05D006483 ORTHO05D007837 2.0e-169 599.4 353 80.5
Lj1g0015418 Lotus japonicus HOM05D006483 ORTHO05D007837 1.7e-168 596.3 370 77.6
Lalb_Chr15g0090221 Lupinus albus HOM05D006483 ORTHO05D007837 2.2e-168 595.9 334 82.3
arahy.Tifrunner.gnm1.ann1.SKNB9F Arachis hypogaea HOM05D006483 ORTHO05D007837 4.8e-168 594.7 342 81.0
Prupe.8G157100 Prunus persica HOM05D006483 ORTHO05D007837 6.3e-168 594.3 353 79.6
Ciclev10030436m.g Citrus clementina HOM05D006483 ORTHO05D007837 1.4e-167 593.2 374 75.9
Sabra16G0180000 Salix brachista HOM05D006483 ORTHO05D007837 1.8e-167 592.8 331 83.7
Lsat_1_v5_gn_5_110541 Lactuca sativa HOM05D006483 ORTHO05D007837 4.1e-167 591.7 335 81.5
Lj5C223T22 Lonicera japonica HOM05D006483 ORTHO05D007837 4.1e-167 591.7 361 78.4
Cc02_g20380 Coffea canephora HOM05D006483 ORTHO05D007837 7.0e-167 590.9 366 78.7
PGR142G2962 Punica granatum HOM05D006483 ORTHO05D007837 1.2e-166 590.1 381 74.3
Gohir.D12G041300 Gossypium hirsutum HOM05D006483 ORTHO05D007837 1.5e-166 589.7 370 76.2
Nn6g34537 Nelumbo nucifera HOM05D006483 ORTHO05D007837 2.0e-166 589.3 335 80.9
TWI59G1265 Tripterygium wilfordii HOM05D006483 ORTHO05D007837 2.0e-166 589.3 332 82.5
Cpa.g.sc20.69 Carica papaya HOM05D006483 ORTHO05D007837 3.5e-166 588.6 354 77.7
CsaV3_4G014600 Cucumis sativus L. HOM05D006483 ORTHO05D007837 3.5e-166 588.6 356 76.7
Sed0015964 Sechium edule HOM05D006483 ORTHO05D007837 3.5e-166 588.6 331 80.4
Gohir.A12G031000 Gossypium hirsutum HOM05D006483 ORTHO05D007837 4.5e-166 588.2 370 75.7
Gorai.008G043200 Gossypium raimondii HOM05D006483 ORTHO05D007837 5.9e-166 587.8 369 76.4
Medtr2g010480 Medicago truncatula HOM05D006483 ORTHO05D007837 5.9e-166 587.8 365 77.0
Solyc11g044310.2 Solanum lycopersicum HOM05D006483 ORTHO05D007837 5.9e-166 587.8 363 76.6
MD10G1115000 Malus domestica HOM05D006483 ORTHO05D007837 1.3e-165 586.6 332 82.2
FAN20G1555 Fragaria x ananassa HOM05D006483 ORTHO05D007837 1.7e-165 586.3 369 75.6
Sopen11g019810 Solanum pennellii HOM05D006483 ORTHO05D007837 1.7e-165 586.3 363 76.3
ClCG10G009710 Citrullus lanatus HOM05D006483 ORTHO05D007837 2.9e-165 585.5 334 80.2
Eucgr.I02515 Eucalyptus grandis HOM05D006483 ORTHO05D007837 3.8e-165 585.1 352 78.1
TAR376G0523 Trochodendron aralioides HOM05D006483 ORTHO05D007837 3.8e-165 585.1 356 78.1
RcHm_v2.0_Chr6g0246361 Rosa chinensis HOM05D006483 ORTHO05D007837 5.0e-165 584.7 360 76.9
Ca_00195_v3 Cicer arietinum L. HOM05D006483 ORTHO05D007837 6.5e-165 584.3 393 72.8
COL.COLO4_17833 Corchorus olitorius HOM05D006483 ORTHO05D007837 6.5e-165 584.3 354 78.2
FAN24G1160 Fragaria x ananassa HOM05D006483 ORTHO05D007837 6.5e-165 584.3 369 75.6
Manes.07G049300 Manihot esculenta HOM05D006483 ORTHO05D007837 1.4e-164 583.2 349 78.5
Psat1g212200 Pisum sativum HOM05D006483 ORTHO05D007837 1.4e-164 583.2 334 79.9
Potri.001G287700 Populus trichocarpa HOM05D006483 ORTHO05D007837 1.9e-164 582.8 331 82.2
CANSAT25G2975 Cannabis sativa HOM05D006483 ORTHO05D007837 1.6e-163 579.7 377 74.5
FvH4_2g02550 Fragaria vesca HOM05D006483 ORTHO05D007837 2.1e-163 579.3 369 75.1
Sc14g0002760 Simmondsia chinensis HOM05D006483 ORTHO05D007837 4.7e-163 578.2 348 77.3
FAN15G2441 Fragaria x ananassa HOM05D006483 ORTHO05D007837 1.4e-162 576.6 331 81.0
PSO541G5548 Papaver somniferum HOM05D006483 ORTHO05D007837 1.8e-162 576.2 327 81.7
HanXRQChr10g0297661 Helianthus annuus HOM05D006483 ORTHO05D007837 2.3e-162 575.9 371 75.2
CAN.G475.27 Capsicum annuum HOM05D006483 ORTHO05D007837 5.2e-162 574.7 342 78.7
Peaxi162Scf00152g00613 Petunia axillaris HOM05D006483 ORTHO05D007837 2.0e-161 572.8 359 75.8
Aqoxy6G02925 Aquilegia oxysepala HOM05D006483 ORTHO05D007837 7.4e-161 570.9 382 73.3
ECA234G3552 Erigeron canadensis HOM05D006483 ORTHO05D007837 9.7e-161 570.5 321 82.2
Aa31LG8G12670 Aethionema arabicum HOM05D006483 ORTHO05D007837 3.7e-160 568.5 333 79.0
PSO675G7999 Papaver somniferum HOM05D006483 ORTHO05D007837 3.7e-160 568.5 362 75.1
Carub.0003s2843 Capsella rubella HOM05D006483 ORTHO05D007837 6.3e-160 567.8 331 79.2
FAN27G0654 Fragaria x ananassa HOM05D006483 ORTHO05D007837 8.2e-160 567.4 392 70.9
Thhalv10022723m.g Eutrema salsugineum HOM05D006483 ORTHO05D007837 1.1e-159 567.0 330 78.8
THA.LOC104819515 Tarenaya hassleriana HOM05D006483 ORTHO05D007837 3.1e-159 565.5 332 79.5
DCAR_029840 Daucus carota HOM05D006483 ORTHO05D007837 9.1e-159 563.9 336 78.6
AL3G45940 Arabidopsis lyrata HOM05D006483 ORTHO05D007837 4.5e-158 561.6 331 78.9
Sp3g27660 Schrenkiella parvula HOM05D006483 ORTHO05D007837 7.7e-158 560.8 330 78.2
A03p45170 Brassica napus HOM05D006483 ORTHO05D007837 1.7e-157 559.7 356 74.7
BolC3t17891H Brassica oleracea HOM05D006483 ORTHO05D007837 2.9e-157 558.9 319 79.9
BraA03t13652Z Brassica rapa HOM05D006483 ORTHO05D007837 2.9e-157 558.9 319 80.3
SalBow6G1047 Salvia bowleyana HOM05D006483 ORTHO05D007837 3.8e-157 558.5 356 74.7
EL10Ac9g22152 Beta vulgaris HOM05D006483 ORTHO05D007837 5.0e-157 558.1 329 79.0
BcaC01g03099 Brassica carinata HOM05D006483 ORTHO05D007837 5.0e-157 558.1 319 79.9
CARHR105280 Cardamine hirsuta HOM05D006483 ORTHO05D007837 5.0e-157 558.1 319 80.9
BcaB08g34553 Brassica carinata HOM05D006483 ORTHO05D007837 2.5e-156 555.8 354 73.4
ATR0739G015 Amborella trichopoda HOM05D006483 ORTHO05D007837 3.6e-155 552.0 319 79.3
AT2G14260 Arabidopsis thaliana HOM05D006483 ORTHO05D007837 3.6e-155 552.0 320 80.0
Migut.B00501 Erythranthe guttata HOM05D006483 ORTHO05D007837 1.0e-154 550.4 326 78.2
unitig_21.g20708 Utricularia gibba HOM05D006483 ORTHO05D007837 5.7e-153 544.7 330 75.2
C03p56040 Brassica napus HOM05D006483 ORTHO05D007837 1.3e-152 543.5 348 73.3
SGA_v2.0_scaffold342G49421 Striga asiatica HOM05D006483 ORTHO05D007837 3.1e-151 538.9 369 70.5
TAR628G0755 Trochodendron aralioides HOM05D006483 ORTHO05D007837 5.0e-149 531.6 301 80.7
CDE02G1970 Ceratophyllum demersum HOM05D006483 ORTHO05D007837 1.5e-148 530.0 335 74.9
arahy.Tifrunner.gnm1.ann1.AKE21I Arachis hypogaea HOM05D006483 ORTHO05D007837 2.5e-148 529.3 342 73.7
MELO3C018038.2 Cucumis melo HOM05D006483 ORTHO05D007837 2.7e-147 525.8 368 69.8
HPP92_006303 Vanilla planifolia HOM05D006483 ORTHO05D007837 1.5e-145 520.0 360 69.7
MSTRG.16655 Avicennia marina HOM05D006483 ORTHO05D007837 2.7e-142 509.2 297 77.8
AagrBONN_evm.TU.Sc2ySwM_344.4362 Anthoceros agrestis HOM05D006483 ORTHO05D007837 1.0e-138 497.3 345 64.6
SMO145G0068 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.2e-137 493.8 316 70.6
Mapoly0001s0344 Marchantia polymorpha HOM05D006483 ORTHO05D007837 1.1e-135 487.3 314 70.4
AUR62027055 Chenopodium quinoa HOM05D006483 ORTHO05D007837 3.5e-134 482.3 330 70.3
Zm00001eb292750 Zea mays HOM05D006483 ORTHO05D007837 3.9e-133 478.8 288 76.0
Pp3c4_27270 Physcomitrium patens HOM05D006483 ORTHO05D007837 8.6e-133 477.6 320 67.2
Haze_10356 Corylus avellana HOM05D006483 ORTHO05D007837 9.5e-132 474.2 601 46.9
CBR_g8564 Chara braunii HOM05D006483 ORTHO05D007837 8.9e-122 441.0 320 63.4
Os05g0513900 Oryza sativa ssp. japonica HOM05D006483 ORTHO05D007837 5.4e-111 405.2 252 75.4
Ah.01g024350 Amaranthus hybridus HOM05D006483 ORTHO05D007837 8.1e-107 391.3 274 69.3
Nitab4.5_0007517g0010 Nicotiana tabacum HOM05D006483 ORTHO05D007837 6.9e-98 361.7 237 74.7
Actinidia00335 Actinidia chinensis HOM05D006483 ORTHO05D007837 3.8e-96 355.9 215 80.5
AUR62030898 Chenopodium quinoa HOM05D006483 ORTHO05D007837 2.4e-90 336.7 282 60.6
Mapoly0142s0028 Marchantia polymorpha HOM05D006483 ORTHO05D007837 5.8e-89 332.0 355 45.6
AagrBONN_evm.TU.Sc2ySwM_344.1401 Anthoceros agrestis HOM05D006483 ORTHO05D007837 1.8e-82 310.5 356 43.3
SMO364G0301 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 7.9e-78 295.0 317 45.1
SMO353G0285 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 3.0e-77 293.1 318 45.6
MBI16_g27214_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 6.7e-77 292.0 166 83.7
MBI16_g41225_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 4.6e-62 242.7 192 63.0
Zm00001eb142680 Zea mays HOM05D006483 ORTHO05D007837 2.5e-55 220.3 229 49.3
SEGI_12853 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 2.4e-50 203.8 127 72.4
PRCOL_00002897 Prasinoderma coloniale HOM05D006483 ORTHO05D007837 1.5e-49 201.1 335 37.3
Cre08.g375600 Chlamydomonas reinhardtii HOM05D006483 ORTHO05D007837 2.8e-43 180.3 200 44.0
EL10Ac8g19599 Beta vulgaris HOM05D006483 ORTHO05D007837 1.2e-41 174.9 138 65.9
MD05G1112500 Malus domestica HOM05D006483 ORTHO05D007837 2.7e-38 163.7 208 46.2
Oeu007495.1 Olea europaea HOM05D006483 ORTHO05D007837 7.7e-33 145.6 83 77.1
MD05G1112400 Malus domestica HOM05D006483 ORTHO05D007837 9.5e-23 112.1 69 71.0
SEGI_05070 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 1.1e-15 88.6 79 49.4
TPR.G27616 Trifolium pratense HOM05D006483 ORTHO05D007837 1.4e-10 71.6 38 73.7
SEGI_04316 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 2.7e-09 67.4 34 76.5
Zm00001eb049690 Zea mays HOM05D003600 ORTHO05D004129 3.3e-07 60.5 54 51.9
Hma1.2p1_0200F.1_g086050 Hydrangea macrophylla HOM05D006483 ORTHO05D007837 9.5e-07 58.9 68 47.1


User provided reference genes

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