Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046499 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 8.9e-44 180.3 118 100.0
CSS0018736 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.3e-18 96.7 47 95.7
arahy.Tifrunner.gnm1.ann1.18R96V Arachis hypogaea HOM05D006757 ORTHO05D004651 1.8e-15 86.3 47 85.1
arahy.Tifrunner.gnm1.ann1.CLVE3A Arachis hypogaea HOM05D006757 ORTHO05D004651 1.8e-15 86.3 47 85.1
Actinidia12418 Actinidia chinensis HOM05D006757 ORTHO05D004651 3.0e-15 85.5 46 84.8
COL.COLO4_27539 Corchorus olitorius HOM05D006757 ORTHO05D004651 3.9e-15 85.1 46 84.8
FvH4_4g36030 Fragaria vesca HOM05D006757 ORTHO05D004651 5.1e-15 84.7 46 84.8
FAN07G0462 Fragaria x ananassa HOM05D006757 ORTHO05D004651 5.1e-15 84.7 46 84.8
FAN12G3615 Fragaria x ananassa HOM05D006757 ORTHO05D004651 5.1e-15 84.7 46 84.8
FAN17G2536 Fragaria x ananassa HOM05D006757 ORTHO05D004651 5.1e-15 84.7 46 84.8
FAN22G1875 Fragaria x ananassa HOM05D006757 ORTHO05D004651 5.1e-15 84.7 46 84.8
PGR142G0977 Punica granatum HOM05D006757 ORTHO05D004651 5.1e-15 84.7 47 80.9
Dinv02708 Davidia involucrata HOM05D006757 ORTHO05D004651 1.1e-14 83.6 46 82.6
Duzib248G0842 Durio zibethinus HOM05D006757 ORTHO05D004651 1.1e-14 83.6 46 82.6
Ca_11197_v3 Cicer arietinum L. HOM05D006757 ORTHO05D004651 1.5e-14 83.2 47 80.9
Lalb_Chr21g0306871 Lupinus albus HOM05D006757 ORTHO05D004651 1.5e-14 83.2 47 83.0
Aqoxy3G04184 Aquilegia oxysepala HOM05D006757 ORTHO05D004651 1.9e-14 82.8 47 78.7
CiPaw.05G164400 Carya illinoinensis HOM05D006757 ORTHO05D004651 1.9e-14 82.8 46 80.4
Migut.E00572 Erythranthe guttata HOM05D006757 ORTHO05D004651 2.5e-14 82.4 47 83.0
Eucgr.G02041 Eucalyptus grandis HOM05D006757 ORTHO05D004651 2.5e-14 82.4 47 83.0
Thhalv10018185m.g Eutrema salsugineum HOM05D006757 ORTHO05D004651 2.5e-14 82.4 47 78.7
MD16G1009700 Malus domestica HOM05D006757 ORTHO05D004651 2.5e-14 82.4 46 82.6
Sp5g30140 Schrenkiella parvula HOM05D006757 ORTHO05D004651 2.5e-14 82.4 47 78.7
Prupe.1G340900 Prunus persica HOM05D006757 ORTHO05D004651 4.3e-14 81.6 46 80.4
Thecc.02G299300 Theobroma cacao HOM05D006757 ORTHO05D004651 4.3e-14 81.6 45 82.2
AL2G34890 Arabidopsis lyrata HOM05D006757 ORTHO05D004651 5.6e-14 81.3 47 76.6
AT1G75010 Arabidopsis thaliana HOM05D006757 ORTHO05D004651 5.6e-14 81.3 47 76.6
BcaC08g46956 Brassica carinata HOM05D006757 ORTHO05D004651 5.6e-14 81.3 47 76.6
Carub.0002s2179 Capsella rubella HOM05D006757 ORTHO05D004651 5.6e-14 81.3 47 76.6
CARHR068320 Cardamine hirsuta HOM05D006757 ORTHO05D004651 5.6e-14 81.3 47 76.6
Glyma.10G280500 Glycine max HOM05D006757 ORTHO05D004651 5.6e-14 81.3 47 80.9
HanXRQChr12g0365871 Helianthus annuus HOM05D006757 ORTHO05D004651 5.6e-14 81.3 47 76.6
Phvul.007G020500 Phaseolus vulgaris HOM05D006757 ORTHO05D004651 5.6e-14 81.3 47 80.9
Sabra10G0071900 Salix brachista HOM05D006757 ORTHO05D004651 5.6e-14 81.3 83 84.3
TWI53G1444 Tripterygium wilfordii HOM05D006757 ORTHO05D004651 5.6e-14 81.3 46 78.3
RcHm_v2.0_Chr4g0445651 Rosa chinensis HOM05D006757 ORTHO05D004651 7.4e-14 80.9 46 80.4
VMungo0720G1053 Vigna mungo HOM05D006757 ORTHO05D004651 7.4e-14 80.9 47 80.9
GSVIVG01010290001 Vitis vinifera HOM05D006757 ORTHO05D004651 7.4e-14 80.9 46 78.3
ECA233G5323 Erigeron canadensis HOM05D006757 ORTHO05D004651 9.6e-14 80.5 46 78.3
Gohir.A01G144000 Gossypium hirsutum HOM05D006757 ORTHO05D004651 9.6e-14 80.5 46 78.3
Gorai.002G169200 Gossypium raimondii HOM05D006757 ORTHO05D004651 9.6e-14 80.5 46 78.3
Lj6C727G2 Lonicera japonica HOM05D006757 ORTHO05D004651 9.6e-14 80.5 47 78.7
BcaC08g46933 Brassica carinata HOM05D006757 ORTHO05D004651 1.3e-13 80.1 47 76.6
A07p40640 Brassica napus HOM05D006757 ORTHO05D004651 1.3e-13 80.1 47 76.6
C06p49010 Brassica napus HOM05D006757 ORTHO05D004651 1.3e-13 80.1 47 76.6
BolC6t39938H Brassica oleracea HOM05D006757 ORTHO05D004651 1.3e-13 80.1 47 76.6
BraA07t31608Z Brassica rapa HOM05D006757 ORTHO05D004651 1.3e-13 80.1 47 76.6
Nn4g24781 Nelumbo nucifera HOM05D006757 ORTHO05D004651 1.3e-13 80.1 47 74.5
TAR622G0072 Trochodendron aralioides HOM05D006757 ORTHO05D004651 1.3e-13 80.1 46 76.1
Lj5g0011768 Lotus japonicus HOM05D006757 ORTHO05D004651 1.6e-13 79.7 47 78.7
Haze_10724 Corylus avellana HOM05D006757 ORTHO05D004651 2.1e-13 79.3 45 80.0
Medtr1g112280 Medicago truncatula HOM05D006757 ORTHO05D004651 2.1e-13 79.3 47 76.6
Gohir.D01G136700 Gossypium hirsutum HOM05D006757 ORTHO05D004651 2.8e-13 79.0 46 76.1
Manes.17G092000 Manihot esculenta HOM05D006757 ORTHO05D004651 2.8e-13 79.0 46 76.1
SalBow2G2705 Salvia bowleyana HOM05D006757 ORTHO05D004651 2.8e-13 79.0 47 78.7
Hma1.2p1_0933F.1_g238400 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 3.7e-13 78.6 45 80.0
Hma1.2p1_0933F.1_g238410 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 3.7e-13 78.6 45 80.0
QL03p041041 Quercus lobata HOM05D006757 ORTHO05D004651 3.7e-13 78.6 45 77.8
CDE04G1248 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 4.8e-13 78.2 46 80.4
Potri.010G099300 Populus trichocarpa HOM05D006757 ORTHO05D004651 4.8e-13 78.2 46 76.1
THA.LOC104809054 Tarenaya hassleriana HOM05D006757 ORTHO05D004651 4.8e-13 78.2 47 74.5
ClCG01G006950 Citrullus lanatus HOM05D006757 ORTHO05D004651 6.2e-13 77.8 44 77.3
Sed0027541 Sechium edule HOM05D006757 ORTHO05D004651 6.2e-13 77.8 46 73.9
vmacro10765 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 6.2e-13 77.8 44 79.5
Aa31LG4G5230 Aethionema arabicum HOM05D006757 ORTHO05D004651 8.1e-13 77.4 46 73.9
ATR0807G004 Amborella trichopoda HOM05D006757 ORTHO05D004651 8.1e-13 77.4 46 76.1
CsaV3_5G017370 Cucumis sativus L. HOM05D006757 ORTHO05D004651 1.1e-12 77.0 46 73.9
Nitab4.5_0004543g0020 Nicotiana tabacum HOM05D006757 ORTHO05D004651 1.1e-12 77.0 46 78.3
Peaxi162Scf00097g00232 Petunia axillaris HOM05D006757 ORTHO05D004651 1.1e-12 77.0 46 78.3
SGA_v2.0_scaffold470G52072 Striga asiatica HOM05D006757 ORTHO05D004651 1.1e-12 77.0 47 76.6
Rhsim09G0078600 Rhododendron simsii HOM05D006757 ORTHO05D004651 1.4e-12 76.6 47 74.5
TPR.G2437 Trifolium pratense HOM05D006757 ORTHO05D004651 1.8e-12 76.3 47 74.5
HPP92_025367 Vanilla planifolia HOM05D006757 ORTHO05D004651 2.4e-12 75.9 46 73.9
MSTRG.2098 Avicennia marina HOM05D006757 ORTHO05D004651 3.1e-12 75.5 46 76.1
CANSAT78G0289 Cannabis sativa HOM05D006757 ORTHO05D004651 3.1e-12 75.5 46 73.9
Cc11_g03340 Coffea canephora HOM05D006757 ORTHO05D004651 3.1e-12 75.5 47 78.7
PSO063G3495 Papaver somniferum HOM05D006757 ORTHO05D004651 3.1e-12 75.5 46 73.9
Ciclev10006553m.g Citrus clementina HOM05D006757 ORTHO05D004651 4.0e-12 75.1 45 75.6
MELO3C005216.2 Cucumis melo HOM05D006757 ORTHO05D004651 4.0e-12 75.1 45 73.3
BcaC03g15537 Brassica carinata HOM05D006757 ORTHO05D004651 5.3e-12 74.7 87 65.5
Solyc01g007880.4 Solanum lycopersicum HOM05D006757 ORTHO05D004651 9.0e-12 73.9 46 76.1
Sopen01g003410 Solanum pennellii HOM05D006757 ORTHO05D004651 9.0e-12 73.9 46 76.1
EL10Ac6g15397 Beta vulgaris HOM05D006757 ORTHO05D004651 1.2e-11 73.6 47 63.8
AUR62003477 Chenopodium quinoa HOM05D006757 ORTHO05D004651 2.6e-11 72.4 47 66.0
Hund12802 Selenicereus undatus HOM05D006757 ORTHO05D004651 2.6e-11 72.4 46 67.4
Sc17g0005480 Simmondsia chinensis HOM05D006757 ORTHO05D004651 2.6e-11 72.4 46 67.4
CAN.G282.84 Capsicum annuum HOM05D006757 ORTHO05D004651 3.4e-11 72.0 46 73.9
Lsat_1_v5_gn_8_33901 Lactuca sativa HOM05D006757 ORTHO05D004651 4.5e-11 71.6 47 72.3
Psat6g231440 Pisum sativum HOM05D006757 ORTHO05D004651 5.8e-11 71.2 47 70.2
SEGI_38740 Sequoiadendron giganteum HOM05D006757 ORTHO05D004651 7.6e-11 70.9 46 69.6
unitig_699.g19471 Utricularia gibba HOM05D006757 ORTHO05D004651 9.9e-11 70.5 47 72.3
BolC2t09256H Brassica oleracea HOM05D006757 ORTHO05D004651 2.2e-10 69.3 46 65.2
AUR62017786 Chenopodium quinoa HOM05D006757 ORTHO05D004651 2.2e-10 69.3 47 63.8
Zm00001eb320640 Zea mays HOM05D006757 ORTHO05D004651 8.4e-10 67.4 46 63.0
DCAR_030323 Daucus carota HOM05D006757 ORTHO05D004651 1.1e-09 67.0 45 66.7
Os09g0555600 Oryza sativa ssp. japonica HOM05D006757 ORTHO05D004651 9.3e-09 63.9 46 56.5
Actinidia37475 Actinidia chinensis HOM05D006757 ORTHO05D004651 2.3e-07 59.3 66 90.9
Mapoly0058s0047 Marchantia polymorpha HOM05D006757 ORTHO05D004651 8.7e-07 57.4 45 62.2


User provided reference genes

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