Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046453 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 1.1e-139 500.0 244 100.0
vmacro09146 Vaccinium macrocarpon HOM05D006942 ORTHO05D008737 4.3e-85 318.5 281 61.6
Duzib177G1195 Durio zibethinus HOM05D006942 ORTHO05D008737 3.1e-83 312.4 282 59.6
Rhsim04G0087000 Rhododendron simsii HOM05D006942 ORTHO05D008737 3.1e-83 312.4 282 61.0
Gorai.007G287900 Gossypium raimondii HOM05D006942 ORTHO05D008737 4.5e-82 308.5 282 59.9
Gohir.D13G109500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 1.3e-81 307.0 285 60.0
Thecc.05G293100 Theobroma cacao HOM05D006942 ORTHO05D008737 2.9e-81 305.8 281 58.7
Atru.chr2.1323 Acer truncatum HOM05D006942 ORTHO05D008737 1.1e-80 303.9 282 59.9
Gorai.013G123100 Gossypium raimondii HOM05D006942 ORTHO05D008737 3.2e-80 302.4 280 59.6
COL.COLO4_13617 Corchorus olitorius HOM05D006942 ORTHO05D008737 4.2e-80 302.0 282 58.2
TAR633G0669 Trochodendron aralioides HOM05D006942 ORTHO05D008737 7.2e-80 301.2 280 57.9
Manes.08G149200 Manihot esculenta HOM05D006942 ORTHO05D008737 2.7e-79 299.3 284 60.6
QL07p020181 Quercus lobata HOM05D006942 ORTHO05D008737 6.1e-79 298.1 289 57.1
DCAR_019882 Daucus carota HOM05D006942 ORTHO05D008737 3.0e-78 295.8 281 57.3
CANSAT78G1082 Cannabis sativa HOM05D006942 ORTHO05D008737 3.9e-78 295.4 290 57.2
FAN16G3006 Fragaria x ananassa HOM05D006942 ORTHO05D008737 1.5e-77 293.5 295 54.9
Gohir.A13G105500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 1.5e-77 293.5 282 58.2
FvH4_3g25250 Fragaria vesca HOM05D006942 ORTHO05D008737 2.5e-77 292.7 295 54.6
ClCG10G013230 Citrullus lanatus HOM05D006942 ORTHO05D008737 7.4e-77 291.2 285 57.9
Haze_19409 Corylus avellana HOM05D006942 ORTHO05D008737 9.7e-77 290.8 319 52.7
Peaxi162Scf00076g01036 Petunia axillaris HOM05D006942 ORTHO05D008737 1.3e-76 290.4 299 55.5
Nn7g35832 Nelumbo nucifera HOM05D006942 ORTHO05D008737 2.2e-76 289.7 281 55.9
RcHm_v2.0_Chr5g0046891 Rosa chinensis HOM05D006942 ORTHO05D008737 2.2e-76 289.7 295 54.2
Potri.013G059500 Populus trichocarpa HOM05D006942 ORTHO05D008737 2.8e-76 289.3 283 59.0
Sed0013150 Sechium edule HOM05D006942 ORTHO05D008737 3.7e-76 288.9 285 57.5
Sabra19G0041400 Salix brachista HOM05D006942 ORTHO05D008737 6.3e-76 288.1 278 59.0
TWI34G0045 Tripterygium wilfordii HOM05D006942 ORTHO05D008737 6.3e-76 288.1 281 58.0
Ciclev10021582m.g Citrus clementina HOM05D006942 ORTHO05D008737 8.2e-76 287.7 281 57.7
FAN21G2944 Fragaria x ananassa HOM05D006942 ORTHO05D008737 8.2e-76 287.7 294 55.1
ECA233G4155 Erigeron canadensis HOM05D006942 ORTHO05D008737 2.4e-75 286.2 283 55.8
MELO3C026901.2 Cucumis melo HOM05D006942 ORTHO05D008737 5.3e-75 285.0 286 56.3
Nn2g15884 Nelumbo nucifera HOM05D002140 ORTHO05D008737 6.9e-75 284.6 283 54.8
Phvul.001G109600 Phaseolus vulgaris HOM05D006942 ORTHO05D008737 6.9e-75 284.6 293 54.9
Glyma.19G110300 Glycine max HOM05D006942 ORTHO05D008737 2.0e-74 283.1 294 54.1
Glyma.16G042200 Glycine max HOM05D006942 ORTHO05D008737 3.4e-74 282.3 287 54.7
CsaV3_3G043400 Cucumis sativus L. HOM05D006942 ORTHO05D008737 4.5e-74 282.0 286 58.0
Cpa.g.sc51.94 Carica papaya HOM05D006942 ORTHO05D008737 5.9e-74 281.6 290 56.6
PSO339G1210 Papaver somniferum HOM05D006942 ORTHO05D008737 5.9e-74 281.6 282 56.7
Actinidia38618 Actinidia chinensis HOM05D006942 ORTHO05D008737 2.9e-73 279.3 259 60.2
Lj1g0019871 Lotus japonicus HOM05D006942 ORTHO05D008737 3.8e-73 278.9 294 53.1
Eucgr.A02087 Eucalyptus grandis HOM05D006942 ORTHO05D008737 6.5e-73 278.1 281 56.6
Lsat_1_v5_gn_6_36781 Lactuca sativa HOM05D006942 ORTHO05D008737 6.5e-73 278.1 282 55.0
HanXRQChr13g0398101 Helianthus annuus HOM05D006942 ORTHO05D008737 8.5e-73 277.7 288 54.9
MSTRG.19939 Avicennia marina HOM05D006942 ORTHO05D008737 1.4e-72 276.9 291 54.6
Sed0025081 Sechium edule HOM05D006942 ORTHO05D008737 1.9e-72 276.6 281 56.2
TPR.G5873 Trifolium pratense HOM05D006942 ORTHO05D008737 4.2e-72 275.4 298 54.7
MBI11_g05460_MAGBIO Magnolia biondii HOM05D006942 ORTHO05D008737 5.5e-72 275.0 284 53.9
arahy.Tifrunner.gnm1.ann1.0W916P Arachis hypogaea HOM05D006942 ORTHO05D008737 7.2e-72 274.6 299 52.5
MD12G1002500 Malus domestica HOM05D006942 ORTHO05D008737 9.4e-72 274.2 255 60.4
PGR042G3330 Punica granatum HOM05D006942 ORTHO05D008737 1.6e-71 273.5 290 54.1
THA.LOC104823787 Tarenaya hassleriana HOM05D006942 ORTHO05D008737 6.7e-70 268.1 298 51.7
DCAR_009675 Daucus carota HOM05D006942 ORTHO05D008737 8.8e-70 267.7 288 53.5
Lalb_Chr24g0403081 Lupinus albus HOM05D006942 ORTHO05D008737 1.1e-69 267.3 280 56.1
Medtr7g085420 Medicago truncatula HOM05D006942 ORTHO05D008737 1.5e-69 266.9 291 54.0
Aqoxy2G00557 Aquilegia oxysepala HOM05D006942 ORTHO05D008737 2.0e-69 266.5 290 53.4
Gohir.D11G268200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 4.4e-69 265.4 257 57.2
VMungo1383G0897 Vigna mungo HOM05D006942 ORTHO05D008737 7.4e-69 264.6 290 53.1
GSVIVG01033386001 Vitis vinifera HOM05D006942 ORTHO05D008737 8.2e-68 261.2 179 71.5
Psat3g089160 Pisum sativum HOM05D006942 ORTHO05D008737 1.4e-67 260.4 297 51.9
SGA_v2.0_scaffold50G18512 Striga asiatica HOM05D006942 ORTHO05D008737 2.4e-67 259.6 281 53.7
CDE10G0368 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 5.3e-67 258.5 280 51.8
SpUn0001_1050 Schrenkiella parvula HOM05D006942 ORTHO05D008737 5.3e-67 258.5 283 51.2
Eucgr.K01480 Eucalyptus grandis HOM05D006942 ORTHO05D008737 7.0e-67 258.1 289 51.6
Cc00_g08890 Coffea canephora HOM05D006942 ORTHO05D008737 5.9e-66 255.0 285 51.2
Carub.0002s0962 Capsella rubella HOM05D006942 ORTHO05D008737 3.8e-65 252.3 281 50.2
CARHR028870 Cardamine hirsuta HOM05D006942 ORTHO05D008737 3.8e-65 252.3 283 52.3
AL1G64670 Arabidopsis lyrata HOM05D006942 ORTHO05D008737 2.5e-64 249.6 284 50.7
Aa31LG2G1990 Aethionema arabicum HOM05D006942 ORTHO05D008737 7.2e-64 248.1 296 50.3
A09p19530 Brassica napus HOM05D006942 ORTHO05D008737 7.2e-64 248.1 285 50.2
AT2G23840 Arabidopsis thaliana HOM05D006942 ORTHO05D008737 9.4e-64 247.7 294 48.6
Migut.J01895 Erythranthe guttata HOM05D006942 ORTHO05D008737 1.2e-63 247.3 189 66.1
ATR0697G165 Amborella trichopoda HOM05D006942 ORTHO05D008737 2.1e-63 246.5 277 51.3
BcaC04g22009 Brassica carinata HOM05D006942 ORTHO05D008737 2.7e-63 246.1 286 50.3
C09p24900 Brassica napus HOM05D006942 ORTHO05D008737 2.7e-63 246.1 286 50.3
BolC9t55381H Brassica oleracea HOM05D006942 ORTHO05D008737 2.7e-63 246.1 286 50.3
BcaB07g31088 Brassica carinata HOM05D006942 ORTHO05D008737 4.7e-63 245.4 263 52.9
PGR142G1268 Punica granatum HOM05D006942 ORTHO05D008737 1.8e-62 243.4 290 50.0
arahy.Tifrunner.gnm1.ann1.T4HPZA Arachis hypogaea HOM05D006942 ORTHO05D008737 3.9e-62 242.3 262 53.1
HPP92_018642 Vanilla planifolia HOM05D006942 ORTHO05D008737 5.2e-62 241.9 288 47.9
Lalb_Chr06g0173931 Lupinus albus HOM05D006942 ORTHO05D008737 8.8e-62 241.1 326 46.6
Thhalv10008350m.g Eutrema salsugineum HOM05D006942 ORTHO05D008737 3.3e-61 239.2 179 64.2
CDE06G2457 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 1.3e-57 227.3 178 61.8
TAR623G0107 Trochodendron aralioides HOM05D002140 ORTHO05D002382 8.5e-57 224.6 163 68.7
EL10Ac3g06808 Beta vulgaris HOM05D006942 ORTHO05D008737 1.5e-56 223.8 334 42.8
Gohir.A11G258200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 4.7e-55 218.8 245 52.7
AUR62032674 Chenopodium quinoa HOM05D006942 ORTHO05D008737 6.1e-55 218.4 164 63.4
Nitab4.5_0000911g0030 Nicotiana tabacum HOM05D006942 ORTHO05D008737 1.2e-50 204.1 222 53.2
Os07g0170200 Oryza sativa ssp. japonica HOM05D006942 ORTHO05D008737 4.5e-50 202.2 162 60.5
Lj2A357G77 Lonicera japonica HOM05D006942 ORTHO05D008737 3.8e-49 199.1 148 68.2
Sc13g0007650 Simmondsia chinensis HOM05D006942 ORTHO05D008737 1.1e-48 197.6 248 48.8
Duzib128G0620 Durio zibethinus HOM05D006942 ORTHO05D008737 1.9e-48 196.8 221 52.5
Prupe.7G002400 Prunus persica HOM05D006942 ORTHO05D008737 2.5e-48 196.4 157 63.1
Potri.019G033200 Populus trichocarpa HOM05D006942 ORTHO05D008737 1.6e-47 193.7 247 49.8
CiPaw.09G001300 Carya illinoinensis HOM05D006942 ORTHO05D008737 1.4e-46 190.7 148 64.9
Manes.09G142700 Manihot esculenta HOM05D006942 ORTHO05D008737 6.8e-46 188.3 221 53.4
Sabra13G0052800 Salix brachista HOM05D006942 ORTHO05D008737 2.8e-44 183.0 153 62.1
AagrBONN_evm.TU.Sc2ySwM_344.2088 Anthoceros agrestis HOM05D006942 ORTHO05D008737 7.0e-43 178.3 179 49.7
Ca_08258_v3 Cicer arietinum L. HOM05D006942 ORTHO05D008737 5.9e-42 175.3 147 59.9
Mapoly0043s0076 Marchantia polymorpha HOM05D006942 ORTHO05D008737 5.9e-42 175.3 220 43.6
Pp3c12_13900 Physcomitrium patens HOM05D006942 ORTHO05D008737 7.7e-42 174.9 240 42.1
Pp3c4_7620 Physcomitrium patens HOM05D006942 ORTHO05D008737 8.6e-41 171.4 261 39.5
AUR62032073 Chenopodium quinoa HOM05D006942 ORTHO05D008737 2.3e-38 163.3 164 52.4
Ah.04g153240 Amaranthus hybridus HOM05D000653 ORTHO05D003117 6.8e-38 161.8 244 43.0
SMO364G0530 Selaginella moellendorffii HOM05D006942 ORTHO05D008737 2.6e-37 159.8 181 43.6
Actinidia17307 Actinidia chinensis HOM05D006942 ORTHO05D008737 1.1e-35 154.5 83 85.5
Oeu048436.1 Olea europaea HOM05D006942 ORTHO05D008737 1.3e-33 147.5 138 56.5
SalBow2G1960 Salvia bowleyana HOM05D006942 ORTHO05D008737 9.5e-32 141.4 83 78.3
unitig_85.g27430 Utricularia gibba HOM05D006942 ORTHO05D008737 4.0e-30 136.0 233 41.6
CBR_g603 Chara braunii HOM05D006942 ORTHO05D008737 2.0e-26 123.6 195 38.5
PRCOL_00006758 Prasinoderma coloniale HOM05D006942 ORTHO05D008737 1.3e-25 120.9 178 37.1
SEGI_36650 Sequoiadendron giganteum HOM05D006942 ORTHO05D008737 1.1e-22 111.3 60 80.0
Hund24842 Selenicereus undatus HOM05D006942 ORTHO05D008737 7.5e-21 105.1 372 28.8
Cre04.g217903 Chlamydomonas reinhardtii HOM05D006942 ORTHO05D008737 9.2e-19 98.2 175 34.3
Nitab4.5_0000001g0050 Nicotiana tabacum HOM05D006942 ORTHO05D008737 5.2e-14 82.4 130 43.1
Oeu048435.1 Olea europaea HOM05D006942 ORTHO05D008737 5.4e-11 72.4 128 44.5
Zm00001eb300960 Zea mays HOM05D006942 ORTHO05D008737 1.2e-10 71.2 49 67.3
CSS0026826 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 4.7e-07 59.3 52 55.8


User provided reference genes

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