Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046447 Camellia sinensis var. sinensis HOM05D004313 ORTHO05D005036 2.0e-71 272.3 134 100.0
Actinidia04946 Actinidia chinensis HOM05D004313 ORTHO05D005036 2.5e-58 228.8 112 99.1
CSS0019418 Camellia sinensis var. sinensis HOM05D004313 ORTHO05D005036 2.5e-58 228.8 117 95.7
Rhsim08G0163500 Rhododendron simsii HOM05D004313 ORTHO05D005036 4.7e-57 224.6 112 97.3
vmacro19341 Vaccinium macrocarpon HOM05D004313 ORTHO05D005036 4.7e-57 224.6 112 97.3
Dinv07987 Davidia involucrata HOM05D004313 ORTHO05D005036 2.3e-56 222.2 112 96.4
Dinv13117 Davidia involucrata HOM05D004313 ORTHO05D005036 6.8e-56 220.7 112 94.6
Sopen06g027510 Solanum pennellii HOM05D004313 ORTHO05D005036 1.5e-55 219.5 112 94.6
Solyc06g071200.3 Solanum lycopersicum HOM05D004313 ORTHO05D005036 9.8e-55 216.9 112 92.9
Nitab4.5_0000003g0130 Nicotiana tabacum HOM05D004313 ORTHO05D005036 1.3e-54 216.5 112 93.8
Nitab4.5_0000758g0080 Nicotiana tabacum HOM05D004313 ORTHO05D005036 1.3e-54 216.5 112 93.8
Hma1.2p1_0002F.1_g003010 Hydrangea macrophylla HOM05D004313 ORTHO05D005036 1.7e-54 216.1 112 93.8
CAN.G628.58 Capsicum annuum HOM05D004313 ORTHO05D005036 3.7e-54 214.9 112 92.0
ECA232G1058 Erigeron canadensis HOM05D004313 ORTHO05D005036 6.3e-54 214.2 117 89.7
HanXRQChr09g0271451 Helianthus annuus HOM05D004313 ORTHO05D005036 1.4e-53 213.0 112 92.0
Cc04_g16080 Coffea canephora HOM05D004313 ORTHO05D005036 3.1e-53 211.8 112 90.2
Nn4g22972 Nelumbo nucifera HOM05D004313 ORTHO05D005036 7.0e-53 210.7 112 91.1
TAR374G1555 Trochodendron aralioides HOM05D004313 ORTHO05D005036 7.0e-53 210.7 115 88.7
GSVIVG01007840001 Vitis vinifera HOM05D004313 ORTHO05D005036 7.0e-53 210.7 112 91.1
Sc12g0005870 Simmondsia chinensis HOM05D004313 ORTHO05D005036 1.2e-52 209.9 112 89.3
RcHm_v2.0_Chr7g0180041 Rosa chinensis HOM05D004313 ORTHO05D005036 2.7e-52 208.8 117 85.5
Hund09391 Selenicereus undatus HOM05D004313 ORTHO05D005036 3.5e-52 208.4 117 85.5
Lsat_1_v5_gn_4_106321 Lactuca sativa HOM05D004313 ORTHO05D005036 4.5e-52 208.0 112 90.2
QL10p014006 Quercus lobata HOM05D004313 ORTHO05D005036 5.9e-52 207.6 117 86.3
Migut.D01890 Erythranthe guttata HOM05D004313 ORTHO05D005036 7.7e-52 207.2 112 89.3
TAR629G1960 Trochodendron aralioides HOM05D004313 ORTHO05D005036 7.7e-52 207.2 112 89.3
CANSAT80G2445 Cannabis sativa HOM05D004313 ORTHO05D005036 1.0e-51 206.8 117 85.5
SGA_v2.0_scaffold114G31867 Striga asiatica HOM05D004313 ORTHO05D005036 1.7e-51 206.1 113 85.8
Cfa019038 Carpinus fangiana HOM05D004313 ORTHO05D005036 2.9e-51 205.3 117 85.5
CiPaw.11G034400 Carya illinoinensis HOM05D004313 ORTHO05D005036 2.9e-51 205.3 117 85.5
Duzib205G0385 Durio zibethinus HOM05D004313 ORTHO05D005036 2.9e-51 205.3 118 85.6
PSO591G0306 Papaver somniferum HOM05D004313 ORTHO05D005036 3.8e-51 204.9 112 87.5
PSO832G0682 Papaver somniferum HOM05D004313 ORTHO05D005036 3.8e-51 204.9 112 87.5
FvH4_5g16030 Fragaria vesca HOM05D004313 ORTHO05D005036 5.0e-51 204.5 117 84.6
FAN04G0114 Fragaria x ananassa HOM05D004313 ORTHO05D005036 5.0e-51 204.5 117 84.6
Glyma.17G094800 Glycine max HOM05D004313 ORTHO05D005036 5.0e-51 204.5 117 85.5
Phvul.003G195400 Phaseolus vulgaris HOM05D004313 ORTHO05D005036 5.0e-51 204.5 117 85.5
VMungo1215G1877 Vigna mungo HOM05D004313 ORTHO05D005036 5.0e-51 204.5 117 85.5
CSS0027294 Camellia sinensis var. sinensis HOM05D004313 ORTHO05D005036 6.5e-51 204.1 137 79.6
Glyma.05G031900 Glycine max HOM05D004313 ORTHO05D005036 6.5e-51 204.1 117 85.5
Aqoxy3G03179 Aquilegia oxysepala HOM05D004313 ORTHO05D005036 1.1e-50 203.4 117 82.9
Lj4g0005973 Lotus japonicus HOM05D004313 ORTHO05D005036 1.1e-50 203.4 117 84.6
CSS0048510 Camellia sinensis var. sinensis HOM05D004313 ORTHO05D005036 1.5e-50 203.0 125 83.2
Haze_07414 Corylus avellana HOM05D004313 ORTHO05D005036 1.5e-50 203.0 112 87.5
TWI60G1492 Tripterygium wilfordii HOM05D004313 ORTHO05D005036 1.5e-50 203.0 117 83.8
DCAR_031273 Daucus carota HOM05D004313 ORTHO05D005036 1.9e-50 202.6 117 85.5
FAN13G2316 Fragaria x ananassa HOM05D004313 ORTHO05D005036 1.9e-50 202.6 117 83.8
MD06G1183500 Malus domestica HOM05D004313 ORTHO05D005036 1.9e-50 202.6 117 84.6
CSS0008025 Camellia sinensis var. sinensis HOM05D004313 ORTHO05D005036 2.5e-50 202.2 125 83.2
CSS0021086 Camellia sinensis var. sinensis HOM05D004313 ORTHO05D005036 2.5e-50 202.2 137 78.8
FAN08G2034 Fragaria x ananassa HOM05D004313 ORTHO05D005036 2.5e-50 202.2 117 83.8
arahy.Tifrunner.gnm1.ann1.PL6DWX Arachis hypogaea HOM05D004313 ORTHO05D005036 3.2e-50 201.8 117 84.6
arahy.Tifrunner.gnm1.ann1.ZX441X Arachis hypogaea HOM05D004313 ORTHO05D005036 3.2e-50 201.8 117 84.6
Eucgr.B00381 Eucalyptus grandis HOM05D004313 ORTHO05D005036 3.2e-50 201.8 112 85.7
Prupe.5G182200 Prunus persica HOM05D004313 ORTHO05D005036 3.2e-50 201.8 117 83.8
FAN18G3297 Fragaria x ananassa HOM05D004313 ORTHO05D005036 4.2e-50 201.4 117 83.8
Manes.06G098800 Manihot esculenta HOM05D004313 ORTHO05D005036 4.2e-50 201.4 112 86.6
ClCG06G016580 Citrullus lanatus HOM05D004313 ORTHO05D005036 7.2e-50 200.7 117 82.1
TWI81G0241 Tripterygium wilfordii HOM05D004313 ORTHO05D005036 7.2e-50 200.7 112 85.7
MSTRG.4395 Avicennia marina HOM05D004313 ORTHO05D005036 9.4e-50 200.3 112 86.6
Lalb_Chr07g0182441 Lupinus albus HOM05D004313 ORTHO05D005036 9.4e-50 200.3 117 82.9
EL10Ac5g10873 Beta vulgaris HOM05D004313 ORTHO05D005036 1.2e-49 199.9 117 83.8
MELO3C017136.2 Cucumis melo HOM05D004313 ORTHO05D005036 1.6e-49 199.5 117 81.2
CsaV3_1G001930 Cucumis sativus L. HOM05D004313 ORTHO05D005036 1.6e-49 199.5 117 81.2
Medtr4g107290 Medicago truncatula HOM05D004313 ORTHO05D005036 2.7e-49 198.7 117 82.9
MD14G1189400 Malus domestica HOM05D004313 ORTHO05D005036 3.6e-49 198.4 115 83.5
Psat4g054720 Pisum sativum HOM05D004313 ORTHO05D005036 3.6e-49 198.4 117 83.8
Thecc.03G071100 Theobroma cacao HOM05D004313 ORTHO05D005036 3.6e-49 198.4 112 87.5
AUR62021785 Chenopodium quinoa HOM05D004313 ORTHO05D005036 4.7e-49 198.0 112 84.8
Potri.015G068600 Populus trichocarpa HOM05D004313 ORTHO05D005036 4.7e-49 198.0 112 84.8
CiPaw.12G022100 Carya illinoinensis HOM05D004313 ORTHO05D005036 6.1e-49 197.6 117 82.9
Potri.012G073600 Populus trichocarpa HOM05D004313 ORTHO05D005036 6.1e-49 197.6 112 84.8
Gohir.A07G071100 Gossypium hirsutum HOM05D004313 ORTHO05D005036 8.0e-49 197.2 112 85.7
Gohir.D07G075600 Gossypium hirsutum HOM05D004313 ORTHO05D005036 8.0e-49 197.2 112 85.7
Gorai.001G079800 Gossypium raimondii HOM05D004313 ORTHO05D005036 8.0e-49 197.2 112 85.7
Sed0007676 Sechium edule HOM05D004313 ORTHO05D005036 1.4e-48 196.4 117 81.2
BolC3t18678H Brassica oleracea HOM05D004313 ORTHO05D005036 3.0e-48 195.3 113 83.2
BcaC01g02491 Brassica carinata HOM05D004313 ORTHO05D005036 4.0e-48 194.9 117 81.2
C03p64200 Brassica napus HOM05D004313 ORTHO05D005036 4.0e-48 194.9 112 83.9
BraA06t25884Z Brassica rapa HOM05D004313 ORTHO05D005036 4.0e-48 194.9 112 83.9
Carub.0008s2330 Capsella rubella HOM05D004313 ORTHO05D005036 4.0e-48 194.9 117 81.2
A06p29280 Brassica napus HOM05D004313 ORTHO05D005036 5.2e-48 194.5 116 81.9
CARHR276380 Cardamine hirsuta HOM05D004313 ORTHO05D005036 5.2e-48 194.5 117 80.3
THA.LOC104819430 Tarenaya hassleriana HOM05D004313 ORTHO05D005036 5.2e-48 194.5 117 81.2
Cpa.g.sc203.11 Carica papaya HOM05D004313 ORTHO05D005036 6.8e-48 194.1 118 81.4
Thhalv10003602m.g Eutrema salsugineum HOM05D004313 ORTHO05D005036 6.8e-48 194.1 117 81.2
TPR.G38443 Trifolium pratense HOM05D004313 ORTHO05D005036 6.8e-48 194.1 117 82.1
AL8G39490 Arabidopsis lyrata HOM05D004313 ORTHO05D005036 8.8e-48 193.7 117 80.3
Ciclev10018728m.g Citrus clementina HOM05D004313 ORTHO05D005036 8.8e-48 193.7 115 81.7
BcaNung01388 Brassica carinata HOM05D004313 ORTHO05D005036 2.0e-47 192.6 117 80.3
A09p07780 Brassica napus HOM05D004313 ORTHO05D005036 2.0e-47 192.6 112 83.0
BraA09t36426Z Brassica rapa HOM05D004313 ORTHO05D005036 2.0e-47 192.6 112 83.0
AUR62008311 Chenopodium quinoa HOM05D004313 ORTHO05D005036 2.0e-47 192.6 117 80.3
Sp2g25780 Schrenkiella parvula HOM05D004313 ORTHO05D005036 2.0e-47 192.6 117 80.3
Aa31LG11G1040 Aethionema arabicum HOM05D004313 ORTHO05D005036 2.6e-47 192.2 117 79.5
BcaC04g23404 Brassica carinata HOM05D004313 ORTHO05D005036 2.6e-47 192.2 117 80.3
C09p08680 Brassica napus HOM05D004313 ORTHO05D005036 2.6e-47 192.2 112 83.0
BolC9t53779H Brassica oleracea HOM05D004313 ORTHO05D005036 2.6e-47 192.2 117 80.3
AT5G62600 Arabidopsis thaliana HOM05D004313 ORTHO05D005036 3.4e-47 191.8 117 79.5
Duzib084G0573 Durio zibethinus HOM05D004313 ORTHO05D005036 1.3e-46 189.9 112 83.9
THA.LOC104818250 Tarenaya hassleriana HOM05D004313 ORTHO05D005036 1.3e-46 189.9 117 79.5
unitig_21.g20456 Utricularia gibba HOM05D004313 ORTHO05D005036 1.2e-44 183.3 112 82.1
CSS0031941 Camellia sinensis var. sinensis HOM05D004313 ORTHO05D005036 5.9e-44 181.0 112 83.0
Lj9A456G24 Lonicera japonica HOM05D004313 ORTHO05D005036 1.3e-43 179.9 112 83.0
CSS0034141 Camellia sinensis var. sinensis HOM05D004313 ORTHO05D005036 2.3e-43 179.1 112 82.1
Os10g0477800 Oryza sativa ssp. japonica HOM05D004313 ORTHO05D005036 5.0e-43 177.9 117 75.2
Zm00001eb045810 Zea mays HOM05D004313 ORTHO05D005036 5.0e-43 177.9 117 75.2
Zm00001eb221820 Zea mays HOM05D004313 ORTHO05D005036 5.0e-43 177.9 117 75.2
HPP92_025605 Vanilla planifolia HOM05D004313 ORTHO05D005036 8.6e-43 177.2 116 75.9
ATR0322G074 Amborella trichopoda HOM05D004313 ORTHO05D005036 1.9e-42 176.0 112 75.9
SEGI_36637 Sequoiadendron giganteum HOM05D004313 ORTHO05D005036 1.5e-39 166.4 116 71.6
COL.COLO4_07633 Corchorus olitorius HOM05D004313 ORTHO05D005036 2.9e-38 162.2 112 75.0
CSS0043265 Camellia sinensis var. sinensis HOM05D004313 ORTHO05D005036 4.9e-38 161.4 112 75.9
Ah.11g045580 Amaranthus hybridus HOM05D004313 ORTHO05D005036 7.0e-37 157.5 117 70.1
Ca_21869_v3 Cicer arietinum L. HOM05D004313 ORTHO05D005036 5.0e-35 151.4 90 83.3
SHI08465 Sapria himalayana HOM05D004313 ORTHO05D005036 5.0e-35 151.4 117 65.0
MBI18_g11289_MAGBIO Magnolia biondii HOM05D004313 ORTHO05D005036 1.4e-32 143.3 113 65.5
MBI18_g11290_MAGBIO Magnolia biondii HOM05D004313 ORTHO05D005036 1.4e-32 143.3 113 65.5
Mapoly0187s0007 Marchantia polymorpha HOM05D004313 ORTHO05D005036 1.5e-31 139.8 112 58.0
SMO144G0109 Selaginella moellendorffii HOM05D004313 ORTHO05D005036 5.4e-29 131.3 112 56.2
Actinidia37681 Actinidia chinensis HOM05D004313 ORTHO05D005036 4.6e-28 128.3 63 100.0
Pp3c11_11570 Physcomitrium patens HOM05D004313 ORTHO05D005036 1.3e-27 126.7 112 54.5
CBR_g24406 Chara braunii HOM05D004313 ORTHO05D005036 3.0e-27 125.6 118 55.1
Peaxi162Scf00689g00546 Petunia axillaris HOM05D004313 ORTHO05D005036 1.1e-26 123.6 71 87.3
Atru.chr9.2370 Acer truncatum HOM05D004313 ORTHO05D005036 2.8e-25 119.0 64 85.9
SalBow3G4066 Salvia bowleyana HOM05D004313 ORTHO05D005036 6.8e-24 114.4 64 87.5
Cre02.g097250 Chlamydomonas reinhardtii HOM05D004313 ORTHO05D005036 3.2e-21 105.5 141 44.7
arahy.Tifrunner.gnm1.ann1.835HL2 Arachis hypogaea HOM05D004313 ORTHO05D004397 2.8e-17 92.4 49 85.7
unitig_744.g24391 Utricularia gibba HOM05D004313 ORTHO05D005036 6.2e-17 91.3 52 80.8
arahy.Tifrunner.gnm1.ann1.225J64 Arachis hypogaea HOM05D004313 ORTHO05D005036 1.1e-16 90.5 49 83.7
PRCOL_00006613 Prasinoderma coloniale HOM05D004313 ORTHO05D005036 2.2e-14 82.8 113 38.1
Cfa021668 Carpinus fangiana HOM05D004313 ORTHO05D005036 6.6e-11 71.2 118 33.1
Lj1g0019586 Lotus japonicus HOM05D004313 ORTHO05D005036 1.5e-07 60.1 48 64.6


User provided reference genes

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