Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046424 Camellia sinensis var. sinensis HOM05D003518 ORTHO05D026429 3.9e-40 167.5 78 100.0
CSS0002907 Camellia sinensis var. sinensis HOM05D003518 ORTHO05D026429 2.0e-39 165.2 78 98.7
CSS0046664 Camellia sinensis var. sinensis HOM05D003518 ORTHO05D026429 7.5e-31 136.7 79 81.0
Dinv43741 Davidia involucrata HOM05D003518 ORTHO05D005164 8.6e-19 96.7 58 77.6
Actinidia33452 Actinidia chinensis HOM05D003518 ORTHO05D005164 1.1e-18 96.3 55 76.4
Dinv32408 Davidia involucrata HOM05D003518 ORTHO05D005164 4.2e-18 94.4 55 80.0
vmacro20980 Vaccinium macrocarpon HOM05D003518 ORTHO05D005164 1.2e-17 92.8 55 72.7
Potri.002G151800 Populus trichocarpa HOM05D003518 ORTHO05D005164 2.8e-17 91.7 55 78.2
CSS0048282 Camellia sinensis var. sinensis HOM05D003518 ORTHO05D015542 1.4e-16 89.4 56 75.0
Hma1.2p1_0132F.1_g060640 Hydrangea macrophylla HOM05D003518 ORTHO05D005164 1.8e-16 89.0 55 74.5
Sabra02G0120000 Salix brachista HOM05D003518 ORTHO05D005164 5.2e-16 87.4 56 71.4
GSVIVG01027580001 Vitis vinifera HOM05D003518 ORTHO05D005164 6.8e-16 87.0 55 70.9
Actinidia27231 Actinidia chinensis HOM05D003518 ORTHO05D026429 1.2e-15 86.3 46 80.4
CiPaw.01G258000 Carya illinoinensis HOM05D003518 ORTHO05D005164 1.2e-15 86.3 55 69.1
Rhsim01G0160000 Rhododendron simsii HOM05D003518 ORTHO05D005164 1.5e-15 85.9 55 67.3
Rhsim07G0023000 Rhododendron simsii HOM05D003518 ORTHO05D005164 3.4e-15 84.7 56 69.6
Sabra14G0053000 Salix brachista HOM05D003518 ORTHO05D005164 4.4e-15 84.3 55 69.1
Haze_16711 Corylus avellana HOM05D003518 ORTHO05D005164 5.7e-15 84.0 59 66.1
Potri.014G074300 Populus trichocarpa HOM05D003518 ORTHO05D005164 1.3e-14 82.8 55 65.5
Duzib138G0903 Durio zibethinus HOM05D003518 ORTHO05D005164 2.2e-14 82.0 55 63.6
CSS0010985 Camellia sinensis var. sinensis HOM05D003518 ORTHO05D015542 6.3e-14 80.5 41 80.5
MD07G1123700 Malus domestica HOM05D003518 ORTHO05D005164 8.3e-14 80.1 55 61.8
QL08p051054 Quercus lobata HOM05D003518 ORTHO05D005164 8.3e-14 80.1 55 65.5
CANSAT56G2265 Cannabis sativa HOM05D003518 ORTHO05D005164 1.1e-13 79.7 53 67.9
Duzib133G1143 Durio zibethinus HOM05D003518 ORTHO05D005164 1.1e-13 79.7 55 63.6
TWI59G1247 Tripterygium wilfordii HOM05D003518 ORTHO05D005164 1.1e-13 79.7 55 65.5
Thecc.01G371200 Theobroma cacao HOM05D003518 ORTHO05D005164 1.4e-13 79.3 55 63.6
MD02G1197300 Malus domestica HOM05D003518 ORTHO05D005164 2.4e-13 78.6 55 60.0
FAN10G3707 Fragaria x ananassa HOM05D003518 ORTHO05D005164 3.2e-13 78.2 55 61.8
Sc23g0003400 Simmondsia chinensis HOM05D003518 ORTHO05D005164 3.2e-13 78.2 55 67.3
CiPaw.02G164700 Carya illinoinensis HOM05D003518 ORTHO05D005164 5.4e-13 77.4 52 61.5
TAR614G0002 Trochodendron aralioides HOM05D003518 ORTHO05D005164 5.4e-13 77.4 55 65.5
Atru.chr5.372 Acer truncatum HOM05D003518 ORTHO05D005164 7.0e-13 77.0 55 65.5
RcHm_v2.0_Chr1g0351731 Rosa chinensis HOM05D003518 ORTHO05D005164 7.0e-13 77.0 55 65.5
TWI14G0835 Tripterygium wilfordii HOM05D003518 ORTHO05D005164 7.0e-13 77.0 55 61.8
COL.COLO4_12652 Corchorus olitorius HOM05D003518 ORTHO05D005164 9.2e-13 76.6 55 63.6
Manes.01G263400 Manihot esculenta HOM05D003518 ORTHO05D005164 9.2e-13 76.6 59 55.9
Manes.05G041800 Manihot esculenta HOM05D003518 ORTHO05D005164 9.2e-13 76.6 55 58.2
Cpa.g.sc18.167 Carica papaya HOM05D003518 ORTHO05D005164 1.2e-12 76.3 55 60.0
Oeu024431.2 Olea europaea HOM05D003518 ORTHO05D005164 1.2e-12 76.3 55 61.8
Migut.B01669 Erythranthe guttata HOM05D003518 ORTHO05D005164 1.6e-12 75.9 52 63.5
THA.LOC104802006 Tarenaya hassleriana HOM05D003518 ORTHO05D005164 1.6e-12 75.9 55 58.2
DCAR_006891 Daucus carota HOM05D003518 ORTHO05D005164 2.0e-12 75.5 55 60.0
DCAR_015924 Daucus carota HOM05D003518 ORTHO05D005164 2.0e-12 75.5 55 65.5
Eucgr.E01329 Eucalyptus grandis HOM05D003518 ORTHO05D005164 3.5e-12 74.7 55 58.2
FvH4_7g12710 Fragaria vesca HOM05D003518 ORTHO05D005164 3.5e-12 74.7 55 60.0
FAN01G1761 Fragaria x ananassa HOM05D003518 ORTHO05D005164 3.5e-12 74.7 55 60.0
FAN06G1131 Fragaria x ananassa HOM05D003518 ORTHO05D005164 3.5e-12 74.7 55 60.0
FAN06G5121 Fragaria x ananassa HOM05D003518 ORTHO05D005164 3.5e-12 74.7 55 60.0
Gohir.A11G083800 Gossypium hirsutum HOM05D003518 ORTHO05D005164 3.5e-12 74.7 59 55.9
Psat3g059680 Pisum sativum HOM05D003518 ORTHO05D022796 4.6e-12 74.3 61 59.0
Psat4g198920 Pisum sativum HOM05D003518 ORTHO05D005164 4.6e-12 74.3 61 59.0
Prupe.2G151300 Prunus persica HOM05D003518 ORTHO05D005164 4.6e-12 74.3 57 61.4
CARHR140890 Cardamine hirsuta HOM05D003518 ORTHO05D005164 5.9e-12 73.9 55 58.2
Cc02_g37010 Coffea canephora HOM05D003518 ORTHO05D005164 5.9e-12 73.9 52 59.6
PGR042G3961 Punica granatum HOM05D003518 ORTHO05D005164 5.9e-12 73.9 55 58.2
Gohir.D11G088000 Gossypium hirsutum HOM05D003518 ORTHO05D005164 7.8e-12 73.6 55 58.2
Gorai.007G093900 Gossypium raimondii HOM05D003518 ORTHO05D005164 7.8e-12 73.6 55 58.2
CSS0016703 Camellia sinensis var. sinensis HOM05D003518 ORTHO05D015542 1.0e-11 73.2 41 78.0
Ciclev10019439m.g Citrus clementina HOM05D003518 ORTHO05D005164 1.0e-11 73.2 59 57.6
FAN10G3827 Fragaria x ananassa HOM05D003518 ORTHO05D005164 1.0e-11 73.2 55 58.2
Carub.0004s2832 Capsella rubella HOM05D003518 ORTHO05D005164 1.3e-11 72.8 55 58.2
AL4G44840 Arabidopsis lyrata HOM05D003518 ORTHO05D005164 1.7e-11 72.4 55 56.4
Nn6g34312 Nelumbo nucifera HOM05D003518 ORTHO05D005164 1.7e-11 72.4 55 56.4
Gohir.A12G102800 Gossypium hirsutum HOM05D003518 ORTHO05D005164 2.9e-11 71.6 61 52.5
CAN.G170.67 Capsicum annuum HOM05D003518 ORTHO05D005164 3.9e-11 71.2 55 58.2
Gorai.008G115300 Gossypium raimondii HOM05D003518 ORTHO05D005164 5.0e-11 70.9 55 54.5
Lj3g0010840 Lotus japonicus HOM05D003518 ORTHO05D005164 6.6e-11 70.5 55 58.2
Ca_23782_v3 Cicer arietinum L. HOM05D003518 ORTHO05D005164 8.6e-11 70.1 55 58.2
FAN03G3110 Fragaria x ananassa HOM05D003518 ORTHO05D005164 1.5e-10 69.3 55 60.0
SGA_v2.0_scaffold153G37052 Striga asiatica HOM05D003518 ORTHO05D005164 1.5e-10 69.3 52 59.6
Aa31LG1G27140 Aethionema arabicum HOM05D003518 ORTHO05D005164 4.3e-10 67.8 55 52.7
A03p25290 Brassica napus HOM05D003518 ORTHO05D005164 4.3e-10 67.8 55 50.9
SalBow7G3081 Salvia bowleyana HOM05D003518 ORTHO05D005164 4.3e-10 67.8 55 52.7
MSTRG.20781 Avicennia marina HOM05D003518 ORTHO05D005164 5.6e-10 67.4 52 55.8
Peaxi162Scf00021g00116 Petunia axillaris HOM05D003518 ORTHO05D005164 5.6e-10 67.4 55 58.2
TAR636G1560 Trochodendron aralioides HOM05D003518 ORTHO05D005164 5.6e-10 67.4 55 56.4
BcaC01g05115 Brassica carinata HOM05D003518 ORTHO05D005164 7.3e-10 67.0 55 50.9
C03p30180 Brassica napus HOM05D003518 ORTHO05D005164 7.3e-10 67.0 55 50.9
Nitab4.5_0001127g0040 Nicotiana tabacum HOM05D003518 ORTHO05D005164 7.3e-10 67.0 55 54.5
Sopen01g037730 Solanum pennellii HOM05D003518 ORTHO05D005164 9.5e-10 66.6 55 56.4
BolC3t15366H Brassica oleracea HOM05D003518 ORTHO05D005164 1.6e-09 65.9 55 50.9
Solyc01g091950.4 Solanum lycopersicum HOM05D003518 ORTHO05D005164 1.6e-09 65.9 55 56.4
BcaC02g07077 Brassica carinata HOM05D003518 ORTHO05D005164 2.1e-09 65.5 55 50.9
C04p71760 Brassica napus HOM05D003518 ORTHO05D005164 2.1e-09 65.5 55 50.9
BolC4t28675H Brassica oleracea HOM05D003518 ORTHO05D005164 2.1e-09 65.5 55 50.9
BraA03t11733Z Brassica rapa HOM05D003518 ORTHO05D005164 2.1e-09 65.5 55 49.1
Thhalv10001388m.g Eutrema salsugineum HOM05D003518 ORTHO05D005164 2.1e-09 65.5 55 50.9
Ah.05g175810 Amaranthus hybridus HOM05D003518 ORTHO05D005164 2.8e-09 65.1 55 43.6
A04p33950 Brassica napus HOM05D003518 ORTHO05D005164 2.8e-09 65.1 55 50.9
BraA04t18856Z Brassica rapa HOM05D003518 ORTHO05D005164 2.8e-09 65.1 55 50.9
AUR62033382 Chenopodium quinoa HOM05D003518 ORTHO05D005164 4.7e-09 64.3 55 47.3
MBI11_g05096_MAGBIO Magnolia biondii HOM05D003518 ORTHO05D005164 6.2e-09 63.9 53 50.9
Sp4g27710 Schrenkiella parvula HOM05D003518 ORTHO05D005164 6.2e-09 63.9 55 49.1
BcaB06g29432 Brassica carinata HOM05D003518 ORTHO05D005164 1.0e-08 63.2 55 49.1
EL10Ac1g00954 Beta vulgaris HOM05D003518 ORTHO05D005164 1.4e-08 62.8 55 47.3
PSO478G4904 Papaver somniferum HOM05D003518 ORTHO05D005164 2.3e-08 62.0 51 56.9
PSO782G5439 Papaver somniferum HOM05D003518 ORTHO05D005164 2.3e-08 62.0 53 54.7
BcaB01g03262 Brassica carinata HOM05D003518 ORTHO05D005164 3.1e-08 61.6 55 47.3
Lsat_1_v5_gn_4_37220 Lactuca sativa HOM05D003518 ORTHO05D005164 3.1e-08 61.6 55 50.9
Nn1g01294 Nelumbo nucifera HOM05D003518 ORTHO05D005164 4.0e-08 61.2 55 49.1
arahy.Tifrunner.gnm1.ann1.N1W82K Arachis hypogaea HOM05D003518 ORTHO05D005164 5.2e-08 60.8 55 52.7
Medtr8g033180 Medicago truncatula HOM05D003518 ORTHO05D005164 6.8e-08 60.5 55 52.7
Aqoxy7G00493 Aquilegia oxysepala HOM05D003518 ORTHO05D005164 8.9e-08 60.1 55 50.9
Glyma.03G019200 Glycine max HOM05D003518 ORTHO05D005164 1.2e-07 59.7 55 52.7
Lalb_Chr17g0340051 Lupinus albus HOM05D003518 ORTHO05D005164 1.2e-07 59.7 55 52.7
Nitab4.5_0003182g0050 Nicotiana tabacum HOM05D003518 ORTHO05D005164 1.2e-07 59.7 43 62.8
arahy.Tifrunner.gnm1.ann1.4HY23M Arachis hypogaea HOM05D003518 ORTHO05D005164 1.5e-07 59.3 55 50.9
ECA234G2542 Erigeron canadensis HOM05D003518 ORTHO05D005164 1.5e-07 59.3 51 52.9
HanXRQChr16g0523541 Helianthus annuus HOM05D003518 ORTHO05D005164 1.5e-07 59.3 55 52.7
MBI16_g42579_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009834 1.5e-07 59.3 46 52.2
Hund16973 Selenicereus undatus HOM05D003518 ORTHO05D005164 1.5e-07 59.3 49 44.9
AUR62004275 Chenopodium quinoa HOM05D003518 ORTHO05D005164 2.6e-07 58.5 55 43.6
Lsat_1_v5_gn_7_6740 Lactuca sativa HOM05D003518 ORTHO05D005164 5.8e-07 57.4 51 54.9
Lalb_Chr04g0256591 Lupinus albus HOM05D003518 ORTHO05D005164 7.5e-07 57.0 53 52.8
VMungo0331G0661 Vigna mungo HOM05D003518 ORTHO05D005164 9.8e-07 56.6 48 56.2
Phvul.010G088200 Phaseolus vulgaris HOM05D003518 ORTHO05D005164 2.9e-06 55.1 48 54.2
Glyma.07G080800 Glycine max HOM05D003518 ORTHO05D005164 3.7e-06 54.7 55 50.9
ECA236G3950 Erigeron canadensis HOM05D003518 ORTHO05D005164 4.9e-06 54.3 55 49.1
HanXRQChr04g0122151 Helianthus annuus HOM05D003518 ORTHO05D005164 8.3e-06 53.5 55 49.1


User provided reference genes

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