Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046405 Camellia sinensis var. sinensis HOM05D007351 ORTHO05D009386 4.3e-115 417.9 199 100.0
Actinidia15698 Actinidia chinensis HOM05D007351 ORTHO05D009386 7.8e-101 370.5 199 89.4
GSVIVG01035772001 Vitis vinifera HOM05D007351 ORTHO05D009386 5.8e-96 354.4 201 87.1
Hma1.2p1_0000F.1_g000940 Hydrangea macrophylla HOM05D007351 ORTHO05D009386 2.2e-95 352.4 200 86.0
Prupe.1G471900 Prunus persica HOM05D007351 ORTHO05D009386 2.7e-93 345.5 203 84.2
Sabra06G0194800 Salix brachista HOM05D007351 ORTHO05D009386 3.5e-93 345.1 200 84.0
MBI04_g00950_MAGBIO Magnolia biondii HOM05D007351 ORTHO05D009386 2.3e-92 342.4 202 83.7
Potri.006G249000 Populus trichocarpa HOM05D007351 ORTHO05D009386 3.0e-92 342.0 202 83.7
TWI34G1290 Tripterygium wilfordii HOM05D007351 ORTHO05D009386 6.6e-92 340.9 205 82.4
Nn2g11909 Nelumbo nucifera HOM05D007351 ORTHO05D009386 1.1e-91 340.1 201 83.6
FvH4_2g29770 Fragaria vesca HOM05D007351 ORTHO05D009386 1.9e-91 339.3 200 83.0
TAR625G1337 Trochodendron aralioides HOM05D007351 ORTHO05D009386 4.3e-91 338.2 200 82.5
CiPaw.08G014100 Carya illinoinensis HOM05D007351 ORTHO05D009386 1.3e-90 336.7 202 81.7
FAN27G2935 Fragaria x ananassa HOM05D007351 ORTHO05D009386 2.1e-90 335.9 200 82.5
FAN24G0983 Fragaria x ananassa HOM05D007351 ORTHO05D009386 2.8e-90 335.5 200 82.5
MD08G1141900 Malus domestica HOM05D007351 ORTHO05D009386 6.2e-90 334.3 201 83.1
Lj8A616G46 Lonicera japonica HOM05D007351 ORTHO05D009386 1.1e-89 333.6 202 82.7
FAN15G3188 Fragaria x ananassa HOM05D007351 ORTHO05D009386 1.4e-89 333.2 200 82.0
Manes.16G118400 Manihot esculenta HOM05D007351 ORTHO05D009386 2.4e-89 332.4 204 81.4
Rhsim07G0150700 Rhododendron simsii HOM05D007351 ORTHO05D009386 9.0e-89 330.5 211 77.7
RcHm_v2.0_Chr6g0298791 Rosa chinensis HOM05D007351 ORTHO05D009386 3.4e-88 328.6 176 87.5
Atru.chr7.2359 Acer truncatum HOM05D007351 ORTHO05D009386 7.6e-88 327.4 203 81.3
Migut.A00300 Erythranthe guttata HOM05D007351 ORTHO05D009386 7.6e-88 327.4 185 85.9
MSTRG.11754 Avicennia marina HOM05D007351 ORTHO05D009386 2.2e-87 325.9 174 89.7
Lsat_1_v5_gn_6_21681 Lactuca sativa HOM05D007351 ORTHO05D009386 2.2e-87 325.9 199 82.4
HanXRQChr13g0402411 Helianthus annuus HOM05D007351 ORTHO05D009386 3.8e-87 325.1 199 81.4
PSO017G1621 Papaver somniferum HOM05D007351 ORTHO05D009386 3.8e-87 325.1 172 89.0
PSO170G0157 Papaver somniferum HOM05D007351 ORTHO05D009386 4.9e-87 324.7 172 88.4
Solyc08g067430.4 Solanum lycopersicum HOM05D007351 ORTHO05D009386 1.1e-86 323.6 201 79.1
Eucgr.C01805 Eucalyptus grandis HOM05D007351 ORTHO05D009386 1.4e-86 323.2 202 79.7
PGSC0003DMG400007382 Solanum tuberosum HOM05D007351 ORTHO05D009386 1.4e-86 323.2 201 78.6
Cpa.g.sc91.32 Carica papaya HOM05D007351 ORTHO05D009386 3.2e-86 322.0 212 76.9
arahy.Tifrunner.gnm1.ann1.C4YKET Arachis hypogaea HOM05D007351 ORTHO05D009386 4.2e-86 321.6 192 78.6
Hund03010 Selenicereus undatus HOM05D007351 ORTHO05D009386 5.5e-86 321.2 198 77.3
COL.COLO4_24001 Corchorus olitorius HOM05D007351 ORTHO05D009386 7.1e-86 320.9 197 79.2
Peaxi162Scf00251g01128 Petunia axillaris HOM05D007351 ORTHO05D009386 9.3e-86 320.5 199 79.4
SGA_v2.0_scaffold448G51771 Striga asiatica HOM05D007351 ORTHO05D009386 1.2e-85 320.1 189 83.6
Thecc.09G147600 Theobroma cacao HOM05D007351 ORTHO05D009386 2.1e-85 319.3 198 78.8
EL10Ac2g02569 Beta vulgaris HOM05D007351 ORTHO05D009386 3.5e-85 318.5 205 76.6
Gorai.004G110800 Gossypium raimondii HOM05D007351 ORTHO05D009386 3.5e-85 318.5 196 78.6
AUR62032351 Chenopodium quinoa HOM05D007351 ORTHO05D009386 1.0e-84 317.0 211 73.9
Nitab4.5_0000508g0220 Nicotiana tabacum HOM05D007351 ORTHO05D009386 1.3e-84 316.6 200 77.0
Glyma.06G071600 Glycine max HOM05D007351 ORTHO05D009386 1.8e-84 316.2 171 84.8
ECA233G0102 Erigeron canadensis HOM05D007351 ORTHO05D009386 2.3e-84 315.8 204 76.0
Ciclev10009550m.g Citrus clementina HOM05D007351 ORTHO05D009386 3.9e-84 315.1 171 88.3
CARHR115710 Cardamine hirsuta HOM05D007351 ORTHO05D009386 5.1e-84 314.7 204 76.0
Thhalv10000330m.g Eutrema salsugineum HOM05D007351 ORTHO05D009386 6.7e-84 314.3 201 76.1
Ca_15711_v3 Cicer arietinum L. HOM05D007351 ORTHO05D009386 1.1e-83 313.5 188 79.8
Cc11_g01660 Coffea canephora HOM05D007351 ORTHO05D009386 1.1e-83 313.5 194 80.4
Medtr3g107860 Medicago truncatula HOM05D007351 ORTHO05D009386 2.5e-83 312.4 183 80.3
Psat5g027160 Pisum sativum HOM05D007351 ORTHO05D009386 3.3e-83 312.0 183 80.3
Sc06g0000580 Simmondsia chinensis HOM05D007351 ORTHO05D009386 3.3e-83 312.0 198 75.3
Glyma.04G069700 Glycine max HOM05D007351 ORTHO05D009386 4.3e-83 311.6 171 84.2
Phvul.009G096100 Phaseolus vulgaris HOM05D007351 ORTHO05D009386 9.6e-83 310.5 171 84.2
BcaC02g08337 Brassica carinata HOM05D007351 ORTHO05D009386 1.3e-82 310.1 166 86.1
A04p19820 Brassica napus HOM05D007351 ORTHO05D009386 1.3e-82 310.1 202 75.7
C04p55560 Brassica napus HOM05D007351 ORTHO05D009386 1.3e-82 310.1 166 86.1
BolC4t27080H Brassica oleracea HOM05D007351 ORTHO05D009386 1.3e-82 310.1 166 86.1
BraA04t17570Z Brassica rapa HOM05D007351 ORTHO05D009386 1.3e-82 310.1 201 75.6
Carub.0004s0533 Capsella rubella HOM05D007351 ORTHO05D009386 1.3e-82 310.1 197 76.1
arahy.Tifrunner.gnm1.ann1.8MNE4Q Arachis hypogaea HOM05D007351 ORTHO05D009386 1.6e-82 309.7 213 71.4
BcaB06g28079 Brassica carinata HOM05D007351 ORTHO05D009386 1.6e-82 309.7 202 75.7
Nitab4.5_0002339g0070 Nicotiana tabacum HOM05D007351 ORTHO05D009386 1.6e-82 309.7 203 75.9
AL4G17070 Arabidopsis lyrata HOM05D007351 ORTHO05D009386 2.8e-82 308.9 206 74.3
Sopen08g021360 Solanum pennellii HOM05D007351 ORTHO05D009386 2.8e-82 308.9 201 76.6
Lalb_Chr23g0268831 Lupinus albus HOM05D007351 ORTHO05D009386 3.7e-82 308.5 193 78.2
Aqoxy7G02003 Aquilegia oxysepala HOM05D007351 ORTHO05D009386 4.8e-82 308.1 236 68.6
Lj1g0014043 Lotus japonicus HOM05D007351 ORTHO05D009386 4.8e-82 308.1 172 84.3
THA.LOC104804500 Tarenaya hassleriana HOM05D007351 ORTHO05D009386 4.8e-82 308.1 167 87.4
AT2G25605 Arabidopsis thaliana HOM05D007351 ORTHO05D009386 6.2e-82 307.8 166 84.9
Gohir.A08G090000 Gossypium hirsutum HOM05D007351 ORTHO05D009386 6.2e-82 307.8 196 76.5
Aa31sc586G10 Aethionema arabicum HOM05D007351 ORTHO05D009386 6.9e-81 304.3 201 73.1
CDE06G1133 Ceratophyllum demersum HOM05D007351 ORTHO05D009386 6.9e-81 304.3 196 75.5
unitig_32.g11667 Utricularia gibba HOM05D007351 ORTHO05D009386 3.4e-80 302.0 181 82.9
MELO3C003678.2 Cucumis melo HOM05D007351 ORTHO05D009386 7.6e-80 300.8 205 71.7
vmacro05202 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 3.8e-79 298.5 153 91.5
TPR.G27335 Trifolium pratense HOM05D007351 ORTHO05D009386 6.5e-79 297.7 184 77.2
Sed0005695 Sechium edule HOM05D007351 ORTHO05D009386 2.5e-78 295.8 204 71.1
Os05g0574700 Oryza sativa ssp. japonica HOM05D007351 ORTHO05D009386 3.2e-78 295.4 180 80.0
ATR0680G179 Amborella trichopoda HOM05D007351 ORTHO05D009386 3.5e-77 292.0 180 78.9
VMungo1309G2796 Vigna mungo HOM05D007351 ORTHO05D009386 2.4e-73 279.3 181 76.2
AUR62041846 Chenopodium quinoa HOM05D007351 ORTHO05D009386 8.5e-71 270.8 164 79.3
Duzib150G1343 Durio zibethinus HOM05D007351 ORTHO05D009386 3.2e-70 268.9 171 79.5
DCAR_003046 Daucus carota HOM05D007351 ORTHO05D009386 7.2e-70 267.7 177 79.1
SEGI_27006 Sequoiadendron giganteum HOM05D007351 ORTHO05D009386 2.7e-69 265.8 167 73.7
Gohir.D08G102800 Gossypium hirsutum HOM05D007351 ORTHO05D009386 4.6e-69 265.0 171 77.8
QL12p031742 Quercus lobata HOM05D007351 ORTHO05D009386 6.1e-69 264.6 168 78.6
PGR031G1798 Punica granatum HOM05D007351 ORTHO05D009386 5.1e-68 261.5 182 72.0
CsaV3_3G046600 Cucumis sativus L. HOM05D007351 ORTHO05D009386 1.6e-66 256.5 141 83.7
Sp4g05090 Schrenkiella parvula HOM05D007351 ORTHO05D009386 4.1e-65 251.9 137 83.9
CANSAT11G2455 Cannabis sativa HOM05D007351 ORTHO05D009386 2.0e-64 249.6 167 73.7
Mapoly0036s0071 Marchantia polymorpha HOM05D007351 ORTHO05D009386 2.6e-64 249.2 171 67.8
Zm00001eb344390 Zea mays HOM05D007351 ORTHO05D009386 4.5e-64 248.4 137 84.7
Oeu045191.1 Olea europaea HOM05D007351 ORTHO05D009386 2.1e-61 239.6 161 75.8
SMO269G0024 Selaginella moellendorffii HOM05D007351 ORTHO05D009386 1.8e-60 236.5 163 67.5
Pp3c17_16830 Physcomitrium patens HOM05D007351 ORTHO05D009386 8.2e-58 227.6 166 63.9
AagrBONN_evm.TU.Sc2ySwM_228.1243 Anthoceros agrestis HOM05D007351 ORTHO05D009386 2.6e-56 222.6 152 70.4
Haze_21592 Corylus avellana HOM05D007351 ORTHO05D009386 1.7e-55 219.9 111 91.0
CBR_g40414 Chara braunii HOM05D007351 ORTHO05D009386 1.6e-48 196.8 159 59.1
CANSAT54G2502 Cannabis sativa HOM05D007351 ORTHO05D009386 6.5e-47 191.4 138 70.3
Cre17.g746897 Chlamydomonas reinhardtii HOM05D007351 ORTHO05D009386 2.3e-28 129.8 140 43.6
vmacro05206 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 9.8e-19 97.8 165 40.0
Pp3c16_22900 Physcomitrium patens HOM05D033550 ORTHO05D017832 3.1e-12 76.3 133 36.8
Lsat_1_v5_gn_4_127141 Lactuca sativa HOM05D007351 ORTHO05D009386 8.9e-12 74.7 38 84.2
SMO356G0017 Selaginella moellendorffii HOM05D007351 ORTHO05D017832 5.0e-07 58.9 133 36.8
Cre16.g683300 Chlamydomonas reinhardtii HOM05D027270 ORTHO05D017832 6.6e-07 58.5 132 33.3
Mapoly0006s0206 Marchantia polymorpha HOM05D017363 ORTHO05D018319 9.5e-06 54.7 155 23.2


User provided reference genes

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