Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046404 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 1.0e-73 280.0 148 100.0
CSS0020008 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 4.1e-46 188.3 105 97.1
Eucgr.E02397 Eucalyptus grandis HOM05D004997 ORTHO05D005921 3.5e-45 185.3 105 95.2
Dinv32261 Davidia involucrata HOM05D004997 ORTHO05D005921 1.3e-44 183.3 105 93.3
Migut.M00914 Erythranthe guttata HOM05D004997 ORTHO05D005921 1.7e-44 183.0 105 93.3
MSTRG.16239 Avicennia marina HOM05D004997 ORTHO05D005921 2.3e-44 182.6 105 92.4
Rhsim13G0211800 Rhododendron simsii HOM05D004997 ORTHO05D005921 2.3e-44 182.6 108 91.7
Actinidia07691 Actinidia chinensis HOM05D004997 ORTHO05D005921 3.8e-44 181.8 105 93.3
Lsat_1_v5_gn_1_91801 Lactuca sativa HOM05D004997 ORTHO05D005921 3.8e-44 181.8 115 84.3
Prupe.3G104900 Prunus persica HOM05D004997 ORTHO05D005921 6.5e-44 181.0 125 76.8
Nn4g24866 Nelumbo nucifera HOM05D004997 ORTHO05D005921 8.6e-44 180.6 104 92.3
Sed0005528 Sechium edule HOM05D004997 ORTHO05D005921 8.6e-44 180.6 105 92.4
CANSAT35G1260 Cannabis sativa HOM05D004997 ORTHO05D005921 1.1e-43 180.3 105 91.4
Cfa000953 Carpinus fangiana HOM05D004997 ORTHO05D005921 1.1e-43 180.3 105 92.4
ClCG03G007080 Citrullus lanatus HOM05D004997 ORTHO05D005921 1.1e-43 180.3 106 90.6
ECA233G0220 Erigeron canadensis HOM05D004997 ORTHO05D005921 1.1e-43 180.3 105 91.4
TWI38G0351 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 1.5e-43 179.9 105 91.4
Hund21531 Selenicereus undatus HOM05D004997 ORTHO05D005921 1.9e-43 179.5 109 86.2
TWI38G1166 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 1.9e-43 179.5 105 91.4
TAR626G0896 Trochodendron aralioides HOM05D004997 ORTHO05D005921 2.5e-43 179.1 105 90.5
CiPaw.10G092400 Carya illinoinensis HOM05D004997 ORTHO05D005921 3.3e-43 178.7 137 75.2
Lalb_Chr05g0222161 Lupinus albus HOM05D004997 ORTHO05D005921 3.3e-43 178.7 105 90.5
Sed0006544 Sechium edule HOM05D004997 ORTHO05D005921 4.2e-43 178.3 105 91.4
Ciclev10017164m.g Citrus clementina HOM05D004997 ORTHO05D005921 5.5e-43 177.9 105 91.4
Lj5g0010316 Lotus japonicus HOM05D004997 ORTHO05D005921 5.5e-43 177.9 105 89.5
Medtr5g055650 Medicago truncatula HOM05D004997 ORTHO05D005921 5.5e-43 177.9 105 89.5
VMungo0251G3606 Vigna mungo HOM05D004997 ORTHO05D005921 7.2e-43 177.6 104 91.3
CiPaw.09G124400 Carya illinoinensis HOM05D004997 ORTHO05D005921 9.5e-43 177.2 105 88.6
Potri.004G131900 Populus trichocarpa HOM05D004997 ORTHO05D005921 9.5e-43 177.2 105 91.4
Glyma.12G006600 Glycine max HOM05D004997 ORTHO05D005921 1.2e-42 176.8 104 90.4
HanXRQChr11g0340951 Helianthus annuus HOM05D004997 ORTHO05D005921 1.2e-42 176.8 105 89.5
Lj4g0009583 Lotus japonicus HOM05D004997 ORTHO05D005921 1.2e-42 176.8 105 88.6
SGA_v2.0_scaffold1G00167 Striga asiatica HOM05D004997 ORTHO05D005921 1.2e-42 176.8 105 89.5
GSVIVG01021444001 Vitis vinifera HOM05D004997 ORTHO05D005921 1.2e-42 176.8 105 89.5
MSTRG.7483 Avicennia marina HOM05D004997 ORTHO05D005921 1.6e-42 176.4 105 90.5
Gohir.A10G040300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.6e-42 176.4 105 89.5
Gorai.011G043400 Gossypium raimondii HOM05D004997 ORTHO05D005921 2.1e-42 176.0 105 89.5
Phvul.002G321900 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 2.1e-42 176.0 105 88.6
FAN25G0101 Fragaria x ananassa HOM05D004997 ORTHO05D005921 2.8e-42 175.6 105 88.6
Glyma.08G046600 Glycine max HOM05D004997 ORTHO05D005921 2.8e-42 175.6 104 89.4
THA.LOC104814295 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 2.8e-42 175.6 105 89.5
MELO3C002717.2 Cucumis melo HOM05D004997 ORTHO05D005921 3.6e-42 175.3 105 88.6
Gohir.D05G151300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 3.6e-42 175.3 105 89.5
Gorai.009G155300 Gossypium raimondii HOM05D004997 ORTHO05D005921 3.6e-42 175.3 105 89.5
Psat2g084800 Pisum sativum HOM05D004997 ORTHO05D005921 3.6e-42 175.3 105 88.6
unitig_32.g11442 Utricularia gibba HOM05D004997 ORTHO05D005921 3.6e-42 175.3 105 89.5
FAN11G3072 Fragaria x ananassa HOM05D004997 ORTHO05D005921 4.7e-42 174.9 105 88.6
MBI07_g26358_MAGBIO Magnolia biondii HOM05D004997 ORTHO05D005921 4.7e-42 174.9 105 87.6
MD05G1284500 Malus domestica HOM05D004997 ORTHO05D005921 4.7e-42 174.9 105 89.5
PSO339G4484 Papaver somniferum HOM05D004997 ORTHO05D005921 4.7e-42 174.9 105 88.6
RcHm_v2.0_Chr5g0013981 Rosa chinensis HOM05D004997 ORTHO05D005921 4.7e-42 174.9 105 88.6
THA.LOC104812669 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 6.1e-42 174.5 105 88.6
Thecc.06G151500 Theobroma cacao HOM05D004997 ORTHO05D005921 6.1e-42 174.5 105 89.5
FvH4_3g05660 Fragaria vesca HOM05D004997 ORTHO05D005921 1.4e-41 173.3 105 87.6
MD10G1262900 Malus domestica HOM05D004997 ORTHO05D005921 1.4e-41 173.3 105 88.6
PSO384G3576 Papaver somniferum HOM05D004997 ORTHO05D005921 1.4e-41 173.3 105 87.6
Solyc08g016420.3 Solanum lycopersicum HOM05D004997 ORTHO05D005921 1.4e-41 173.3 105 84.8
CARHR029400 Cardamine hirsuta HOM05D004997 ORTHO05D005921 1.8e-41 172.9 105 87.6
Sp1g25870 Schrenkiella parvula HOM05D004997 ORTHO05D005921 1.8e-41 172.9 104 87.5
Carub.0001s2824 Capsella rubella HOM05D004997 ORTHO05D005921 2.3e-41 172.6 105 85.7
Duzib192G0549 Durio zibethinus HOM05D004997 ORTHO05D005921 2.3e-41 172.6 106 89.6
FAN21G2809 Fragaria x ananassa HOM05D004997 ORTHO05D005921 3.0e-41 172.2 105 87.6
HanXRQChr01g0020611 Helianthus annuus HOM05D004997 ORTHO05D005921 3.0e-41 172.2 105 89.5
Gohir.A05G148700 Gossypium hirsutum HOM05D004997 ORTHO05D005921 5.2e-41 171.4 105 88.6
Sopen08g006800 Solanum pennellii HOM05D004997 ORTHO05D005921 5.2e-41 171.4 105 83.8
AL1G43880 Arabidopsis lyrata HOM05D004997 ORTHO05D005921 6.8e-41 171.0 105 84.8
AT1G29990 Arabidopsis thaliana HOM05D004997 ORTHO05D005921 6.8e-41 171.0 105 84.8
Prupe.4G079900 Prunus persica HOM05D004997 ORTHO05D005921 6.8e-41 171.0 105 86.7
arahy.Tifrunner.gnm1.ann1.06CE9J Arachis hypogaea HOM05D004997 ORTHO05D005921 1.2e-40 170.2 113 83.2
Gohir.D10G041200 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.2e-40 170.2 105 87.6
Gorai.002G185400 Gossypium raimondii HOM05D004997 ORTHO05D005921 1.5e-40 169.9 105 87.6
Aqoxy3G00593 Aquilegia oxysepala HOM05D004997 ORTHO05D005921 2.0e-40 169.5 105 84.8
Cc02_g37190 Coffea canephora HOM05D004997 ORTHO05D005921 2.0e-40 169.5 105 84.8
FAN16G0953 Fragaria x ananassa HOM05D004997 ORTHO05D005921 2.0e-40 169.5 105 84.8
SGA_v2.0_scaffold333G48998 Striga asiatica HOM05D004997 ORTHO05D005921 3.4e-40 168.7 118 80.5
BcaC06g35482 Brassica carinata HOM05D004997 ORTHO05D005921 5.7e-40 167.9 104 84.6
BolC7t42045H Brassica oleracea HOM05D004997 ORTHO05D005921 5.7e-40 167.9 104 84.6
HPP92_006252 Vanilla planifolia HOM05D004997 ORTHO05D005921 2.2e-39 166.0 105 81.0
CDE02G0055 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 1.1e-38 163.7 103 83.5
Thhalv10009093m.g Eutrema salsugineum HOM05D004997 ORTHO05D005921 1.1e-38 163.7 104 82.7
BcaB07g32600 Brassica carinata HOM05D004997 ORTHO05D005921 1.4e-38 163.3 105 81.0
A09p36530 Brassica napus HOM05D004997 ORTHO05D005921 1.4e-38 163.3 105 81.0
BraA09t39174Z Brassica rapa HOM05D004997 ORTHO05D005921 1.4e-38 163.3 105 81.0
CDE09G0791 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 1.8e-38 162.9 103 83.5
C05p28750 Brassica napus HOM05D004997 ORTHO05D005921 5.4e-38 161.4 105 80.0
BolC5t31593H Brassica oleracea HOM05D004997 ORTHO05D005921 5.4e-38 161.4 105 80.0
BcaB03g13847 Brassica carinata HOM05D004997 ORTHO05D005921 7.0e-38 161.0 104 84.6
vmacro04021 Vaccinium macrocarpon HOM05D004997 ORTHO05D005921 1.2e-37 160.2 88 94.3
Manes.11G058500 Manihot esculenta HOM05D004997 ORTHO05D005921 2.7e-37 159.1 87 94.3
PGR042G1500 Punica granatum HOM05D004997 ORTHO05D005921 3.5e-37 158.7 151 64.9
DCAR_027919 Daucus carota HOM05D000413 ORTHO05D000292 2.9e-36 155.6 87 94.3
SEGI_33388 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 6.6e-36 154.5 105 78.1
Atru.chr10.1243 Acer truncatum HOM05D004997 ORTHO05D005921 8.6e-36 154.1 87 92.0
COL.COLO4_31081 Corchorus olitorius HOM05D004997 ORTHO05D005921 8.6e-36 154.1 87 90.8
TPR.G13287 Trifolium pratense HOM05D004997 ORTHO05D005921 1.5e-35 153.3 87 90.8
A07p10100 Brassica napus HOM05D004997 ORTHO05D005921 1.9e-35 152.9 108 79.6
Ah.09g232610 Amaranthus hybridus HOM05D000413 ORTHO05D000292 2.5e-35 152.5 85 90.6
Os02g0246300 Oryza sativa ssp. japonica HOM05D004997 ORTHO05D005921 3.3e-35 152.1 99 77.8
QL05p058391 Quercus lobata HOM05D004997 ORTHO05D005921 4.3e-35 151.8 87 90.8
AUR62039776 Chenopodium quinoa HOM05D004997 ORTHO05D005921 2.8e-34 149.1 84 89.3
Gohir.D01G100600 Gossypium hirsutum HOM05D004997 ORTHO05D005921 6.1e-34 147.9 95 85.3
Duzib235G0692 Durio zibethinus HOM05D004997 ORTHO05D005921 1.0e-33 147.1 86 89.5
CsaV3_1G032650 Cucumis sativus L. HOM05D004997 ORTHO05D005921 1.4e-33 146.7 87 86.2
Gorai.002G125400 Gossypium raimondii HOM05D004997 ORTHO05D005921 5.2e-33 144.8 95 83.2
Phvul.009G128800 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 5.2e-33 144.8 87 89.7
CAN.G134.136 Capsicum annuum HOM05D004997 ORTHO05D005921 8.9e-33 144.1 85 84.7
arahy.Tifrunner.gnm1.ann1.FF119L Arachis hypogaea HOM05D004997 ORTHO05D005921 1.2e-32 143.7 94 81.9
CAN.G134.135 Capsicum annuum HOM05D004997 ORTHO05D000105 1.2e-32 143.7 85 84.7
Peaxi162Scf01211g00142 Petunia axillaris HOM05D004997 ORTHO05D005921 2.6e-32 142.5 88 86.4
Pp3c22_1770 Physcomitrium patens HOM05D004997 ORTHO05D005921 3.4e-32 142.1 102 69.6
AagrBONN_evm.TU.Sc2ySwM_344.2433 Anthoceros agrestis HOM05D004997 ORTHO05D005921 2.2e-31 139.4 105 67.6
ATR0743G157 Amborella trichopoda HOM05D004997 ORTHO05D005921 3.7e-31 138.7 85 83.5
BcaC05g27010 Brassica carinata HOM05D004997 ORTHO05D005921 6.4e-31 137.9 87 80.5
BraA07t28803Z Brassica rapa HOM05D004997 ORTHO05D005921 1.9e-30 136.3 93 78.5
Mapoly0006s0079 Marchantia polymorpha HOM05D004997 ORTHO05D005921 1.9e-30 136.3 103 68.0
Aa31LG6G5670 Aethionema arabicum HOM05D004997 ORTHO05D005921 3.2e-30 135.6 85 84.7
Gohir.D01G149300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 9.2e-30 134.0 95 80.0
EL10Ac8g19712 Beta vulgaris HOM05D004997 ORTHO05D005921 1.0e-28 130.6 138 56.5
Zm00001eb238610 Zea mays HOM05D004997 ORTHO05D005921 1.3e-28 130.2 99 71.7
C07p15580 Brassica napus HOM05D004997 ORTHO05D005921 1.9e-27 126.3 99 72.7
Oeu034156.1 Olea europaea HOM05D004997 ORTHO05D005921 7.3e-27 124.4 66 97.0
QL06p022817 Quercus lobata HOM05D004997 ORTHO05D005921 9.5e-27 124.0 83 78.3
Oeu052376.1 Olea europaea HOM05D004997 ORTHO05D005921 1.6e-26 123.2 66 95.5
SMO367G0874 Selaginella moellendorffii HOM05D004997 ORTHO05D005921 4.7e-26 121.7 87 67.8
arahy.Tifrunner.gnm1.ann1.7IX92P Arachis hypogaea HOM05D004997 ORTHO05D005921 1.4e-25 120.2 66 90.9
Dinv30737 Davidia involucrata HOM05D004997 ORTHO05D005921 1.4e-25 120.2 66 93.9
PGSC0003DMG400009647 Solanum tuberosum HOM05D004997 ORTHO05D005921 2.3e-25 119.4 66 89.4
Lsat_1_v5_gn_5_30841 Lactuca sativa HOM05D004997 ORTHO05D005921 4.0e-25 118.6 65 92.3
Nitab4.5_0010327g0020 Nicotiana tabacum HOM05D004997 ORTHO05D005921 5.2e-25 118.2 73 82.2
Sc17g0004940 Simmondsia chinensis HOM05D004997 ORTHO05D005921 5.2e-25 118.2 66 87.9
Nitab4.5_0000348g0240 Nicotiana tabacum HOM05D004997 ORTHO05D005921 6.8e-25 117.9 66 89.4
CDE02G2003 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 2.6e-24 115.9 66 89.4
SalBow8G3614 Salvia bowleyana HOM05D004997 ORTHO05D005921 4.4e-24 115.2 69 87.0
Haze_05586 Corylus avellana HOM05D004997 ORTHO05D005921 7.5e-24 114.4 80 78.8
CAN.G3523.1 Capsicum annuum HOM05D004997 ORTHO05D005921 9.8e-24 114.0 66 84.8
Sabra04G0085700 Salix brachista HOM05D004997 ORTHO05D005921 2.2e-23 112.8 63 92.1
Actinidia39569 Actinidia chinensis HOM05D004997 ORTHO05D005921 2.4e-22 109.4 105 64.8
CAN.G134.137 Capsicum annuum HOM05D004997 ORTHO05D005921 4.1e-22 108.6 69 78.3
AUR62030207 Chenopodium quinoa HOM05D004997 ORTHO05D005921 7.0e-22 107.8 61 90.2
SEGI_19850 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 9.2e-22 107.5 66 83.3
PRCOL_00000028 Prasinoderma coloniale HOM05D004997 ORTHO05D005921 5.6e-19 98.2 118 48.3
Zm00001eb258640 Zea mays HOM05D004997 ORTHO05D005921 1.6e-18 96.7 67 71.6
Zm00001eb151600 Zea mays HOM05D000394 ORTHO05D016690 3.6e-18 95.5 64 73.4
Zm00001eb310800 Zea mays HOM05D000394 ORTHO05D016690 1.1e-17 94.0 64 71.9
Zm00001eb139040 Zea mays HOM05D000901 ORTHO05D005921 3.1e-17 92.4 78 61.5
Zm00001eb225310 Zea mays HOM05D000901 ORTHO05D005921 6.8e-17 91.3 66 69.7
Zm00001eb269380 Zea mays HOM05D000901 ORTHO05D005921 1.2e-16 90.5 65 70.8
Manes.09G021201 Manihot esculenta HOM05D004997 ORTHO05D005921 9.9e-16 87.4 62 77.4
MCO01G210 Micromonas commoda HOM05D004997 ORTHO05D005921 9.9e-16 87.4 104 42.3
Zm00001eb344510 Zea mays HOM05D000901 ORTHO05D000768 9.9e-16 87.4 68 64.7
Haze_05599 Corylus avellana HOM05D004997 ORTHO05D005921 5.4e-14 81.6 51 84.3
Cre12.g502750 Chlamydomonas reinhardtii HOM05D004997 ORTHO05D005921 1.0e-12 77.4 99 40.4
arahy.Tifrunner.gnm1.ann1.MPJ1GQ Arachis hypogaea HOM05D004997 ORTHO05D005921 1.2e-08 63.9 39 89.7
Cfa022129 Carpinus fangiana HOM05D004997 ORTHO05D005921 1.7e-07 60.1 101 35.6
CBR_g48714 Chara braunii HOM05D004997 ORTHO05D005921 7.1e-06 54.7 102 38.2


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